Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 5.3e-87 324.3 163 100.0
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 5.7e-73 277.7 161 83.2
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 7.7e-70 267.3 158 81.0
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 5.0e-69 264.6 161 78.3
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 8.5e-69 263.8 158 78.5
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 8.5e-69 263.8 161 78.3
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 1.1e-68 263.5 161 78.3
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 1.1e-68 263.5 161 78.3
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 1.1e-68 263.5 158 81.0
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 1.4e-68 263.1 161 78.3
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.9e-68 262.7 158 79.7
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.2e-68 261.5 160 77.5
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 4.2e-68 261.5 160 75.6
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 9.4e-68 260.4 161 77.0
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.6e-67 259.6 158 77.8
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.6e-67 259.6 160 76.9
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 2.7e-67 258.8 157 78.3
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.7e-67 258.8 161 78.3
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 3.6e-67 258.5 160 75.6
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 3.6e-67 258.5 161 77.0
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 3.6e-67 258.5 160 76.9
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 4.6e-67 258.1 161 75.8
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 6.1e-67 257.7 161 75.2
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 6.1e-67 257.7 161 78.3
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 6.1e-67 257.7 161 75.8
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 7.9e-67 257.3 157 77.7
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.0e-66 256.9 160 74.4
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 1.4e-66 256.5 158 75.3
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 1.8e-66 256.1 156 78.2
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 2.3e-66 255.8 157 77.7
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 2.3e-66 255.8 161 75.2
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 2.3e-66 255.8 157 77.7
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 2.3e-66 255.8 160 75.0
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 3.0e-66 255.4 158 77.8
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 3.0e-66 255.4 160 75.6
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 3.0e-66 255.4 158 77.2
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 3.9e-66 255.0 158 77.2
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 3.9e-66 255.0 160 75.0
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 6.7e-66 254.2 158 75.9
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 6.7e-66 254.2 159 76.7
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 6.7e-66 254.2 160 75.0
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 8.8e-66 253.8 161 73.9
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 8.8e-66 253.8 157 77.1
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 1.5e-65 253.1 157 75.8
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 1.5e-65 253.1 158 75.3
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.0e-65 252.7 160 75.0
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 2.0e-65 252.7 158 77.2
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.5e-65 252.3 159 75.5
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 2.5e-65 252.3 156 75.0
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 3.3e-65 251.9 161 75.8
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 3.3e-65 251.9 157 75.8
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 7.4e-65 250.8 159 74.8
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 9.7e-65 250.4 158 76.6
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 9.7e-65 250.4 162 71.6
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 2.2e-64 249.2 161 72.0
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 2.2e-64 249.2 158 75.3
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.2e-64 249.2 158 75.9
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 2.8e-64 248.8 157 74.5
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 8.2e-64 247.3 163 73.6
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 1.1e-63 246.9 157 75.8
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 3.1e-63 245.4 157 73.9
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 3.1e-63 245.4 159 73.0
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 9.1e-63 243.8 157 71.3
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.2e-62 243.4 157 72.0
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 1.5e-62 243.0 157 71.3
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 1.5e-62 243.0 157 73.9
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 2.0e-62 242.7 157 70.7
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 2.0e-62 242.7 157 71.3
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 3.4e-62 241.9 155 72.9
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 5.9e-62 241.1 157 71.3
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 7.7e-62 240.7 158 67.7
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 7.7e-62 240.7 157 67.5
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 1.3e-61 240.0 156 73.7
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 1.7e-61 239.6 157 70.1
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 2.2e-61 239.2 157 68.8
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 2.2e-61 239.2 157 68.8
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 2.9e-61 238.8 161 68.3
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 2.9e-61 238.8 157 68.8
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 2.9e-61 238.8 157 68.8
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 3.8e-61 238.4 157 65.6
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 5.0e-61 238.0 157 70.1
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 8.5e-61 237.3 157 68.8
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 1.4e-60 236.5 157 67.5
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 1.9e-60 236.1 157 68.2
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.9e-60 236.1 158 65.8
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 3.2e-60 235.3 160 68.1
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.2e-60 235.0 161 64.6
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.2e-60 235.0 161 64.6
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 5.5e-60 234.6 160 66.2
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 5.5e-60 234.6 157 68.8
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 7.2e-60 234.2 157 69.4
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 7.2e-60 234.2 161 64.6
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 7.2e-60 234.2 161 64.6
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 9.4e-60 233.8 156 69.2
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 9.4e-60 233.8 157 70.1
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 1.2e-59 233.4 160 70.0
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 1.2e-59 233.4 157 70.1
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 2.7e-59 232.3 161 64.6
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 3.6e-59 231.9 157 69.4
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 4.7e-59 231.5 161 62.7
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 6.1e-59 231.1 157 70.1
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 6.1e-59 231.1 157 68.8
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 3.9e-58 228.4 157 67.5
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 3.9e-58 228.4 157 67.5
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 6.7e-58 227.6 155 70.3
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 1.1e-57 226.9 160 65.0
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.5e-57 226.5 160 63.1
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 2.6e-57 225.7 157 66.9
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 3.3e-57 225.3 160 64.4
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 3.3e-57 225.3 157 66.2
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 4.4e-57 224.9 160 66.2
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 9.7e-57 223.8 157 66.9
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.3e-56 223.4 161 62.1
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 2.2e-56 222.6 161 60.9
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 2.8e-56 222.2 160 63.1
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 2.8e-56 222.2 157 64.3
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 3.7e-56 221.9 157 63.7
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.3e-56 221.1 160 63.1
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.3e-56 221.1 162 61.7
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-55 219.9 161 60.9
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.8e-55 219.5 182 56.6
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.1e-55 218.8 158 62.0
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 5.3e-55 218.0 158 63.3
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.2e-54 216.9 153 64.7
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 1.5e-54 216.5 156 62.2
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.5e-54 216.5 154 66.9
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 2.6e-54 215.7 161 68.9
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 2.6e-54 215.7 157 66.2
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 4.5e-54 214.9 180 61.1
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 7.7e-54 214.2 158 60.8
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 7.7e-54 214.2 159 61.0
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 1.0e-53 213.8 157 61.1
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 1.3e-53 213.4 157 61.1
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 1.3e-53 213.4 161 61.5
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 8.5e-53 210.7 160 60.6
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 1.1e-52 210.3 153 62.7
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 4.2e-52 208.4 157 61.1
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 5.5e-52 208.0 159 56.0
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 5.5e-52 208.0 159 59.7
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 7.2e-52 207.6 151 70.9
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 1.6e-51 206.5 159 59.1
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 1.6e-51 206.5 159 57.9
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 2.1e-51 206.1 152 61.2
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 2.1e-51 206.1 159 58.5
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 1.0e-50 203.8 157 58.6
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 3.0e-50 202.2 159 56.0
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 3.0e-50 202.2 156 57.1
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 3.9e-50 201.8 159 58.5
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 3.9e-50 201.8 159 57.9
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 2.0e-49 199.5 159 55.3
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 1.7e-48 196.4 157 59.2
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 1.8e-47 193.0 165 61.8
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 7.0e-47 191.0 157 54.1
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 4.5e-46 188.3 113 77.9
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 4.1e-39 165.2 100 73.0
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 7.7e-38 161.0 113 66.4
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 2.3e-34 149.4 128 64.8
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 1.6e-30 136.7 90 72.2
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 1.7e-29 133.3 156 42.3
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 4.0e-26 122.1 90 65.6
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 2.6e-25 119.4 69 73.9
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 3.4e-25 119.0 102 65.7
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.7e-24 116.7 81 64.2
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 3.2e-23 112.5 67 67.2
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 1.6e-22 110.2 77 70.1
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 2.9e-21 105.9 69 68.1
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 1.1e-20 104.0 77 62.3
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 1.9e-20 103.2 69 62.3
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 1.2e-19 100.5 74 59.5
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 1.0e-18 97.4 63 76.2
DCAR_000573 Daucus carota HOM05D003948 ORTHO05D004610 8.9e-18 94.4 62 69.4
ClCG09G013940 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.3e-13 80.5 56 64.3
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 8.6e-13 77.8 39 79.5
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 5.6e-12 75.1 67 49.3


User provided reference genes

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