Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 5.3e-159 564.3 283 100.0
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 9.3e-132 473.8 285 81.4
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 1.9e-129 466.1 285 80.7
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 9.7e-113 410.6 288 71.2
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 4.5e-110 401.7 286 71.3
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 7.7e-110 401.0 274 71.5
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 3.8e-109 398.7 291 69.8
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 3.2e-108 395.6 282 68.8
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 7.2e-108 394.4 274 71.5
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 7.2e-108 394.4 273 70.7
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 6.1e-107 391.3 282 68.4
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 6.1e-107 391.3 287 69.3
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 6.1e-107 391.3 287 68.6
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 8.0e-107 391.0 286 70.3
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 2.3e-106 389.4 285 68.8
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 8.8e-106 387.5 291 68.7
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 1.2e-105 387.1 282 68.8
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 1.2e-105 387.1 279 68.5
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 2.0e-105 386.3 280 67.9
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 5.7e-105 384.8 284 68.0
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 9.7e-105 384.0 273 70.7
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 2.2e-104 382.9 296 67.9
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 2.8e-104 382.5 276 67.8
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 2.8e-104 382.5 280 67.5
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 3.7e-104 382.1 289 68.9
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.1e-103 380.6 282 68.4
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 5.3e-103 378.3 293 64.8
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 7.0e-103 377.9 274 69.0
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 1.2e-102 377.1 272 68.4
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.2e-102 377.1 272 68.4
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 1.6e-102 376.7 287 66.6
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 2.0e-102 376.3 293 64.8
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.7e-102 375.9 273 70.0
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 2.7e-102 375.9 283 67.1
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 1.3e-101 373.6 290 64.8
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 1.7e-101 373.2 289 67.1
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 2.9e-101 372.5 291 66.7
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 5.0e-101 371.7 272 68.4
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 8.5e-101 370.9 274 67.2
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 8.5e-101 370.9 272 66.9
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.9e-100 369.8 276 65.9
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 2.5e-100 369.4 270 67.8
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 3.2e-100 369.0 289 66.8
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 4.2e-100 368.6 281 65.5
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 7.2e-100 367.9 276 67.0
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 6.1e-99 364.8 275 65.8
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 2.3e-98 362.8 274 65.7
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 2.3e-98 362.8 277 66.1
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 6.8e-98 361.3 274 64.2
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 8.8e-98 360.9 279 64.5
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 1.2e-97 360.5 288 63.9
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 1.5e-97 360.1 280 65.7
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 4.4e-97 358.6 273 65.2
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 4.4e-97 358.6 301 63.1
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 1.7e-96 356.7 277 65.3
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 2.2e-96 356.3 283 63.6
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.8e-95 353.2 276 64.9
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.4e-95 352.8 329 57.1
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 5.4e-95 351.7 289 61.6
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.2e-94 350.5 320 58.4
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 1.6e-94 350.1 320 58.1
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 4.5e-94 348.6 273 62.6
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 1.7e-93 346.7 278 61.9
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 3.6e-91 339.0 273 61.2
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 1.4e-90 337.0 280 62.9
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 5.2e-90 335.1 273 60.1
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 8.9e-90 334.3 286 58.0
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 1.2e-89 334.0 210 76.7
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 7.5e-89 331.3 273 60.4
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 7.5e-89 331.3 273 60.4
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 3.7e-88 328.9 273 60.4
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 4.9e-88 328.6 273 60.1
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 8.3e-88 327.8 247 64.4
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 3.1e-87 325.9 273 59.7
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 5.4e-87 325.1 247 64.8
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 2.0e-86 323.2 277 59.6
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 4.3e-84 315.5 209 71.3
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 1.2e-83 313.9 249 63.5
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 6.8e-82 308.1 238 66.0
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.2e-81 307.4 225 68.4
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.2e-81 307.4 287 56.4
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 9.8e-81 304.3 197 74.1
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 1.3e-80 303.9 273 57.5
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 2.9e-80 302.8 271 59.8
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 5.4e-79 298.5 209 66.5
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 7.8e-78 294.7 230 61.3
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 1.2e-75 287.3 239 61.5
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 8.0e-75 284.6 261 55.9
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.5e-73 280.4 234 59.8
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 3.9e-69 265.8 225 57.8
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 4.4e-65 252.3 183 68.9
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 6.4e-64 248.4 222 58.1
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 2.7e-62 243.0 194 62.4
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 7.3e-60 235.0 229 57.2
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 8.1e-59 231.5 168 69.6
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.1e-54 216.9 179 60.3
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 5.1e-53 212.2 178 62.9
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 1.9e-52 210.3 133 78.2
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 5.6e-52 208.8 214 53.3
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 4.2e-47 192.6 160 60.0
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 5.1e-45 185.7 176 56.2
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 1.1e-44 184.5 305 39.7
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 2.8e-43 179.9 237 45.6
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 8.4e-40 168.3 141 60.3
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 1.9e-39 167.2 105 75.2
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 2.7e-38 163.3 100 76.0
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 7.9e-38 161.8 101 77.2
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 7.4e-36 155.2 129 61.2
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 9.6e-36 154.8 130 60.8
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.0e-29 134.8 104 61.5
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 5.1e-29 132.5 98 66.3
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 2.1e-27 127.1 83 73.5
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 2.8e-27 126.7 97 60.8
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 4.0e-26 122.9 101 59.4
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 1.9e-23 114.0 103 57.3
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 1.1e-20 104.8 233 32.2
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 4.3e-20 102.8 123 48.0
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 1.4e-18 97.8 98 56.1
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.9e-15 87.4 84 52.4
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 2.7e-14 83.6 50 74.0
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 7.9e-14 82.0 65 58.5
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.9e-13 79.7 68 54.4
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 1.1e-12 78.2 65 61.5
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-12 77.8 97 45.4
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 2.4e-10 70.5 54 63.0


User provided reference genes

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