Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 7.0e-124 447.2 211 100.0
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 7.0e-116 420.6 211 93.4
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 5.9e-115 417.5 209 94.7
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 1.9e-105 386.0 211 85.8
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 9.5e-105 383.6 211 84.8
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 4.0e-103 378.3 208 83.7
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 1.7e-101 372.9 209 81.3
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 2.2e-101 372.5 208 82.2
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 6.4e-101 370.9 209 82.3
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 8.3e-101 370.5 208 81.7
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 1.4e-100 369.8 208 80.8
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 2.4e-100 369.0 208 79.8
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 2.4e-100 369.0 208 82.2
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.2e-100 368.6 208 80.8
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 4.1e-100 368.2 208 82.2
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 7.0e-100 367.5 206 81.1
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 1.2e-99 366.7 208 79.3
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 1.2e-99 366.7 209 81.3
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 2.0e-99 365.9 208 79.8
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 3.5e-99 365.2 208 81.2
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 3.5e-99 365.2 208 81.2
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 3.5e-99 365.2 208 78.8
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 4.6e-99 364.8 208 79.3
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 4.6e-99 364.8 211 79.1
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 6.0e-99 364.4 208 79.3
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 6.0e-99 364.4 208 81.2
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 1.0e-98 363.6 208 81.2
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 1.3e-98 363.2 208 78.4
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 1.7e-98 362.8 209 79.4
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.3e-98 362.5 208 81.2
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 2.3e-98 362.5 208 80.8
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 3.0e-98 362.1 208 80.3
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 3.0e-98 362.1 208 78.8
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 3.9e-98 361.7 208 80.3
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 5.0e-98 361.3 208 81.2
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 5.0e-98 361.3 209 77.0
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 6.6e-98 360.9 204 81.4
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 1.1e-97 360.1 201 80.6
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 1.5e-97 359.8 208 77.9
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 2.5e-97 359.0 208 77.9
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 9.5e-97 357.1 208 78.4
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.2e-96 356.7 208 79.8
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 1.6e-96 356.3 198 81.8
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 2.1e-96 355.9 208 78.8
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.8e-96 355.5 208 78.8
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 2.8e-96 355.5 208 79.3
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 2.8e-96 355.5 208 77.4
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 2.8e-96 355.5 208 77.9
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 3.6e-96 355.1 206 79.6
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 4.7e-96 354.8 208 76.4
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 4.7e-96 354.8 208 76.9
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 8.0e-96 354.0 208 75.0
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 1.4e-95 353.2 208 76.9
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 2.3e-95 352.4 231 71.4
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 2.3e-95 352.4 208 76.4
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 3.1e-95 352.1 203 78.8
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 4.0e-95 351.7 209 78.0
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 5.2e-95 351.3 208 76.4
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 8.9e-95 350.5 206 76.2
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 8.9e-95 350.5 208 76.0
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 2.0e-94 349.4 208 77.9
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.6e-94 349.0 203 78.3
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 3.4e-94 348.6 206 76.2
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 4.4e-94 348.2 207 75.8
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 5.8e-94 347.8 201 78.1
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 5.8e-94 347.8 203 77.8
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 5.8e-94 347.8 203 77.8
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 7.5e-94 347.4 209 76.1
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 1.3e-93 346.7 211 74.9
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 1.7e-93 346.3 206 77.7
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 2.9e-93 345.5 206 75.2
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 3.7e-93 345.1 199 78.4
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 3.7e-93 345.1 208 76.0
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 6.4e-93 344.4 206 75.2
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 6.4e-93 344.4 208 76.0
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 1.1e-92 343.6 203 76.8
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.1e-92 343.6 208 76.0
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 1.4e-92 343.2 210 73.3
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 2.4e-92 342.4 208 75.5
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 2.4e-92 342.4 206 75.2
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 3.2e-92 342.0 193 80.8
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 3.2e-92 342.0 228 71.1
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 4.1e-92 341.7 208 74.5
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 4.1e-92 341.7 208 75.5
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 7.1e-92 340.9 208 75.5
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 9.2e-92 340.5 210 74.3
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 9.2e-92 340.5 208 75.0
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 1.2e-91 340.1 204 76.0
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.2e-91 340.1 208 74.0
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 2.1e-91 339.3 206 73.8
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 2.7e-91 339.0 208 72.6
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 3.5e-91 338.6 209 73.2
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 3.5e-91 338.6 210 74.8
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 4.6e-91 338.2 204 75.5
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 7.8e-91 337.4 204 76.0
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 7.8e-91 337.4 204 75.5
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 7.8e-91 337.4 206 73.8
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 1.0e-90 337.0 206 73.8
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 1.7e-90 336.3 202 75.7
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 1.7e-90 336.3 208 75.0
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 2.3e-90 335.9 206 73.8
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 2.3e-90 335.9 220 74.1
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 6.6e-90 334.3 210 73.3
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 1.5e-89 333.2 202 74.3
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 1.9e-89 332.8 209 71.8
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 3.6e-88 328.6 207 70.5
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 3.6e-88 328.6 206 72.3
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 1.8e-87 326.2 201 71.6
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 4.0e-87 325.1 207 70.5
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 5.2e-87 324.7 202 72.3
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.5e-86 323.2 202 72.3
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 1.4e-84 316.6 209 71.3
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 1.4e-84 316.6 202 69.8
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 5.4e-84 314.7 294 55.4
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 1.2e-83 313.5 248 63.7
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 6.6e-82 307.8 204 70.6
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 1.9e-81 306.2 166 83.1
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 2.4e-79 299.3 173 79.8
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 2.9e-77 292.4 174 78.2
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 1.7e-66 256.5 424 38.4
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 1.7e-66 256.5 208 60.6
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-65 253.4 145 77.2
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 6.2e-64 248.1 172 68.0
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 1.4e-63 246.9 145 75.2
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 2.0e-62 243.0 145 73.8
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 6.9e-55 218.0 139 71.2
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 6.0e-51 204.9 113 81.4
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 3.3e-49 199.1 189 49.7
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 3.4e-46 189.1 200 48.0
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 9.3e-44 181.0 125 67.2
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 5.7e-41 171.8 195 44.6
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 1.1e-39 167.5 108 74.1
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 5.9e-38 161.8 88 81.8
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 5.5e-36 155.2 140 54.3
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 1.8e-34 150.2 96 74.0
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 5.7e-33 145.2 74 86.5
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 1.4e-31 140.6 95 69.5
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 5.5e-28 128.6 79 74.7
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 3.8e-21 105.9 76 63.2
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 3.8e-21 105.9 64 75.0
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 3.6e-19 99.4 65 69.2
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 3.3e-17 92.8 58 74.1
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.2e-16 90.1 57 75.4
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 3.6e-11 72.8 35 91.4
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 4.7e-11 72.4 35 85.7
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 2.8e-08 63.2 59 59.3
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 1.1e-07 61.2 40 72.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.2e-06 57.8 32 78.1


User provided reference genes

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