Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2894 Erigeron canadensis HOM05D003923 ORTHO05D004553 1.1e-190 669.8 354 100.0
HanXRQChr15g0491381 Helianthus annuus HOM05D003923 ORTHO05D004553 2.6e-107 392.9 357 68.1
Lsat_1_v5_gn_9_43840 Lactuca sativa HOM05D003923 ORTHO05D004553 1.0e-98 364.4 354 63.0
Oeu024542.1 Olea europaea HOM05D003923 ORTHO05D004553 8.8e-79 298.1 357 50.7
QL12p036407 Quercus lobata HOM05D003923 ORTHO05D004553 1.6e-75 287.3 370 51.9
CSS0021337 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 2.9e-74 283.1 359 52.4
FAN13G1718 Fragaria x ananassa HOM05D003923 ORTHO05D004553 5.0e-74 282.3 363 47.9
CSS0001866 Camellia sinensis var. sinensis HOM05D003923 ORTHO05D004553 1.5e-73 280.8 364 50.8
Cc10_g07380 Coffea canephora HOM05D003923 ORTHO05D004553 1.9e-73 280.4 378 52.9
FAN18G1313 Fragaria x ananassa HOM05D003923 ORTHO05D004553 1.9e-73 280.4 362 50.0
Rhsim06G0083500 Rhododendron simsii HOM05D003923 ORTHO05D004553 2.7e-72 276.6 386 48.7
RcHm_v2.0_Chr7g0239471 Rosa chinensis HOM05D003923 ORTHO05D004553 4.7e-72 275.8 367 49.0
CiPaw.08G044000 Carya illinoinensis HOM05D003923 ORTHO05D004553 5.2e-71 272.3 362 52.2
FAN08G0462 Fragaria x ananassa HOM05D003923 ORTHO05D004553 6.7e-71 271.9 363 46.8
FvH4_5g37730 Fragaria vesca HOM05D003923 ORTHO05D004553 8.8e-71 271.6 362 48.6
Manes.18G068600 Manihot esculenta HOM05D003923 ORTHO05D004553 1.5e-70 270.8 369 49.9
Haze_22250 Corylus avellana HOM05D003923 ORTHO05D004553 5.7e-70 268.9 356 51.4
FAN04G1592 Fragaria x ananassa HOM05D003923 ORTHO05D004553 9.7e-70 268.1 376 46.3
Oeu061492.1 Olea europaea HOM05D003923 ORTHO05D004553 1.7e-69 267.3 369 49.6
Cfa013623 Carpinus fangiana HOM05D003923 ORTHO05D004553 2.2e-69 266.9 356 49.7
Hma1.2p1_0120F.1_g057290 Hydrangea macrophylla HOM05D003923 ORTHO05D004553 2.2e-69 266.9 359 51.8
ECA246G1087 Erigeron canadensis HOM05D003923 ORTHO05D004553 2.8e-69 266.5 358 48.6
TWI56G0888 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 2.8e-69 266.5 360 52.2
Lalb_Chr08g0241981 Lupinus albus HOM05D003923 ORTHO05D004553 3.7e-69 266.2 358 51.7
Thecc.08G109100 Theobroma cacao HOM05D003923 ORTHO05D004553 1.4e-68 264.2 361 50.1
Gohir.A05G227800 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.8e-68 263.8 370 46.8
CiPaw.07G181200 Carya illinoinensis HOM05D003923 ORTHO05D004553 2.4e-68 263.5 357 49.6
TWI12G0076 Tripterygium wilfordii HOM05D003923 ORTHO05D004553 2.4e-68 263.5 366 49.2
Potri.002G094700 Populus trichocarpa HOM05D003923 ORTHO05D004553 3.1e-68 263.1 363 49.6
Gorai.009G238400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.2e-67 261.2 365 46.6
Medtr3g074210 Medicago truncatula HOM05D003923 ORTHO05D004553 2.7e-67 260.0 370 48.9
Peaxi162Scf00041g01015 Petunia axillaris HOM05D003923 ORTHO05D004553 5.9e-67 258.8 359 47.1
Gohir.D05G230200 Gossypium hirsutum HOM05D003923 ORTHO05D004553 7.7e-67 258.5 364 46.2
TAR628G1119 Trochodendron aralioides HOM05D003923 ORTHO05D004553 7.7e-67 258.5 353 51.3
Nn5g29082 Nelumbo nucifera HOM05D003923 ORTHO05D004553 3.8e-66 256.1 357 46.5
Potri.005G166400 Populus trichocarpa HOM05D003923 ORTHO05D004553 8.5e-66 255.0 366 50.5
Sabra05G0125400 Salix brachista HOM05D003923 ORTHO05D004553 1.9e-65 253.8 369 50.4
PSO210G6507 Papaver somniferum HOM05D003923 ORTHO05D004553 3.2e-65 253.1 375 48.5
Psat5g138360 Pisum sativum HOM05D003923 ORTHO05D004553 4.2e-65 252.7 361 47.4
Cpa.g.sc36.119 Carica papaya HOM05D003923 ORTHO05D004553 2.1e-64 250.4 366 47.3
Duzib041G0577 Durio zibethinus HOM05D003923 ORTHO05D004553 4.7e-64 249.2 359 47.4
PSO447G0218 Papaver somniferum HOM05D003923 ORTHO05D004553 6.1e-64 248.8 374 47.6
Lj1g0006284 Lotus japonicus HOM05D003923 ORTHO05D004553 1.0e-63 248.1 373 42.6
EL10Ac1g01249 Beta vulgaris HOM05D003923 ORTHO05D004553 1.8e-63 247.3 367 44.7
Lalb_Chr11g0065491 Lupinus albus HOM05D003923 ORTHO05D004553 1.8e-63 247.3 364 48.4
MD15G1366500 Malus domestica HOM05D003923 ORTHO05D004553 1.8e-63 247.3 383 48.3
Prupe.1G514400 Prunus persica HOM05D003923 ORTHO05D004553 1.8e-63 247.3 377 47.7
Ciclev10001646m.g Citrus clementina HOM05D003923 ORTHO05D004553 3.0e-63 246.5 374 48.1
Aqoxy5G01999 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 1.2e-62 244.6 356 46.9
Gohir.D06G037500 Gossypium hirsutum HOM05D003923 ORTHO05D004553 2.6e-62 243.4 363 46.3
Phvul.009G029900 Phaseolus vulgaris HOM05D003923 ORTHO05D004553 7.5e-62 241.9 359 44.8
Gohir.A06G036700 Gossypium hirsutum HOM05D003923 ORTHO05D004553 1.3e-61 241.1 362 43.6
Gorai.010G042400 Gossypium raimondii HOM05D003923 ORTHO05D004553 1.3e-61 241.1 361 47.1
TPR.G35206 Trifolium pratense HOM05D003923 ORTHO05D004553 1.3e-61 241.1 360 45.0
COL.COLO4_16427 Corchorus olitorius HOM05D003923 ORTHO05D004553 2.2e-61 240.4 351 48.7
CANSAT25G0676 Cannabis sativa HOM05D003923 ORTHO05D004553 6.3e-61 238.8 380 45.5
MD08G1180900 Malus domestica HOM05D003923 ORTHO05D004553 4.1e-60 236.1 375 45.6
Duzib093G1759 Durio zibethinus HOM05D003923 ORTHO05D004553 7.0e-60 235.3 372 45.2
BcaC08g47387 Brassica carinata HOM05D003923 ORTHO05D004553 5.9e-59 232.3 371 42.0
C06p52080 Brassica napus HOM05D003923 ORTHO05D004553 5.9e-59 232.3 371 42.0
BolC6t40231H Brassica oleracea HOM05D003923 ORTHO05D004553 5.9e-59 232.3 371 42.0
MSTRG.24466 Avicennia marina HOM05D003923 ORTHO05D004553 2.3e-58 230.3 369 43.9
Nitab4.5_0000421g0080 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.5e-57 227.6 363 48.8
BcaB03g15981 Brassica carinata HOM05D003923 ORTHO05D004553 4.2e-57 226.1 354 45.5
Sc23g0000110 Simmondsia chinensis HOM05D003923 ORTHO05D004553 7.2e-57 225.3 361 43.2
Glyma.06G104700 Glycine max HOM05D003923 ORTHO05D004553 9.5e-57 224.9 361 47.4
PGR042G1650 Punica granatum HOM05D003923 ORTHO05D004553 1.0e-55 221.5 364 42.9
Duzib116G0286 Durio zibethinus HOM05D003923 ORTHO05D004553 6.8e-55 218.8 285 51.2
THA.LOC104809709 Tarenaya hassleriana HOM05D003923 ORTHO05D004553 1.5e-54 217.6 366 42.3
Eucgr.F02437 Eucalyptus grandis HOM05D003923 ORTHO05D004553 3.4e-54 216.5 345 41.4
Ca_15243_v3 Cicer arietinum L. HOM05D003923 ORTHO05D004553 2.2e-53 213.8 363 43.5
Nitab4.5_0002243g0010 Nicotiana tabacum HOM05D003923 ORTHO05D004553 2.2e-53 213.8 341 45.5
Actinidia30763 Actinidia chinensis HOM05D003923 ORTHO05D004553 3.7e-53 213.0 352 39.2
Solyc12g056990.1 Solanum lycopersicum HOM05D003923 ORTHO05D004553 3.7e-53 213.0 364 43.4
CAN.G1261.5 Capsicum annuum HOM05D003923 ORTHO05D004553 6.3e-53 212.2 360 41.9
PGSC0003DMG400008539 Solanum tuberosum HOM05D003923 ORTHO05D004553 6.3e-53 212.2 356 44.7
vmacro21241 Vaccinium macrocarpon HOM05D003923 ORTHO05D004553 1.1e-52 211.5 368 42.1
Peaxi162Scf00160g00147 Petunia axillaris HOM05D003923 ORTHO05D004553 1.8e-52 210.7 357 44.3
Eucgr.F00301 Eucalyptus grandis HOM05D003923 ORTHO05D004553 2.4e-52 210.3 277 48.4
MBI02_g08739_MAGBIO Magnolia biondii HOM05D003923 ORTHO05D004553 5.4e-52 209.1 360 42.2
Sabra02G0074700 Salix brachista HOM05D003923 ORTHO05D004553 7.0e-52 208.8 364 45.3
BcaB05g25102 Brassica carinata HOM05D003923 ORTHO05D004553 1.2e-51 208.0 367 41.4
Manes.02G153800 Manihot esculenta HOM05D003923 ORTHO05D004553 1.2e-51 208.0 363 42.7
AL2G38420 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 4.5e-51 206.1 352 46.0
Nitab4.5_0000675g0060 Nicotiana tabacum HOM05D003923 ORTHO05D004553 5.9e-51 205.7 358 44.1
ClCG11G015440 Citrullus lanatus HOM05D003923 ORTHO05D004553 5.0e-50 202.6 354 41.2
Carub.0002s2500 Capsella rubella HOM05D003923 ORTHO05D004553 8.6e-50 201.8 355 43.7
Sp5g33250 Schrenkiella parvula HOM05D003923 ORTHO05D004553 8.6e-50 201.8 351 43.0
Glyma.04G103500 Glycine max HOM05D003923 ORTHO05D004553 1.5e-49 201.1 355 39.7
CARHR071570 Cardamine hirsuta HOM05D003923 ORTHO05D004553 2.5e-49 200.3 359 44.8
Aa31LG4G8160 Aethionema arabicum HOM05D003923 ORTHO05D004553 7.3e-49 198.7 356 42.1
MELO3C010430.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.1e-48 197.2 354 39.5
HanXRQChr05g0162921 Helianthus annuus HOM05D003923 ORTHO05D004553 8.0e-48 195.3 371 41.5
Sp1g19740 Schrenkiella parvula HOM05D003923 ORTHO05D004553 1.8e-47 194.1 368 41.3
AL1G35680 Arabidopsis lyrata HOM05D003923 ORTHO05D004553 5.2e-47 192.6 357 44.3
A07p43360 Brassica napus HOM05D003923 ORTHO05D004553 5.2e-47 192.6 368 40.2
BcaB02g07147 Brassica carinata HOM05D003923 ORTHO05D004553 8.9e-47 191.8 349 40.4
BraA07t31856Z Brassica rapa HOM05D003923 ORTHO05D004553 8.9e-47 191.8 366 38.8
CsaV3_2G024220 Cucumis sativus L. HOM05D003923 ORTHO05D004553 1.2e-46 191.4 365 44.9
MELO3C011359.2 Cucumis melo HOM05D003923 ORTHO05D004553 2.0e-46 190.7 365 44.4
Carub.0001s2178 Capsella rubella HOM05D003923 ORTHO05D004553 2.6e-46 190.3 365 43.3
AT1G78110 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 3.4e-46 189.9 351 43.6
MSTRG.22149 Avicennia marina HOM05D003923 ORTHO05D004553 3.4e-46 189.9 361 43.8
BcaC03g15795 Brassica carinata HOM05D003923 ORTHO05D004553 4.4e-46 189.5 370 38.1
CsaV3_4G028650 Cucumis sativus L. HOM05D003923 ORTHO05D004553 5.8e-46 189.1 353 42.2
Sopen04g029130 Solanum pennellii HOM05D003923 ORTHO05D004553 5.8e-46 189.1 362 43.4
BolC2t09553H Brassica oleracea HOM05D003923 ORTHO05D004553 7.5e-46 188.7 370 37.8
C02p35410 Brassica napus HOM05D003923 ORTHO05D004553 9.8e-46 188.3 370 37.6
Sed0005628 Sechium edule HOM05D003923 ORTHO05D004553 9.8e-46 188.3 367 41.1
Thhalv10018798m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 1.3e-45 188.0 349 44.1
AT1G22230 Arabidopsis thaliana HOM05D003923 ORTHO05D004553 1.7e-45 187.6 354 42.4
BraA09t39730Z Brassica rapa HOM05D003923 ORTHO05D004553 1.7e-45 187.6 368 39.9
Lalb_Chr17g0344141 Lupinus albus HOM05D003923 ORTHO05D004553 1.7e-45 187.6 355 39.2
VMungo1309G2192 Vigna mungo HOM05D003923 ORTHO05D004553 2.2e-45 187.2 362 42.0
BraA02t07205Z Brassica rapa HOM05D003923 ORTHO05D004553 6.4e-45 185.7 367 38.7
A02p22020 Brassica napus HOM05D003923 ORTHO05D004553 8.3e-45 185.3 367 38.4
Lalb_Chr04g0253191 Lupinus albus HOM05D003923 ORTHO05D004553 1.1e-44 184.9 326 41.4
Nitab4.5_0001992g0040 Nicotiana tabacum HOM05D003923 ORTHO05D004553 1.1e-44 184.9 355 42.5
CARHR022580 Cardamine hirsuta HOM05D003923 ORTHO05D004553 1.4e-44 184.5 356 43.0
PGSC0003DMG400009479 Solanum tuberosum HOM05D003923 ORTHO05D004553 1.4e-44 184.5 359 41.8
A09p42540 Brassica napus HOM05D003923 ORTHO05D004553 1.9e-44 184.1 369 39.6
Ah.05g170190 Amaranthus hybridus HOM05D003923 ORTHO05D004553 4.1e-44 183.0 358 41.6
BraA07t30411Z Brassica rapa HOM05D003923 ORTHO05D004553 7.0e-44 182.2 373 42.1
Sopen00g003260 Solanum pennellii HOM05D003923 ORTHO05D004553 7.0e-44 182.2 337 41.2
A07p27700 Brassica napus HOM05D003923 ORTHO05D004553 1.6e-43 181.0 371 41.5
unitig_21.g20601 Utricularia gibba HOM05D003923 ORTHO05D004553 2.7e-43 180.3 367 36.8
Atru.chr13.1213 Acer truncatum HOM05D003923 ORTHO05D004553 6.6e-42 175.6 295 46.4
ClCG08G011040 Citrullus lanatus HOM05D003923 ORTHO05D004553 6.6e-42 175.6 366 43.4
BcaB07g32243 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-41 174.9 353 39.1
BcaC05g26150 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-41 174.9 353 39.1
C05p21350 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-41 174.9 353 39.1
BcaB07g32245 Brassica carinata HOM05D003923 ORTHO05D004553 1.9e-41 174.1 367 38.1
BolC5t30833H Brassica oleracea HOM05D003923 ORTHO05D004553 1.9e-41 174.1 353 40.5
ATR0564G364 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.5e-41 173.7 365 35.9
BcaC08g45438 Brassica carinata HOM05D003923 ORTHO05D004553 1.1e-39 168.3 369 40.7
C06p30680 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-39 168.3 369 40.7
BolC6t38232H Brassica oleracea HOM05D003923 ORTHO05D004553 1.1e-39 168.3 369 40.7
Migut.O00455 Erythranthe guttata HOM05D003923 ORTHO05D004553 8.9e-39 165.2 173 54.3
Migut.N02906 Erythranthe guttata HOM05D003923 ORTHO05D004553 1.5e-38 164.5 373 37.8
Sed0003612 Sechium edule HOM05D003923 ORTHO05D004553 2.0e-38 164.1 276 39.1
Thhalv10008264m.g Eutrema salsugineum HOM05D003923 ORTHO05D004553 7.5e-38 162.2 372 37.9
AUR62027732 Chenopodium quinoa HOM05D003923 ORTHO05D004553 1.7e-37 161.0 200 50.5
BraA07t29207Z Brassica rapa HOM05D003923 ORTHO05D004553 1.9e-36 157.5 351 37.6
Dinv13027 Davidia involucrata HOM05D003923 ORTHO05D004553 2.1e-35 154.1 257 42.0
A07p14630 Brassica napus HOM05D003923 ORTHO05D004553 6.0e-35 152.5 353 36.8
Aqoxy6G00599 Aquilegia oxysepala HOM05D003923 ORTHO05D004553 7.8e-35 152.1 366 34.4
Zm00001eb098670 Zea mays HOM05D003923 ORTHO05D004553 6.6e-34 149.1 392 34.2
Solyc04g072940.4 Solanum lycopersicum HOM05D003923 ORTHO05D004553 2.5e-33 147.1 336 39.6
unitig_744.g24093 Utricularia gibba HOM05D003923 ORTHO05D004553 8.1e-32 142.1 349 32.7
PSO781G0128 Papaver somniferum HOM05D003923 ORTHO05D004553 5.2e-31 139.4 415 33.7
Aa31LG7G6170 Aethionema arabicum HOM05D003923 ORTHO05D004553 6.8e-31 139.0 359 33.1
Zm00001eb311240 Zea mays HOM05D003923 ORTHO05D004553 6.8e-31 139.0 382 32.7
BcaC06g34942 Brassica carinata HOM05D003923 ORTHO05D004553 9.9e-30 135.2 351 34.5
SEGI_41423 Sequoiadendron giganteum HOM05D003923 ORTHO05D004553 1.3e-29 134.8 266 34.6
Sed0022190 Sechium edule HOM05D003923 ORTHO05D004553 4.9e-29 132.9 263 38.8
PSO541G2428 Papaver somniferum HOM05D003923 ORTHO05D004553 1.4e-28 131.3 425 31.3
Zm00001eb255200 Zea mays HOM05D003923 ORTHO05D004553 2.1e-27 127.5 366 32.0
ATR0122G028 Amborella trichopoda HOM05D003923 ORTHO05D004553 2.7e-27 127.1 348 31.9
SalBow7G0529 Salvia bowleyana HOM05D003923 ORTHO05D004553 6.0e-27 125.9 277 34.7
CDE12G0356 Ceratophyllum demersum HOM05D003923 ORTHO05D004553 2.3e-26 124.0 230 35.2
C07p21520 Brassica napus HOM05D003923 ORTHO05D004553 1.1e-25 121.7 351 31.9
Zm00001eb194180 Zea mays HOM05D003923 ORTHO05D004553 4.0e-23 113.2 367 31.9
BolC7t42678H Brassica oleracea HOM05D003923 ORTHO05D004553 1.4e-20 104.8 170 42.9
HPP92_002331 Vanilla planifolia HOM05D003923 ORTHO05D004553 1.1e-15 88.6 357 30.0
A07p43420 Brassica napus HOM05D003923 ORTHO05D004553 3.8e-13 80.1 104 47.1
ATR0153G027 Amborella trichopoda HOM05D003923 ORTHO05D004553 3.2e-12 77.0 182 32.4
Os02g0753400 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 3.5e-11 73.6 348 28.2
unitig_578.g16204 Utricularia gibba HOM05D003923 ORTHO05D004553 5.1e-10 69.7 226 32.3
GSVIVG01009013001 Vitis vinifera HOM05D003923 ORTHO05D004553 1.1e-09 68.6 217 29.0
Os09g0370000 Oryza sativa ssp. japonica HOM05D003923 ORTHO05D004553 1.5e-09 68.2 379 30.1
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 3.1e-07 60.5 294 25.5
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 3.4e-06 57.0 320 26.6
SEGI_08873 Sequoiadendron giganteum HOM05D004118 ORTHO05D004686 9.9e-06 55.5 217 28.6


User provided reference genes

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