Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 1.1e-77 293.1 140 100.0
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 3.9e-62 241.5 136 83.1
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 2.5e-61 238.8 138 84.8
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 1.1e-56 223.4 137 78.1
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.5e-47 191.8 141 68.1
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 3.5e-47 191.8 141 68.1
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 6.0e-47 191.0 136 68.4
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 1.7e-46 189.5 136 70.6
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 8.6e-46 187.2 140 66.4
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.1e-45 186.8 140 65.7
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 1.5e-45 186.4 134 67.2
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 2.5e-45 185.7 136 69.1
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.5e-45 185.7 133 66.2
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 3.3e-45 185.3 138 65.9
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 3.3e-45 185.3 137 65.7
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 7.3e-45 184.1 133 65.4
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 7.3e-45 184.1 134 67.2
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 9.6e-45 183.7 137 67.2
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 1.2e-44 183.3 136 65.4
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 1.6e-44 183.0 133 64.7
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 1.6e-44 183.0 138 65.9
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 2.1e-44 182.6 137 67.2
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 6.2e-44 181.0 136 69.9
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 8.1e-44 180.6 136 64.0
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.1e-43 180.3 136 67.6
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 1.4e-43 179.9 131 65.6
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 1.4e-43 179.9 133 63.9
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.8e-43 179.5 136 66.9
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 2.4e-43 179.1 137 65.0
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 3.1e-43 178.7 138 64.5
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 4.0e-43 178.3 138 65.2
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 5.2e-43 177.9 138 61.6
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 5.2e-43 177.9 145 61.4
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 5.2e-43 177.9 145 61.4
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 6.9e-43 177.6 136 65.4
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 8.9e-43 177.2 136 64.0
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 1.2e-42 176.8 145 60.7
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 1.2e-42 176.8 136 66.2
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 1.5e-42 176.4 137 65.7
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 1.5e-42 176.4 134 62.7
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 2.0e-42 176.0 145 60.7
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 2.0e-42 176.0 145 60.7
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 2.0e-42 176.0 136 62.5
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 2.6e-42 175.6 140 64.3
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 4.4e-42 174.9 149 58.4
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 4.4e-42 174.9 144 61.1
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 4.4e-42 174.9 144 61.1
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 4.4e-42 174.9 144 61.1
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 4.4e-42 174.9 137 65.0
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 4.4e-42 174.9 149 59.1
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 7.6e-42 174.1 136 66.2
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 9.9e-42 173.7 144 61.1
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 9.9e-42 173.7 144 61.1
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 1.3e-41 173.3 136 66.9
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 1.3e-41 173.3 138 62.3
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 1.3e-41 173.3 131 62.6
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 1.7e-41 172.9 147 61.9
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 2.9e-41 172.2 137 62.8
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 8.4e-41 170.6 134 62.7
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 8.4e-41 170.6 138 62.3
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 1.1e-40 170.2 137 62.8
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 1.1e-40 170.2 137 62.0
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 1.4e-40 169.9 142 60.6
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 2.4e-40 169.1 147 59.2
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 3.2e-40 168.7 138 61.6
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 5.4e-40 167.9 107 69.2
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 9.3e-40 167.2 146 58.9
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 1.2e-39 166.8 146 57.5
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 1.2e-39 166.8 139 61.9
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.6e-39 166.4 102 75.5
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 1.6e-39 166.4 137 62.0
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 2.1e-39 166.0 150 58.0
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 2.1e-39 166.0 148 57.4
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 3.5e-39 165.2 141 60.3
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 4.6e-39 164.9 145 56.6
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 4.6e-39 164.9 140 60.7
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 4.6e-39 164.9 102 74.5
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 6.0e-39 164.5 115 68.7
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 7.8e-39 164.1 139 61.2
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 1.3e-38 163.3 140 60.0
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 6.6e-38 161.0 137 62.8
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 1.1e-37 160.2 139 61.2
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.5e-37 159.8 140 58.6
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 7.3e-37 157.5 133 58.6
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 7.3e-37 157.5 133 58.6
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 7.3e-37 157.5 134 59.7
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 9.6e-37 157.1 137 60.6
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.3e-36 156.8 152 53.9
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.6e-36 156.4 135 60.0
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 1.6e-36 156.4 121 64.5
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 2.1e-36 156.0 135 57.8
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.1e-36 156.0 134 59.0
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 3.6e-36 155.2 100 70.0
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 6.2e-36 154.5 123 62.6
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 8.1e-36 154.1 133 57.1
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 8.1e-36 154.1 133 57.1
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.4e-35 153.3 138 56.5
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 1.8e-35 152.9 111 65.8
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 5.3e-35 151.4 136 55.9
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 6.9e-35 151.0 136 56.6
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 2.0e-34 149.4 103 63.1
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 4.5e-34 148.3 102 68.6
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 9.9e-34 147.1 99 68.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 6.4e-33 144.4 132 56.8
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 6.4e-33 144.4 132 56.8
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 3.2e-32 142.1 125 54.4
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 9.3e-32 140.6 125 54.4
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 5.1e-30 134.8 130 52.3
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 8.7e-30 134.0 131 50.4
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 7.4e-29 131.0 102 64.7
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 8.1e-28 127.5 140 47.9
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 4.0e-27 125.2 103 59.2
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 9.0e-27 124.0 138 46.4
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 6.4e-25 117.9 77 71.4
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 1.1e-24 117.1 115 47.0
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 3.2e-24 115.5 131 43.5
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 1.8e-22 109.8 103 53.4
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 6.7e-22 107.8 80 65.0
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 8.7e-22 107.5 103 51.5
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 2.0e-18 96.3 54 72.2
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.3e-17 93.6 105 45.7
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 2.2e-17 92.8 73 50.7
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.6e-15 85.1 72 58.3
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.8e-14 83.2 61 67.2
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 5.1e-14 81.6 73 58.9
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 7.6e-10 67.8 54 53.7
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 7.2e-08 61.2 61 45.9


User provided reference genes

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