Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2537 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.3e-291 1005.7 548 100.0
HanXRQChr11g0323951 Helianthus annuus HOM05D003653 ORTHO05D004249 2.8e-180 636.0 523 68.5
ECA247G3145 Erigeron canadensis HOM05D003653 ORTHO05D004249 1.8e-179 633.3 516 70.0
GSVIVG01015003001 Vitis vinifera HOM05D003653 ORTHO05D004249 2.8e-164 582.8 519 62.6
Lj6C86G4 Lonicera japonica HOM05D003653 ORTHO05D004249 6.2e-164 581.6 478 66.5
MSTRG.26501 Avicennia marina HOM05D003653 ORTHO05D004249 1.3e-161 573.9 519 61.7
Atru.chr7.1784 Acer truncatum HOM05D003653 ORTHO05D004249 4.9e-161 572.0 517 61.7
Ciclev10007512m.g Citrus clementina HOM05D003653 ORTHO05D004249 6.4e-161 571.6 519 62.0
Thecc.09G069200 Theobroma cacao HOM05D003653 ORTHO05D004249 8.3e-161 571.2 519 60.5
DCAR_028533 Daucus carota HOM05D003653 ORTHO05D004249 1.1e-160 570.9 519 62.0
Sabra10G0107200 Salix brachista HOM05D003653 ORTHO05D004249 1.1e-160 570.9 501 62.5
Lj4C921G8 Lonicera japonica HOM05D003653 ORTHO05D004249 2.4e-160 569.7 499 63.3
Potri.010G138900 Populus trichocarpa HOM05D003653 ORTHO05D004249 7.1e-160 568.2 530 60.0
TAR626G0857 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.2e-159 567.4 508 62.4
Dinv11396 Davidia involucrata HOM05D003653 ORTHO05D004249 2.1e-159 566.6 519 61.5
Prupe.7G190900 Prunus persica HOM05D003653 ORTHO05D004249 2.7e-159 566.2 519 61.7
QL02p096254 Quercus lobata HOM05D003653 ORTHO05D004249 3.5e-159 565.8 519 60.9
Gorai.010G095200 Gossypium raimondii HOM05D003653 ORTHO05D004249 4.6e-159 565.5 519 59.9
COL.COLO4_21195 Corchorus olitorius HOM05D003653 ORTHO05D004249 6.0e-159 565.1 519 60.1
Hma1.2p1_0179F.1_g079140 Hydrangea macrophylla HOM05D003653 ORTHO05D004249 1.0e-158 564.3 519 61.3
Gohir.D06G081700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.3e-158 563.9 519 59.7
Cfa000655 Carpinus fangiana HOM05D003653 ORTHO05D004249 3.9e-158 562.4 529 60.1
SalBow5G5324 Salvia bowleyana HOM05D003653 ORTHO05D004249 8.6e-158 561.2 519 61.1
MBI13_g01694_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 1.5e-157 560.5 518 60.6
Manes.16G089600 Manihot esculenta HOM05D003653 ORTHO05D004249 1.5e-157 560.5 519 60.1
CiPaw.07G188300 Carya illinoinensis HOM05D003653 ORTHO05D004249 1.9e-157 560.1 519 60.3
Cc06_g12780 Coffea canephora HOM05D003653 ORTHO05D004249 1.9e-157 560.1 519 59.9
SGA_v2.0_scaffold55G19872 Striga asiatica HOM05D003653 ORTHO05D004249 1.9e-157 560.1 516 61.4
CANSAT56G3945 Cannabis sativa HOM05D003653 ORTHO05D004249 3.3e-157 559.3 519 59.9
QL02p096361 Quercus lobata HOM05D003653 ORTHO05D004249 3.3e-157 559.3 519 60.5
TWI32G0371 Tripterygium wilfordii HOM05D003653 ORTHO05D004249 3.3e-157 559.3 519 60.3
FvH4_1g09540 Fragaria vesca HOM05D003653 ORTHO05D004249 5.6e-157 558.5 518 61.2
FAN19G0402 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.6e-157 558.5 518 61.2
FAN23G3130 Fragaria x ananassa HOM05D003653 ORTHO05D004249 5.6e-157 558.5 518 61.2
RcHm_v2.0_Chr2g0096121 Rosa chinensis HOM05D003653 ORTHO05D004249 5.6e-157 558.5 518 61.4
FAN28G1145 Fragaria x ananassa HOM05D003653 ORTHO05D004249 1.2e-156 557.4 518 61.0
Gohir.A06G084400 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.1e-156 556.6 519 59.2
FAN26G2747 Fragaria x ananassa HOM05D003653 ORTHO05D004249 2.8e-156 556.2 518 61.0
Sopen04g003800 Solanum pennellii HOM05D003653 ORTHO05D004249 1.8e-155 553.5 519 59.7
Glyma.13G114900 Glycine max HOM05D003653 ORTHO05D004249 4.0e-155 552.4 519 58.6
Glyma.17G045100 Glycine max HOM05D003653 ORTHO05D004249 5.2e-155 552.0 519 58.6
Aa31LG4G3690 Aethionema arabicum HOM05D003653 ORTHO05D004249 1.5e-154 550.4 512 59.0
arahy.Tifrunner.gnm1.ann1.LZJ3ZW Arachis hypogaea HOM05D003653 ORTHO05D004249 2.6e-154 549.7 490 60.8
Solyc04g008640.3 Solanum lycopersicum HOM05D003653 ORTHO05D004249 4.4e-154 548.9 519 59.2
Duzib187G0285 Durio zibethinus HOM05D003653 ORTHO05D004249 5.8e-154 548.5 519 58.8
CAN.G2030.2 Capsicum annuum HOM05D003653 ORTHO05D004249 7.6e-154 548.1 524 59.2
RcHm_v2.0_Chr2g0096281 Rosa chinensis HOM05D003653 ORTHO05D004249 7.6e-154 548.1 518 60.2
Lj4g0027638 Lotus japonicus HOM05D003653 ORTHO05D004249 9.9e-154 547.7 519 57.8
Migut.L01598 Erythranthe guttata HOM05D003653 ORTHO05D004249 1.7e-153 547.0 519 59.9
Manes.03G045400 Manihot esculenta HOM05D003653 ORTHO05D004249 2.2e-153 546.6 530 59.1
Nitab4.5_0001114g0100 Nicotiana tabacum HOM05D003653 ORTHO05D004249 2.9e-153 546.2 519 59.3
PGSC0003DMG400026759 Solanum tuberosum HOM05D003653 ORTHO05D004249 2.9e-153 546.2 522 58.8
MD15G1224400 Malus domestica HOM05D003653 ORTHO05D004249 3.7e-153 545.8 518 59.8
Phvul.003G126900 Phaseolus vulgaris HOM05D003653 ORTHO05D004249 3.7e-153 545.8 519 58.2
Lsat_1_v5_gn_9_48260 Lactuca sativa HOM05D003653 ORTHO05D004249 4.9e-153 545.4 581 57.7
Sc18g0002910 Simmondsia chinensis HOM05D003653 ORTHO05D004249 4.9e-153 545.4 519 58.2
Aqoxy7G04180 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 6.4e-153 545.0 518 59.8
CARHR066480 Cardamine hirsuta HOM05D003653 ORTHO05D004249 6.4e-153 545.0 520 57.7
Aqoxy4G00013 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 8.4e-153 544.7 518 59.8
TPR.G12688 Trifolium pratense HOM05D003653 ORTHO05D004249 8.4e-153 544.7 519 57.8
MD02G1104000 Malus domestica HOM05D003653 ORTHO05D004249 1.1e-152 544.3 518 59.3
Medtr4g124570 Medicago truncatula HOM05D003653 ORTHO05D004249 2.4e-152 543.1 519 57.6
VMungo1215G1873 Vigna mungo HOM05D003653 ORTHO05D004249 3.2e-152 542.7 519 57.8
Gorai.013G221900 Gossypium raimondii HOM05D003653 ORTHO05D004249 5.4e-152 542.0 518 58.1
ATR0099G047 Amborella trichopoda HOM05D003653 ORTHO05D004249 9.2e-152 541.2 518 58.1
Psat4g019560 Pisum sativum HOM05D003653 ORTHO05D004249 1.2e-151 540.8 519 57.6
Hund08907 Selenicereus undatus HOM05D003653 ORTHO05D004249 2.1e-151 540.0 492 60.0
Gohir.D13G195800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 3.5e-151 539.3 518 58.1
Peaxi162Scf00320g00019 Petunia axillaris HOM05D003653 ORTHO05D004249 6.0e-151 538.5 519 59.0
AL2G33210 Arabidopsis lyrata HOM05D003653 ORTHO05D004249 1.0e-150 537.7 520 57.5
AUR62028329 Chenopodium quinoa HOM05D003653 ORTHO05D004249 1.0e-150 537.7 490 59.8
arahy.Tifrunner.gnm1.ann1.H5KB4L Arachis hypogaea HOM05D003653 ORTHO05D004249 1.3e-150 537.3 519 57.4
AT1G73430 Arabidopsis thaliana HOM05D003653 ORTHO05D004249 1.7e-150 537.0 520 57.5
CAN.G137.40 Capsicum annuum HOM05D003653 ORTHO05D004249 2.3e-150 536.6 519 58.4
Lalb_Chr13g0299181 Lupinus albus HOM05D003653 ORTHO05D004249 2.3e-150 536.6 519 58.4
Thhalv10018146m.g Eutrema salsugineum HOM05D003653 ORTHO05D004249 5.1e-150 535.4 520 57.3
A07p39380 Brassica napus HOM05D003653 ORTHO05D004249 6.6e-150 535.0 520 57.5
C06p47610 Brassica napus HOM05D003653 ORTHO05D004249 6.6e-150 535.0 520 57.5
Carub.0001s3831 Capsella rubella HOM05D003653 ORTHO05D004249 6.6e-150 535.0 521 57.6
CiPaw.08G039100 Carya illinoinensis HOM05D003653 ORTHO05D004249 6.6e-150 535.0 519 58.4
THA.LOC104812181 Tarenaya hassleriana HOM05D003653 ORTHO05D004249 6.6e-150 535.0 522 57.1
EL10Ac8g18959 Beta vulgaris HOM05D003653 ORTHO05D004249 1.1e-149 534.3 516 57.8
Rhsim06G0154000 Rhododendron simsii HOM05D003653 ORTHO05D004249 1.1e-149 534.3 576 55.4
Gohir.A13G188800 Gossypium hirsutum HOM05D003653 ORTHO05D004249 1.5e-149 533.9 518 57.9
CsaV3_5G037140 Cucumis sativus L. HOM05D003653 ORTHO05D004249 3.3e-149 532.7 519 58.4
Eucgr.C00763 Eucalyptus grandis HOM05D003653 ORTHO05D004249 3.3e-149 532.7 519 57.6
Sp5g28630 Schrenkiella parvula HOM05D003653 ORTHO05D004249 5.6e-149 531.9 520 56.9
Sed0017256 Sechium edule HOM05D003653 ORTHO05D004249 2.8e-148 529.6 519 57.4
Aqoxy1G02116 Aquilegia oxysepala HOM05D003653 ORTHO05D004249 6.2e-148 528.5 518 58.7
BolC6t39799H Brassica oleracea HOM05D003653 ORTHO05D004249 3.1e-147 526.2 523 56.6
BraA07t31487Z Brassica rapa HOM05D003653 ORTHO05D004249 3.1e-147 526.2 523 56.6
vmacro03339 Vaccinium macrocarpon HOM05D003653 ORTHO05D004249 3.1e-147 526.2 591 53.5
MELO3C022888.2 Cucumis melo HOM05D003653 ORTHO05D004249 4.0e-147 525.8 519 58.0
Ah.09g228870 Amaranthus hybridus HOM05D003653 ORTHO05D004249 3.4e-146 522.7 519 55.9
CDE08G1372 Ceratophyllum demersum HOM05D003653 ORTHO05D004249 1.3e-145 520.8 518 56.8
PSO541G4412 Papaver somniferum HOM05D003653 ORTHO05D004249 1.7e-145 520.4 519 55.9
Os08g0451000 Oryza sativa ssp. japonica HOM05D003653 ORTHO05D004249 3.8e-145 519.2 518 55.6
PSO724G1082 Papaver somniferum HOM05D003653 ORTHO05D004249 1.2e-143 514.2 519 55.3
BcaC08g46765 Brassica carinata HOM05D003653 ORTHO05D004249 3.9e-142 509.2 504 57.1
PSO135G0095 Papaver somniferum HOM05D003653 ORTHO05D004249 3.9e-142 509.2 519 55.5
unitig_8.g3535 Utricularia gibba HOM05D003653 ORTHO05D004249 1.8e-139 500.4 524 54.6
Carub.0002s2017 Capsella rubella HOM05D003653 ORTHO05D004249 1.6e-135 487.3 583 50.4
Haze_18437 Corylus avellana HOM05D003653 ORTHO05D004249 2.7e-135 486.5 529 55.0
Duzib150G1359 Durio zibethinus HOM05D003653 ORTHO05D004249 2.5e-133 479.9 519 54.1
Mapoly0109s0022 Marchantia polymorpha HOM05D003653 ORTHO05D004249 3.6e-132 476.1 519 50.9
Nn8g38522 Nelumbo nucifera HOM05D003653 ORTHO05D004249 1.2e-130 471.1 519 54.1
C02p31060 Brassica napus HOM05D003653 ORTHO05D004249 3.8e-129 466.1 517 53.6
BcaNung06460 Brassica carinata HOM05D003653 ORTHO05D004249 2.1e-127 460.3 304 74.7
AUR62025332 Chenopodium quinoa HOM05D003653 ORTHO05D004249 1.8e-126 457.2 490 53.5
Zm00001eb040740 Zea mays HOM05D003653 ORTHO05D004249 5.6e-125 452.2 477 53.5
Oeu028863.2 Olea europaea HOM05D003653 ORTHO05D004249 1.3e-124 451.1 633 46.3
BolC2t09153H Brassica oleracea HOM05D003653 ORTHO05D004249 2.8e-124 449.9 496 53.4
Pp3c10_7010 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.4e-123 447.6 516 49.2
Actinidia05573 Actinidia chinensis HOM05D003653 ORTHO05D004249 8.4e-121 438.3 531 51.6
SMO196G0011 Selaginella moellendorffii HOM05D003653 ORTHO05D004249 2.3e-118 430.3 518 47.9
FAN26G0928 Fragaria x ananassa HOM05D003653 ORTHO05D004249 4.3e-117 426.0 458 56.6
Sopen07g006320 Solanum pennellii HOM05D003653 ORTHO05D004249 3.2e-112 409.8 486 50.8
HPP92_012790 Vanilla planifolia HOM05D003653 ORTHO05D004249 2.8e-108 396.7 518 46.3
Haze_06172 Corylus avellana HOM05D003653 ORTHO05D004249 1.7e-105 387.5 371 58.5
ClCG08G005060 Citrullus lanatus HOM05D003653 ORTHO05D004249 2.3e-102 377.1 623 42.7
Cpa.g.sc82.47 Carica papaya HOM05D003653 ORTHO05D004249 1.1e-96 358.2 375 55.7
Solyc07g017520.4 Solanum lycopersicum HOM05D003653 ORTHO05D004249 1.9e-96 357.5 253 71.1
CBR_g20391 Chara braunii HOM05D003653 ORTHO05D004249 9.4e-96 355.1 593 39.0
Pp3c14_9870 Physcomitrium patens HOM05D003653 ORTHO05D004249 1.0e-94 351.7 481 42.2
PSO675G3146 Papaver somniferum HOM05D003653 ORTHO05D004249 3.7e-92 343.2 439 48.3
CSS0022852 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 8.0e-71 272.3 176 80.1
Haze_16164 Corylus avellana HOM05D003653 ORTHO05D004249 1.8e-67 261.2 242 59.9
Lj6A103G48 Lonicera japonica HOM05D003653 ORTHO05D004249 3.1e-67 260.4 238 60.9
Cre03.g203750 Chlamydomonas reinhardtii HOM05D003653 ORTHO05D004249 1.1e-59 235.3 347 39.5
RcHm_v2.0_Chr2g0096141 Rosa chinensis HOM05D003653 ORTHO05D004249 1.4e-59 235.0 149 77.9
SEGI_38760 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 6.2e-55 219.5 302 46.0
CAN.G1364.1 Capsicum annuum HOM05D003653 ORTHO05D004249 3.2e-51 207.2 394 39.1
PRCOL_00003556 Prasinoderma coloniale HOM05D003653 ORTHO05D004249 9.5e-48 195.7 630 28.1
Nitab4.5_0022446g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 1.4e-38 165.2 98 81.6
Lj6C103G5 Lonicera japonica HOM05D003653 ORTHO05D004249 3.1e-38 164.1 365 35.3
SEGI_20750 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.7e-34 151.0 113 66.4
CSS0010075 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 4.4e-29 133.7 84 85.7
TAR383G0271 Trochodendron aralioides HOM05D003653 ORTHO05D004249 4.2e-27 127.1 86 77.9
Gohir.D08G133700 Gossypium hirsutum HOM05D003653 ORTHO05D004249 2.3e-25 121.3 79 72.2
Gorai.004G136800 Gossypium raimondii HOM05D003653 ORTHO05D004249 4.3e-24 117.1 128 52.3
Haze_06171 Corylus avellana HOM05D003653 ORTHO05D004249 1.6e-23 115.2 74 82.4
Nitab4.5_0000055g0010 Nicotiana tabacum HOM05D003653 ORTHO05D004249 1.1e-22 112.5 82 73.2
Cfa023740 Carpinus fangiana HOM05D003653 ORTHO05D004249 2.4e-22 111.3 297 26.3
Haze_16166 Corylus avellana HOM05D003653 ORTHO05D004249 2.9e-20 104.4 81 72.8
Gorai.013G153500 Gossypium raimondii HOM05D003653 ORTHO05D004249 1.6e-18 98.6 74 66.2
SEGI_27322 Sequoiadendron giganteum HOM05D003653 ORTHO05D004249 2.5e-16 91.3 62 72.6
Actinidia26999 Actinidia chinensis HOM05D003653 ORTHO05D004249 2.1e-15 88.2 59 81.4
Oeu030621.1 Olea europaea HOM05D003653 ORTHO05D004249 3.6e-15 87.4 94 55.3
Haze_19192 Corylus avellana HOM05D003653 ORTHO05D004249 3.1e-14 84.3 92 56.5
Lsat_1_v5_gn_7_58641 Lactuca sativa HOM05D003653 ORTHO05D004249 9.0e-14 82.8 107 57.0
Lsat_1_v5_gn_2_26321 Lactuca sativa HOM05D003653 ORTHO05D004249 5.8e-13 80.1 107 56.1
Lsat_1_v5_gn_2_82101 Lactuca sativa HOM05D003653 ORTHO05D004249 7.6e-13 79.7 120 52.5
Lsat_1_v5_gn_5_93841 Lactuca sativa HOM05D003653 ORTHO05D004249 2.9e-12 77.8 107 55.1
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 1.9e-11 75.1 68 57.4
Lsat_1_v5_gn_4_28660 Lactuca sativa HOM05D003653 ORTHO05D004249 2.4e-11 74.7 107 55.1
Medtr8g018610 Medicago truncatula HOM05D003653 ORTHO05D004249 2.4e-11 74.7 52 69.2
MBI08_g05369_MAGBIO Magnolia biondii HOM05D003653 ORTHO05D004249 5.5e-11 73.6 55 70.9
Gohir.D13G136950 Gossypium hirsutum HOM05D003653 ORTHO05D004249 9.3e-11 72.8 59 62.7
ECA236G3899 Erigeron canadensis HOM05D003566 ORTHO05D035101 7.9e-10 69.7 74 55.4
TAR383G1054 Trochodendron aralioides HOM05D003653 ORTHO05D004249 5.1e-09 67.0 192 39.1
CSS0016412 Camellia sinensis var. sinensis HOM05D003653 ORTHO05D004249 8.7e-09 66.2 34 82.4
QL02p096270 Quercus lobata HOM05D003653 ORTHO05D004249 1.9e-08 65.1 63 55.6
MCO01G230 Micromonas commoda HOM05D003653 ORTHO05D004249 9.6e-08 62.8 158 28.5


User provided reference genes

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