Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 5.5e-239 830.9 521 100.0
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 2.5e-21 107.8 212 37.3
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 2.1e-20 104.8 172 37.2
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 5.2e-19 100.1 177 36.7
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 1.2e-18 99.0 229 35.4
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 1.5e-18 98.6 180 37.8
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 2.0e-18 98.2 214 35.0
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 2.6e-18 97.8 376 29.3
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 2.6e-18 97.8 172 37.8
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 7.5e-18 96.3 180 35.0
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 2.8e-17 94.4 235 31.1
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 8.3e-17 92.8 210 33.8
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.4e-16 92.0 229 34.9
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 2.4e-16 91.3 210 33.8
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 3.1e-16 90.9 238 29.4
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 9.1e-16 89.4 212 34.0
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 9.1e-16 89.4 202 30.2
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 4.5e-15 87.0 160 36.2
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 4.5e-15 87.0 175 35.4
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.3e-14 85.5 204 33.3
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.7e-14 85.1 238 27.3
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 3.8e-14 84.0 387 28.7
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 8.5e-14 82.8 258 34.1
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 1.1e-13 82.4 167 34.1
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 1.1e-13 82.4 285 30.2
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 1.9e-13 81.6 128 37.5
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 7.2e-13 79.7 156 35.9
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 9.4e-13 79.3 182 29.7
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 9.4e-13 79.3 419 27.9
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 2.7e-12 77.8 169 31.4
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 4.7e-12 77.0 151 37.1
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.0e-11 75.9 364 28.8
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 4.0e-11 73.9 316 29.1
ATR0579G028 Amborella trichopoda HOM05D005336 ORTHO05D006511 8.8e-11 72.8 145 36.6
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 8.8e-11 72.8 315 27.6
Glyma.04G031100 Glycine max HOM05D006278 ORTHO05D007526 1.2e-10 72.4 312 29.8
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 2.6e-10 71.2 139 38.1
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 1.3e-09 68.9 186 31.2
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 1.7e-09 68.6 252 32.1
Glyma.06G031201 Glycine max HOM05D006278 ORTHO05D007526 1.7e-09 68.6 271 26.6
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 2.8e-09 67.8 116 39.7
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 2.8e-09 67.8 150 35.3
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 4.9e-09 67.0 299 28.8
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 1.1e-08 65.9 170 32.9
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.1e-08 65.9 368 29.1
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 1.1e-08 65.9 375 24.8
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 1.4e-08 65.5 330 29.4
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.4e-08 65.5 333 30.9
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 2.4e-08 64.7 375 28.0
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 4.1e-08 63.9 176 27.3
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 4.1e-08 63.9 176 28.4
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 4.1e-08 63.9 372 23.9
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 5.4e-08 63.5 401 28.2
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 5.4e-08 63.5 341 26.7
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 5.4e-08 63.5 215 27.4
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 7.0e-08 63.2 184 27.2
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 7.0e-08 63.2 305 28.9
Phvul.009G058700 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 7.0e-08 63.2 346 27.2
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 7.0e-08 63.2 161 32.9
Gohir.A02G094800 Gossypium hirsutum HOM05D005336 ORTHO05D006511 9.2e-08 62.8 108 37.0
Thecc.03G215000 Theobroma cacao HOM05D005336 ORTHO05D006511 9.2e-08 62.8 106 39.6
VMungo0720G3070 Vigna mungo HOM05D005336 ORTHO05D006511 9.2e-08 62.8 111 39.6
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 1.2e-07 62.4 105 40.0
SEGI_39402 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 1.2e-07 62.4 106 35.8
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 2.7e-07 61.2 380 25.8
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 2.7e-07 61.2 311 26.0
COL.COLO4_10851 Corchorus olitorius HOM05D005336 ORTHO05D006511 3.5e-07 60.8 106 39.6
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 3.5e-07 60.8 201 27.4
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 4.5e-07 60.5 169 32.0
Cfa011882 Carpinus fangiana HOM05D005336 ORTHO05D006511 4.5e-07 60.5 127 36.2
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 4.5e-07 60.5 313 26.2
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 4.5e-07 60.5 376 26.3
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 4.5e-07 60.5 300 27.0
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 5.9e-07 60.1 245 29.0
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 5.9e-07 60.1 413 28.8
MELO3C016357.2 Cucumis melo HOM05D005336 ORTHO05D006511 5.9e-07 60.1 116 34.5
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 5.9e-07 60.1 152 32.2
CsaV3_4G005910 Cucumis sativus L. HOM05D005336 ORTHO05D006511 7.7e-07 59.7 114 33.3
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 7.7e-07 59.7 317 25.6
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 1.0e-06 59.3 194 31.4
Gohir.D03G088700 Gossypium hirsutum HOM05D005336 ORTHO05D006511 1.0e-06 59.3 107 36.4
Lj8P558T23 Lonicera japonica HOM05D012621 ORTHO05D004349 1.0e-06 59.3 86 41.9
Gorai.003G073000 Gossypium raimondii HOM05D005336 ORTHO05D006511 1.3e-06 58.9 107 35.5
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.7e-06 58.5 99 34.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 2.3e-06 58.2 157 29.9
C09p18780 Brassica napus HOM05D005336 ORTHO05D006511 2.3e-06 58.2 109 35.8
Lj8P558T18 Lonicera japonica HOM05D012621 ORTHO05D004349 2.3e-06 58.2 88 39.8
Sabra11G0134200 Salix brachista HOM05D005336 ORTHO05D006511 2.3e-06 58.2 118 39.8
SEGI_10606 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 2.3e-06 58.2 118 36.4
BcaB07g31399 Brassica carinata HOM05D005336 ORTHO05D006511 2.9e-06 57.8 106 37.7
Hma1.2p1_0180F.1_g079790 Hydrangea macrophylla HOM05D004242 ORTHO05D004349 2.9e-06 57.8 97 37.1
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.9e-06 57.8 344 25.6
ClCG07G008170 Citrullus lanatus HOM05D005336 ORTHO05D006511 3.8e-06 57.4 110 31.8
Haze_09222 Corylus avellana HOM05D005336 ORTHO05D006511 3.8e-06 57.4 127 33.9
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 5.0e-06 57.0 311 26.7
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 5.0e-06 57.0 97 39.2
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 5.0e-06 57.0 143 35.0
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 5.0e-06 57.0 321 26.8
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 6.6e-06 56.6 373 25.7
Lalb_Chr19g0129261 Lupinus albus HOM05D005336 ORTHO05D006511 6.6e-06 56.6 109 35.8
Phvul.007G247100 Phaseolus vulgaris HOM05D005336 ORTHO05D006511 6.6e-06 56.6 110 36.4
Potri.011G149100 Populus trichocarpa HOM05D005336 ORTHO05D006511 6.6e-06 56.6 115 35.7
TAR375G0214 Trochodendron aralioides HOM05D005336 ORTHO05D006511 6.6e-06 56.6 72 44.4
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 8.6e-06 56.2 182 26.9
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 8.6e-06 56.2 432 25.9
Gohir.A12G243100 Gossypium hirsutum HOM05D005336 ORTHO05D006511 8.6e-06 56.2 146 35.6
MD06G1125100 Malus domestica HOM05D005336 ORTHO05D006511 8.6e-06 56.2 129 33.3
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 8.6e-06 56.2 367 24.3
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 8.6e-06 56.2 350 25.1
TWI15G0432 Tripterygium wilfordii HOM05D005336 ORTHO05D006511 8.6e-06 56.2 123 36.6


User provided reference genes

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