Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3441 Erigeron canadensis HOM05D005317 ORTHO05D005146 5.7e-100 367.5 171 100.0
Lsat_1_v5_gn_4_159841 Lactuca sativa HOM05D005317 ORTHO05D005146 2.1e-33 146.4 169 52.7
Lsat_1_v5_gn_3_86260 Lactuca sativa HOM05D005317 ORTHO05D005146 2.5e-18 96.3 135 43.7
ECA246G5098 Erigeron canadensis HOM05D005317 ORTHO05D005146 3.5e-17 92.4 155 38.7
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 5.0e-11 72.0 141 40.4
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 8.4e-11 71.2 137 35.8
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 3.2e-10 69.3 100 46.0
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.2e-10 69.3 140 37.1
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.2e-10 69.3 140 37.1
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 7.1e-10 68.2 144 29.9
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 3.5e-09 65.9 151 33.8
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.5e-09 65.9 140 36.4
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 3.5e-09 65.9 154 34.4
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 4.6e-09 65.5 139 32.4
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 1.3e-08 63.9 145 33.1
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 1.3e-08 63.9 134 33.6
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 1.8e-08 63.5 137 33.6
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.8e-08 63.5 173 31.8
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 2.3e-08 63.2 139 32.4
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 3.0e-08 62.8 173 32.4
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 3.0e-08 62.8 138 33.3
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 5.1e-08 62.0 154 34.4
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 5.1e-08 62.0 158 34.2
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 5.1e-08 62.0 153 32.7
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 6.7e-08 61.6 136 34.6
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 6.7e-08 61.6 169 33.7
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.7e-08 61.6 138 35.5
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 8.7e-08 61.2 148 31.8
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 1.5e-07 60.5 147 32.0
Rhsim08G0090500 Rhododendron simsii HOM05D005317 ORTHO05D005146 1.5e-07 60.5 156 33.3
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.5e-07 60.5 158 32.3
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 1.9e-07 60.1 149 33.6
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 1.9e-07 60.1 142 31.0
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 3.3e-07 59.3 147 34.0
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 4.3e-07 58.9 148 37.2
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 4.3e-07 58.9 153 32.7
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 5.7e-07 58.5 168 32.1
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 1.3e-06 57.4 189 31.2
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.3e-06 57.4 164 31.1
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 1.3e-06 57.4 91 39.6
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 1.6e-06 57.0 153 31.4
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.6e-06 57.0 145 34.5
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 3.7e-06 55.8 146 32.9
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 3.7e-06 55.8 109 33.9
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 3.7e-06 55.8 161 30.4
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 3.7e-06 55.8 140 33.6
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 3.7e-06 55.8 101 33.7
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 3.7e-06 55.8 169 29.0
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 3.7e-06 55.8 91 38.5
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 4.8e-06 55.5 150 35.3
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 4.8e-06 55.5 153 32.7
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 8.2e-06 54.7 132 31.1
Lsat_1_v5_gn_6_109661 Lactuca sativa HOM05D005065 ORTHO05D005944 8.2e-06 54.7 89 41.6


User provided reference genes

Program Settings