Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 2.7e-125 452.2 261 100.0
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 1.6e-56 223.8 222 64.0
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 6.3e-50 201.8 226 56.6
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 6.3e-50 201.8 223 54.3
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 1.1e-49 201.1 231 55.0
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 1.6e-48 197.2 232 53.4
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 3.5e-48 196.1 223 58.3
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 1.3e-47 194.1 235 54.9
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 2.2e-47 193.4 223 52.5
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 2.9e-47 193.0 223 52.5
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 5.0e-47 192.2 228 54.8
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 8.5e-47 191.4 218 53.7
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 8.5e-47 191.4 233 53.6
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 1.5e-46 190.7 236 50.0
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 1.5e-46 190.7 227 51.5
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 1.5e-46 190.7 230 51.3
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 2.5e-46 189.9 176 62.5
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 2.5e-46 189.9 227 51.5
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 4.2e-46 189.1 224 54.0
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 4.2e-46 189.1 227 51.1
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 5.5e-46 188.7 224 54.0
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 9.4e-46 188.0 179 64.2
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 1.2e-45 187.6 241 49.4
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 2.1e-45 186.8 178 63.5
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 3.6e-45 186.0 218 52.8
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 4.7e-45 185.7 219 52.5
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 6.1e-45 185.3 241 49.8
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 8.0e-45 184.9 237 49.8
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.4e-44 184.1 162 63.6
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.4e-44 184.1 218 52.3
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 1.4e-44 184.1 238 55.0
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 1.8e-44 183.7 230 51.7
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 2.3e-44 183.3 218 51.8
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 3.0e-44 183.0 238 47.5
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 3.0e-44 183.0 229 49.8
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 5.2e-44 182.2 229 49.3
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 8.8e-44 181.4 222 52.7
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 8.8e-44 181.4 162 65.4
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 1.2e-43 181.0 216 56.5
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 1.5e-43 180.6 228 47.8
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 2.0e-43 180.3 236 55.9
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 7.5e-43 178.3 162 64.8
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 1.7e-42 177.2 162 64.2
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.7e-42 177.2 227 51.1
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 3.7e-42 176.0 230 54.8
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 3.7e-42 176.0 234 59.8
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 1.1e-41 174.5 167 61.7
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 1.8e-41 173.7 229 49.3
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 2.4e-41 173.3 168 60.1
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 7.0e-41 171.8 234 47.4
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 9.2e-41 171.4 237 48.1
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 1.2e-40 171.0 218 52.3
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 1.6e-40 170.6 241 52.3
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 1.6e-40 170.6 235 46.0
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 2.0e-40 170.2 236 47.5
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 2.0e-40 170.2 227 49.8
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.7e-40 169.9 217 47.5
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 4.5e-40 169.1 243 45.7
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 1.0e-39 167.9 250 46.0
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.3e-39 167.5 174 58.6
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 1.3e-39 167.5 218 50.5
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 2.3e-39 166.8 244 52.9
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 2.3e-39 166.8 244 52.9
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 5.0e-39 165.6 235 45.5
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 5.0e-39 165.6 246 46.3
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 1.5e-38 164.1 162 56.2
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 1.9e-38 163.7 254 50.0
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 1.9e-38 163.7 254 50.0
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 1.9e-38 163.7 254 50.0
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 2.5e-38 163.3 247 46.6
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 3.3e-38 162.9 225 48.0
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 7.3e-38 161.8 166 59.0
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 9.5e-38 161.4 235 45.1
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 2.8e-37 159.8 176 55.7
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 1.0e-36 157.9 246 44.7
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 1.4e-36 157.5 257 44.7
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 1.4e-36 157.5 257 44.7
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 1.4e-36 157.5 237 44.7
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 2.3e-36 156.8 222 48.6
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 3.0e-36 156.4 229 45.4
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 6.8e-36 155.2 217 54.4
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 3.4e-35 152.9 237 43.0
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 5.7e-35 152.1 228 47.8
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 1.7e-34 150.6 222 50.0
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 2.2e-34 150.2 227 46.3
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 3.7e-34 149.4 167 52.7
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 8.3e-34 148.3 227 49.8
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 8.3e-34 148.3 162 53.7
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 1.4e-33 147.5 172 52.3
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 2.4e-33 146.7 252 42.1
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 2.4e-33 146.7 221 45.7
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 7.0e-33 145.2 168 53.0
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 3.5e-32 142.9 217 44.2
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 7.8e-32 141.7 222 45.0
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 3.9e-31 139.4 169 48.5
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 1.5e-30 137.5 243 41.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 9.5e-30 134.8 231 39.8
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 4.7e-29 132.5 215 41.9
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 1.0e-28 131.3 252 39.7
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 4.0e-28 129.4 216 43.1
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.7e-24 116.7 196 40.8
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 1.2e-21 107.8 247 37.2
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 1.2e-21 107.8 182 41.8
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 2.1e-21 107.1 231 37.7
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 2.3e-20 103.6 123 49.6
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 1.9e-17 94.0 139 44.6
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 1.0e-15 88.2 65 67.7
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 6.6e-15 85.5 54 77.8
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 3.3e-14 83.2 51 80.4
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 3.6e-13 79.7 95 52.6
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 5.2e-12 75.9 123 41.5
Actinidia05202 Actinidia chinensis HOM05D006466 ORTHO05D008084 3.2e-09 66.6 87 46.0
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 3.5e-08 63.2 137 45.3
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 3.5e-08 63.2 137 45.3
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 1.9e-06 57.4 56 57.1


User provided reference genes

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