Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3401 Erigeron canadensis HOM05D001756 ORTHO05D001581 2.5e-37 158.3 82 100.0
HanXRQChr09g0255351 Helianthus annuus HOM05D001756 ORTHO05D001581 1.4e-19 99.4 84 72.6
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 7.4e-13 77.0 83 54.2
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 1.3e-12 76.3 83 56.6
HanXRQChr08g0233231 Helianthus annuus HOM05D001756 ORTHO05D001581 8.2e-12 73.6 83 59.0
Lsat_1_v5_gn_3_86460 Lactuca sativa HOM05D001756 ORTHO05D001581 8.2e-12 73.6 84 53.6
CSS0048277 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.5e-10 69.3 85 54.1
Eucgr.I00676 Eucalyptus grandis HOM05D001756 ORTHO05D001581 2.0e-10 68.9 84 48.8
CiPaw.02G001200 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.6e-10 68.6 86 51.2
Lj7A111T6 Lonicera japonica HOM05D001756 ORTHO05D001581 3.4e-10 68.2 82 53.7
Actinidia34539 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.8e-10 67.4 85 52.9
CSS0049317 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.8e-10 67.4 85 52.9
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 1.0e-09 66.6 84 47.6
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 1.7e-09 65.9 82 47.6
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 1.7e-09 65.9 82 47.6
Duzib147G1196 Durio zibethinus HOM05D001756 ORTHO05D001581 1.7e-09 65.9 87 47.1
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 1.7e-09 65.9 85 44.7
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.2e-09 65.5 85 49.4
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 2.2e-09 65.5 82 47.6
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 2.9e-09 65.1 82 47.6
ECA238G4790 Erigeron canadensis HOM05D001756 ORTHO05D001581 2.9e-09 65.1 83 51.8
Actinidia16413 Actinidia chinensis HOM05D001756 ORTHO05D001581 5.0e-09 64.3 78 50.0
ECA232G1256 Erigeron canadensis HOM05D000549 ORTHO05D008331 5.0e-09 64.3 69 55.1
FAN23G1434 Fragaria x ananassa HOM05D001756 ORTHO05D001581 5.0e-09 64.3 85 43.5
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 5.0e-09 64.3 84 51.2
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 6.5e-09 63.9 82 51.2
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 6.5e-09 63.9 84 50.0
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 8.4e-09 63.5 86 50.0
Actinidia11965 Actinidia chinensis HOM05D001756 ORTHO05D001581 1.1e-08 63.2 81 51.9
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 1.1e-08 63.2 87 49.4
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.9e-08 62.4 82 47.6
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.2e-08 61.6 85 42.4
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 3.2e-08 61.6 86 50.0
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 3.2e-08 61.6 83 48.2
Nitab4.5_0000142g0340 Nicotiana tabacum HOM05D001756 ORTHO05D001581 4.2e-08 61.2 89 46.1
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 4.2e-08 61.2 90 50.0
BcaB02g09903 Brassica carinata HOM05D001756 ORTHO05D001581 5.5e-08 60.8 84 50.0
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.5e-08 60.8 78 47.4
Nn6g34517 Nelumbo nucifera HOM05D001756 ORTHO05D001581 5.5e-08 60.8 87 47.1
arahy.Tifrunner.gnm1.ann1.F1MTJK Arachis hypogaea HOM05D001756 ORTHO05D001581 7.1e-08 60.5 83 43.4
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.1e-08 60.5 78 47.4
Duzib264G0169 Durio zibethinus HOM05D001756 ORTHO05D001581 7.1e-08 60.5 87 46.0
SalBow3G1129 Salvia bowleyana HOM05D001756 ORTHO05D001581 7.1e-08 60.5 82 45.1
CAN.G606.70 Capsicum annuum HOM05D001756 ORTHO05D001581 9.3e-08 60.1 84 45.2
Dinv44936 Davidia involucrata HOM05D001756 ORTHO05D001581 9.3e-08 60.1 82 51.2
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 9.3e-08 60.1 82 50.0
Eucgr.I02494 Eucalyptus grandis HOM05D001756 ORTHO05D001581 9.3e-08 60.1 84 46.4
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 9.3e-08 60.1 82 50.0
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 9.3e-08 60.1 82 50.0
Rhsim08G0091000 Rhododendron simsii HOM05D001756 ORTHO05D001581 9.3e-08 60.1 81 50.6
CARHR158860 Cardamine hirsuta HOM05D001756 ORTHO05D001581 1.2e-07 59.7 78 47.4
Duzib093G0345 Durio zibethinus HOM05D001756 ORTHO05D001581 1.2e-07 59.7 78 50.0
Thhalv10010875m.g Eutrema salsugineum HOM05D001756 ORTHO05D001581 1.2e-07 59.7 73 47.9
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.2e-07 59.7 79 45.6
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 1.2e-07 59.7 79 45.6
Medtr1g017700 Medicago truncatula HOM05D001756 ORTHO05D001581 1.2e-07 59.7 82 47.6
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 1.6e-07 59.3 85 45.9
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 1.6e-07 59.3 82 50.0
C08p24800 Brassica napus HOM05D001756 ORTHO05D001581 2.1e-07 58.9 77 46.8
COL.COLO4_11608 Corchorus olitorius HOM05D001756 ORTHO05D001581 2.1e-07 58.9 87 48.3
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 2.1e-07 58.9 79 50.6
vmacro18016 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 2.1e-07 58.9 84 48.8
A01p24530 Brassica napus HOM05D001756 ORTHO05D001581 2.7e-07 58.5 77 46.8
BraA01t02363Z Brassica rapa HOM05D001756 ORTHO05D001581 2.7e-07 58.5 77 46.8
CiPaw.01G002400 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.7e-07 58.5 86 45.3
COL.COLO4_28472 Corchorus olitorius HOM05D001756 ORTHO05D001581 2.7e-07 58.5 82 50.0
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 2.7e-07 58.5 83 47.0
Psat2g172320 Pisum sativum HOM05D001756 ORTHO05D001581 2.7e-07 58.5 78 42.3
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.7e-07 58.5 86 46.5
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 3.5e-07 58.2 85 43.5
Glyma.11G046000 Glycine max HOM05D001756 ORTHO05D001581 3.5e-07 58.2 76 42.1
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 4.6e-07 57.8 82 48.8
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 4.6e-07 57.8 79 41.8
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 4.6e-07 57.8 84 44.0
BolC8t50097H Brassica oleracea HOM05D001756 ORTHO05D001581 6.1e-07 57.4 77 45.5
CAN.G1239.6 Capsicum annuum HOM05D001756 ORTHO05D001581 6.1e-07 57.4 78 43.6
Cc02_g20030 Coffea canephora HOM05D001756 ORTHO05D001581 6.1e-07 57.4 88 50.0
Gohir.A12G078300 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.1e-07 57.4 86 43.0
Nitab4.5_0002525g0020 Nicotiana tabacum HOM05D001756 ORTHO05D001581 6.1e-07 57.4 79 46.8
QL12p038416 Quercus lobata HOM05D001756 ORTHO05D001581 6.1e-07 57.4 84 50.0
GSVIVG01004437001 Vitis vinifera HOM05D001756 ORTHO05D001581 6.1e-07 57.4 86 43.0
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 7.9e-07 57.0 85 45.9
BcaB05g23153 Brassica carinata HOM05D001756 ORTHO05D001581 7.9e-07 57.0 69 52.2
CSS0026516 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.9e-07 57.0 78 48.7
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 7.9e-07 57.0 88 45.5
Gohir.D05G214800 Gossypium hirsutum HOM05D001756 ORTHO05D001581 7.9e-07 57.0 82 51.2
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 7.9e-07 57.0 82 45.1
arahy.Tifrunner.gnm1.ann1.22FXNP Arachis hypogaea HOM05D001756 ORTHO05D001581 1.0e-06 56.6 83 42.2
BcaC07g39442 Brassica carinata HOM05D001756 ORTHO05D001581 1.0e-06 56.6 67 47.8
C01p30590 Brassica napus HOM05D001756 ORTHO05D001581 1.0e-06 56.6 77 45.5
BolC1t02995H Brassica oleracea HOM05D001756 ORTHO05D001581 1.0e-06 56.6 77 45.5
Duzib187G0009 Durio zibethinus HOM05D001756 ORTHO05D001581 1.0e-06 56.6 87 47.1
Glyma.10G255800 Glycine max HOM05D001756 ORTHO05D001581 1.0e-06 56.6 76 43.4
Glyma.20G135700 Glycine max HOM05D001756 ORTHO05D001581 1.0e-06 56.6 76 43.4
Gohir.A05G211500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.0e-06 56.6 82 51.2
Manes.13G109600 Manihot esculenta HOM05D001756 ORTHO05D001581 1.0e-06 56.6 82 42.7
Nitab4.5_0001099g0060 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.0e-06 56.6 78 50.0
Peaxi162Scf00016g03021 Petunia axillaris HOM05D001756 ORTHO05D001581 1.0e-06 56.6 83 42.2
Sopen02g036700 Solanum pennellii HOM05D001756 ORTHO05D001581 1.0e-06 56.6 84 45.2
PGSC0003DMG400021406 Solanum tuberosum HOM05D001756 ORTHO05D001581 1.0e-06 56.6 89 43.8
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.0e-06 56.6 38 65.8
HPP92_007708 Vanilla planifolia HOM05D001756 ORTHO05D001581 1.0e-06 56.6 78 48.7
Atru.chr3.1054 Acer truncatum HOM05D001756 ORTHO05D001581 1.3e-06 56.2 80 42.5
BcaB01g00674 Brassica carinata HOM05D001756 ORTHO05D001581 1.3e-06 56.2 67 47.8
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 1.3e-06 56.2 84 47.6
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.3e-06 56.2 83 45.8
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 1.3e-06 56.2 89 42.7
Gohir.D11G210700 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.3e-06 56.2 90 43.3
Gorai.007G226000 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.3e-06 56.2 90 43.3
Gorai.008G085100 Gossypium raimondii HOM05D001756 ORTHO05D001581 1.3e-06 56.2 86 44.2
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 1.3e-06 56.2 87 42.5
Sabra16G0181600 Salix brachista HOM05D001756 ORTHO05D001581 1.3e-06 56.2 82 43.9
CiPaw.07G172800 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.8e-06 55.8 78 51.3
Ciclev10026870m.g Citrus clementina HOM05D001756 ORTHO05D001581 1.8e-06 55.8 82 47.6
CsaV3_6G044290 Cucumis sativus L. HOM05D001756 ORTHO05D001581 1.8e-06 55.8 75 46.7
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 1.8e-06 55.8 86 43.0
Gohir.D12G076500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 1.8e-06 55.8 86 44.2
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 1.8e-06 55.8 86 45.3
Sp5g12310 Schrenkiella parvula HOM05D001756 ORTHO05D001581 1.8e-06 55.8 76 50.0
Solyc02g092110.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 1.8e-06 55.8 89 43.8
AL5G29770 Arabidopsis lyrata HOM05D001756 ORTHO05D001581 2.3e-06 55.5 82 42.7
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.3e-06 55.5 79 45.6
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 2.3e-06 55.5 83 48.2
Glyma.01G195700 Glycine max HOM05D001756 ORTHO05D001581 2.3e-06 55.5 76 42.1
HanXRQChr09g0255341 Helianthus annuus HOM05D001756 ORTHO05D001581 2.3e-06 55.5 83 45.8
Lsat_1_v5_gn_2_80201 Lactuca sativa HOM05D001756 ORTHO05D001581 2.3e-06 55.5 49 55.1
Medtr1g106030 Medicago truncatula HOM05D001756 ORTHO05D001581 2.3e-06 55.5 40 60.0
Potri.009G085600 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.3e-06 55.5 84 41.7
Sopen04g031220 Solanum pennellii HOM05D001756 ORTHO05D001581 2.3e-06 55.5 85 45.9
AUR62004029 Chenopodium quinoa HOM05D001756 ORTHO05D001581 3.0e-06 55.1 82 45.1
FvH4_1g18100 Fragaria vesca HOM05D001756 ORTHO05D001581 3.0e-06 55.1 36 63.9
Manes.18G048700 Manihot esculenta HOM05D001756 ORTHO05D001581 3.0e-06 55.1 83 44.6
A09p42920 Brassica napus HOM05D001756 ORTHO05D001581 3.9e-06 54.7 79 45.6
BraA09t39759Z Brassica rapa HOM05D001756 ORTHO05D001581 3.9e-06 54.7 79 45.6
CSS0036107 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 3.9e-06 54.7 78 46.2
Nitab4.5_0009491g0010 Nicotiana tabacum HOM05D001756 ORTHO05D001581 3.9e-06 54.7 84 48.8
PSO675G3090 Papaver somniferum HOM05D001756 ORTHO05D001581 3.9e-06 54.7 80 37.5
Phvul.007G047000 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 3.9e-06 54.7 73 45.2
AT3G49780 Arabidopsis thaliana HOM05D001756 ORTHO05D001581 5.1e-06 54.3 82 42.7
BolC3t18241H Brassica oleracea HOM05D001756 ORTHO05D001581 5.1e-06 54.3 82 46.3
CSS0014839 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.1e-06 54.3 80 43.8
CSS0047712 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.1e-06 54.3 80 43.8
ClCG01G017770 Citrullus lanatus HOM05D001756 ORTHO05D001581 5.1e-06 54.3 89 41.6
FAN19G1808 Fragaria x ananassa HOM05D001756 ORTHO05D001581 5.1e-06 54.3 64 40.6
Gorai.009G221500 Gossypium raimondii HOM05D001756 ORTHO05D001581 5.1e-06 54.3 82 50.0
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 5.1e-06 54.3 83 48.2
Sc15g0005410 Simmondsia chinensis HOM05D001756 ORTHO05D001581 5.1e-06 54.3 80 47.5
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 5.1e-06 54.3 81 44.4
BcaC01g02826 Brassica carinata HOM05D001756 ORTHO05D001581 6.7e-06 53.9 82 46.3
FvH4_2g03340 Fragaria vesca HOM05D001756 ORTHO05D001581 6.7e-06 53.9 80 43.8
Gohir.A11G212500 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.7e-06 53.9 89 43.8
MD05G1105500 Malus domestica HOM05D001756 ORTHO05D001581 6.7e-06 53.9 88 43.2
Medtr5g015140 Medicago truncatula HOM05D001756 ORTHO05D001581 6.7e-06 53.9 82 41.5
Sabra09G0065700 Salix brachista HOM05D001756 ORTHO05D001581 6.7e-06 53.9 87 42.5
PGSC0003DMG400004941 Solanum tuberosum HOM05D001756 ORTHO05D001581 6.7e-06 53.9 81 44.4
BcaC09g49971 Brassica carinata HOM05D001756 ORTHO05D001581 8.7e-06 53.5 67 46.3
Carub.0005s1613 Capsella rubella HOM05D001756 ORTHO05D001581 8.7e-06 53.5 77 45.5
Hma1.2p1_0210F.1_g089330 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 8.7e-06 53.5 81 44.4
Oeu025312.1 Olea europaea HOM05D001756 ORTHO05D001581 8.7e-06 53.5 87 46.0
Phvul.003G233400 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 8.7e-06 53.5 74 44.6
Psat6g214400 Pisum sativum HOM05D001756 ORTHO05D001581 8.7e-06 53.5 78 46.2
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 8.7e-06 53.5 77 36.4
Sp2g28960 Schrenkiella parvula HOM05D001756 ORTHO05D001581 8.7e-06 53.5 84 46.4


User provided reference genes

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