Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 5.3e-182 641.0 342 100.0
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 1.1e-137 493.8 344 79.7
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 2.6e-128 462.6 341 63.3
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 5.4e-126 454.9 356 61.8
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 9.3e-126 454.1 347 61.4
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 1.6e-125 453.4 346 63.0
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 2.1e-125 453.0 344 63.1
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 7.8e-125 451.1 347 62.2
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 7.8e-125 451.1 345 61.7
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 1.7e-124 449.9 349 65.3
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 6.6e-124 448.0 341 61.6
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 1.5e-123 446.8 341 59.5
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 2.5e-123 446.0 344 61.6
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 2.8e-122 442.6 356 62.1
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 2.4e-121 439.5 348 59.8
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 2.6e-120 436.0 345 58.8
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 5.8e-120 434.9 345 58.8
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 6.4e-119 431.4 345 59.4
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 8.4e-119 431.0 350 64.6
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 4.2e-118 428.7 345 59.7
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 7.1e-118 427.9 345 69.6
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 1.2e-117 427.2 350 64.0
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 1.2e-117 427.2 348 59.5
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 2.7e-117 426.0 351 59.3
HanXRQChr09g0272091 Helianthus annuus HOM05D005549 ORTHO05D006771 3.5e-117 425.6 273 86.4
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 3.9e-116 422.2 345 58.6
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 3.9e-116 422.2 345 58.6
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 5.1e-116 421.8 347 58.2
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 6.7e-116 421.4 347 66.0
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 6.7e-116 421.4 345 59.7
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 1.5e-115 420.2 348 58.9
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.9e-115 419.9 349 61.3
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 3.3e-115 419.1 347 58.5
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 4.3e-115 418.7 345 58.3
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 4.3e-115 418.7 347 57.3
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 7.4e-115 417.9 347 63.1
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 7.4e-115 417.9 347 57.6
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 9.6e-115 417.5 348 63.2
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 9.6e-115 417.5 344 63.7
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 1.6e-114 416.8 345 68.1
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 1.6e-114 416.8 346 64.2
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 2.1e-114 416.4 397 52.9
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 2.1e-114 416.4 345 68.1
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 2.8e-114 416.0 345 61.7
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 2.8e-114 416.0 351 63.5
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 3.7e-114 415.6 342 64.0
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 3.7e-114 415.6 341 61.0
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 8.1e-114 414.5 347 57.6
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 1.1e-113 414.1 350 66.3
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 1.4e-113 413.7 345 63.2
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 2.4e-113 412.9 346 57.8
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 2.4e-113 412.9 346 58.7
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 9.0e-113 411.0 345 63.5
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 2.6e-112 409.5 340 56.5
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 4.5e-112 408.7 347 63.4
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 5.8e-112 408.3 344 63.4
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 1.3e-111 407.1 348 58.3
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 1.7e-111 406.8 345 62.3
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 2.9e-111 406.0 348 62.6
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 4.9e-111 405.2 345 62.6
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 8.4e-111 404.4 347 57.6
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 4.2e-110 402.1 345 61.7
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 4.2e-110 402.1 346 62.4
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 2.1e-109 399.8 351 55.3
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 6.0e-109 398.3 346 57.5
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 1.8e-108 396.7 345 56.5
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 3.9e-108 395.6 346 56.9
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 8.7e-108 394.4 317 65.6
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.5e-107 393.7 345 57.1
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 4.3e-107 392.1 345 60.0
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.3e-106 390.6 339 56.9
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 2.1e-106 389.8 346 52.9
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 2.8e-106 389.4 345 54.8
ECA232G2898 Erigeron canadensis HOM05D005549 ORTHO05D006771 2.8e-106 389.4 224 99.6
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.1e-105 387.5 345 55.7
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 1.4e-105 387.1 345 62.0
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.8e-105 386.7 334 56.9
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 5.3e-105 385.2 345 62.9
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 9.0e-105 384.4 342 62.6
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 3.4e-104 382.5 344 52.3
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 1.7e-103 380.2 346 52.6
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 6.5e-103 378.3 343 58.0
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 1.4e-102 377.1 347 54.5
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 1.9e-102 376.7 340 60.9
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 1.9e-102 376.7 340 60.9
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 1.9e-102 376.7 340 60.9
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 2.5e-102 376.3 340 62.6
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 5.5e-102 375.2 340 60.3
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 7.1e-102 374.8 344 52.9
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 1.6e-101 373.6 344 53.5
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 4.6e-101 372.1 344 52.3
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 2.8e-98 362.8 344 63.1
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 2.6e-96 356.3 348 51.7
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 4.5e-96 355.5 325 59.4
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 5.5e-94 348.6 343 51.6
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 2.3e-92 343.2 341 51.0
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 1.9e-91 340.1 349 50.1
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 4.8e-90 335.5 347 49.6
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 2.4e-89 333.2 344 52.6
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 5.0e-79 298.9 339 45.1
Cpa.g.c31519.1 Carica papaya HOM05D005549 ORTHO05D006771 1.3e-74 284.3 240 52.5
arahy.Tifrunner.gnm1.ann1.BVT45G Arachis hypogaea HOM05D005549 ORTHO05D006771 4.5e-72 275.8 218 66.5
Solyc05g012300.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 9.4e-70 268.1 222 56.3
Potri.012G087300 Populus trichocarpa HOM05D005549 ORTHO05D006771 2.1e-69 266.9 223 53.8
Glyma.08G230900 Glycine max HOM05D005549 ORTHO05D006771 4.7e-69 265.8 222 64.4
Solyc05g012320.1 Solanum lycopersicum HOM05D005549 ORTHO05D006771 4.7e-69 265.8 222 55.4
HanXRQChr04g0107691 Helianthus annuus HOM05D005549 ORTHO05D006771 8.0e-69 265.0 182 89.0
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 8.8e-68 261.5 343 39.1
arahy.Tifrunner.gnm1.ann1.8228C9 Arachis hypogaea HOM05D005549 ORTHO05D006771 2.6e-67 260.0 209 66.0
arahy.Tifrunner.gnm1.ann1.DCL1V8 Arachis hypogaea HOM05D005549 ORTHO05D006771 2.6e-67 260.0 209 66.0
Atru.chr9.2510 Acer truncatum HOM05D005549 ORTHO05D006771 4.8e-66 255.8 209 57.4
AUR62030941 Chenopodium quinoa HOM05D005549 ORTHO05D006771 1.4e-65 254.2 220 55.9
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 1.2e-64 251.1 380 35.5
HanXRQChr16g0506951 Helianthus annuus HOM05D005549 ORTHO05D006771 2.2e-63 246.9 199 63.8
CSS0043757 Camellia sinensis var. sinensis HOM05D005549 ORTHO05D006771 1.6e-61 240.7 222 54.1
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 1.4e-60 237.7 341 40.5
ATR0807G008 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.1e-57 228.0 221 46.6
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 3.1e-57 226.5 373 34.6
Peaxi162Scf00141g10027 Petunia axillaris HOM05D005549 ORTHO05D006771 7.0e-57 225.3 185 55.7
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 5.5e-54 215.7 184 59.8
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.3e-52 210.3 184 58.7
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 1.3e-47 194.5 205 50.7
MD06G1171300 Malus domestica HOM05D005549 ORTHO05D006771 1.6e-45 187.6 315 38.1
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 8.6e-39 165.2 509 27.1
Eucgr.H00387 Eucalyptus grandis HOM05D005549 ORTHO05D006771 1.6e-37 161.0 204 42.2
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 2.3e-36 157.1 105 71.4
Cre10.g434300 Chlamydomonas reinhardtii HOM05D005549 ORTHO05D006771 2.6e-27 127.1 253 37.2
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 6.4e-26 122.5 102 57.8
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 9.2e-25 118.6 86 67.4
Gohir.D12G085501 Gossypium hirsutum HOM05D005549 ORTHO05D006771 2.1e-24 117.5 141 46.1
MCO16G545 Micromonas commoda HOM05D005549 ORTHO05D006771 4.6e-24 116.3 427 25.5
PRCOL_00001377 Prasinoderma coloniale HOM05D005549 ORTHO05D006771 3.9e-23 113.2 348 29.6
TPR.G8752 Trifolium pratense HOM05D005549 ORTHO05D006771 6.6e-23 112.5 84 54.8
Sabra12G0062500 Salix brachista HOM05D005549 ORTHO05D006771 1.5e-22 111.3 95 57.9
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 2.9e-18 97.1 96 53.1
MD14G1177000 Malus domestica HOM05D005549 ORTHO05D006771 1.9e-17 94.4 67 58.2
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.1e-13 80.9 100 49.0
Os11g0660300 Oryza sativa ssp. japonica HOM05D005151 ORTHO05D006322 4.3e-06 56.6 153 21.6


User provided reference genes

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