Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.4e-107 392.9 193 100.0
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 2.2e-76 289.3 202 73.8
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 1.6e-74 283.1 186 75.3
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 1.5e-69 266.5 181 71.3
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 5.0e-68 261.5 193 68.4
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 9.4e-67 257.3 193 69.9
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 3.6e-66 255.4 185 69.2
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 1.0e-65 253.8 193 68.9
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 6.7e-65 251.1 192 67.2
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 8.8e-65 250.8 160 75.0
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 8.8e-65 250.8 189 64.0
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 8.8e-65 250.8 161 73.9
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.5e-64 250.0 182 67.0
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 2.6e-64 249.2 188 67.6
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.4e-64 248.4 192 65.6
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 7.4e-64 247.7 160 74.4
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 7.4e-64 247.7 189 65.6
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 9.7e-64 247.3 186 66.1
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.3e-63 246.9 161 72.7
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 1.7e-63 246.5 186 62.9
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.7e-63 246.5 161 71.4
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 2.8e-63 245.7 189 65.1
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 2.8e-63 245.7 185 63.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 4.8e-63 245.0 189 64.6
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 6.3e-63 244.6 184 65.2
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 8.2e-63 244.2 190 62.1
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 1.1e-62 243.8 186 62.4
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.1e-62 243.8 193 66.3
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.4e-62 243.4 160 70.0
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.8e-62 243.0 193 66.3
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 2.4e-62 242.7 189 63.0
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 2.4e-62 242.7 190 60.5
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 3.1e-62 242.3 181 66.9
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 4.1e-62 241.9 160 73.1
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 5.3e-62 241.5 187 62.6
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 7.0e-62 241.1 156 72.4
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.2e-61 240.4 195 59.0
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 1.2e-61 240.4 181 66.3
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.0e-61 239.6 166 69.3
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.0e-61 239.6 190 64.2
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 2.0e-61 239.6 181 64.1
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.5e-61 238.8 183 64.5
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 4.5e-61 238.4 181 66.3
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 5.9e-61 238.0 162 66.7
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 7.7e-61 237.7 181 63.5
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 7.7e-61 237.7 158 71.5
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 1.0e-60 237.3 181 65.7
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.0e-60 237.3 190 64.7
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.7e-60 236.5 187 63.1
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.2e-60 236.1 181 63.5
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 2.2e-60 236.1 196 62.8
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 2.9e-60 235.7 190 62.6
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 2.9e-60 235.7 181 63.0
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 5.0e-60 235.0 188 58.5
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 5.0e-60 235.0 182 63.7
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 6.5e-60 234.6 181 63.5
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 6.5e-60 234.6 160 67.5
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 8.5e-60 234.2 192 63.5
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 8.5e-60 234.2 166 68.7
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 1.5e-59 233.4 184 62.0
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 2.5e-59 232.6 167 66.5
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.2e-59 232.3 167 65.9
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 4.2e-59 231.9 168 68.5
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 7.2e-59 231.1 161 69.6
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 9.4e-59 230.7 167 67.7
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.2e-58 230.3 161 68.9
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 1.2e-58 230.3 180 63.9
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 1.2e-58 230.3 157 68.8
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.6e-58 229.9 167 65.3
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.7e-58 229.2 153 69.9
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 3.6e-58 228.8 188 58.0
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 6.1e-58 228.0 181 60.8
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 6.1e-58 228.0 167 61.1
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 8.0e-58 227.6 181 60.8
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.4e-57 226.9 181 60.8
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.4e-57 226.9 181 60.8
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 1.8e-57 226.5 181 61.9
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 2.3e-57 226.1 181 61.9
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 3.0e-57 225.7 181 60.2
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 3.0e-57 225.7 181 61.3
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 3.9e-57 225.3 168 63.7
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 5.2e-57 224.9 188 58.0
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 5.2e-57 224.9 194 61.9
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 6.7e-57 224.6 181 61.3
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 8.8e-57 224.2 181 59.7
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 8.8e-57 224.2 181 59.7
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.5e-56 223.4 181 61.3
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.5e-56 223.4 168 66.1
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 2.6e-56 222.6 148 69.6
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 2.6e-56 222.6 183 60.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 3.3e-56 222.2 181 59.7
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 7.4e-56 221.1 181 60.2
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 9.7e-56 220.7 181 59.1
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 9.7e-56 220.7 182 63.7
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 9.7e-56 220.7 190 57.9
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.7e-55 219.9 155 66.5
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.2e-55 219.5 155 65.8
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 2.8e-55 219.2 160 66.2
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 3.7e-55 218.8 181 60.2
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 3.7e-55 218.8 155 65.2
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 6.3e-55 218.0 167 64.7
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 3.1e-54 215.7 157 65.0
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 7.0e-54 214.5 204 55.9
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 2.7e-50 202.6 180 56.1
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 5.7e-48 194.9 149 61.7
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 2.2e-47 193.0 127 77.2
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 9.1e-46 187.6 171 53.2
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.7e-44 183.3 155 55.5
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 3.6e-42 175.6 168 51.8
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 3.6e-42 175.6 185 47.6
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 8.0e-42 174.5 181 53.6
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 1.0e-41 174.1 171 49.7
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.5e-37 159.1 151 53.0
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.5e-37 159.1 151 53.0
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 7.7e-37 157.9 123 65.9
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 6.6e-36 154.8 120 65.0
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.1e-34 149.8 98 70.4
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.1e-34 149.8 143 51.7
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.4e-33 147.1 119 61.3
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.8e-33 146.7 127 59.8
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 8.9e-33 144.4 112 59.8
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.1e-27 127.5 101 59.4
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.2e-24 117.5 154 40.3
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 2.4e-22 109.8 75 72.0
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.2e-21 107.5 70 75.7
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 2.0e-21 106.7 70 74.3
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.0e-20 104.4 70 75.7
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 3.0e-20 102.8 84 53.6
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 9.5e-19 97.8 69 66.7
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 2.6e-16 89.7 90 48.9
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 3.7e-15 85.9 151 34.4
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 5.6e-11 72.0 73 47.9
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 7.3e-11 71.6 46 71.7
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 1.6e-10 70.5 38 76.3


User provided reference genes

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