Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2479 Erigeron canadensis HOM05D004858 ORTHO05D005600 3.1e-53 211.5 103 100.0
HanXRQChr09g0263081 Helianthus annuus HOM05D004858 ORTHO05D005600 1.0e-43 179.9 103 83.5
Lsat_1_v5_gn_2_81581 Lactuca sativa HOM05D004858 ORTHO05D005600 6.6e-43 177.2 103 83.5
HanXRQChr14g0447621 Helianthus annuus HOM05D004858 ORTHO05D005600 1.9e-42 175.6 103 83.5
HanXRQChr07g0203771 Helianthus annuus HOM05D004858 ORTHO05D005600 2.5e-42 175.3 103 83.5
ECA238G2402 Erigeron canadensis HOM05D004858 ORTHO05D005600 4.3e-42 174.5 103 84.5
Lsat_1_v5_gn_4_159121 Lactuca sativa HOM05D004858 ORTHO05D005600 9.8e-39 163.3 103 79.6
CiPaw.07G039500 Carya illinoinensis HOM05D004858 ORTHO05D005600 2.1e-36 155.6 104 73.1
CiPaw.08G148200 Carya illinoinensis HOM05D004858 ORTHO05D005600 4.6e-36 154.5 103 71.8
Eucgr.I00649 Eucalyptus grandis HOM05D004858 ORTHO05D005600 8.6e-35 150.2 101 70.3
Gohir.A11G210700 Gossypium hirsutum HOM05D004858 ORTHO05D005600 1.5e-34 149.4 101 70.3
Gohir.D11G212400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 2.5e-34 148.7 98 72.4
Gorai.007G228300 Gossypium raimondii HOM05D004858 ORTHO05D005600 2.5e-34 148.7 98 72.4
SGA_v2.0_scaffold121G33088 Striga asiatica HOM05D004858 ORTHO05D005600 2.5e-34 148.7 103 72.8
CsaV3_3G007040 Cucumis sativus L. HOM05D004858 ORTHO05D005600 3.3e-34 148.3 101 70.3
COL.COLO4_11647 Corchorus olitorius HOM05D004858 ORTHO05D005600 4.3e-34 147.9 103 69.9
Manes.12G119200 Manihot esculenta HOM05D004858 ORTHO05D005600 5.6e-34 147.5 103 70.9
Duzib187G0061 Durio zibethinus HOM05D004858 ORTHO05D005600 2.1e-33 145.6 101 67.3
Peaxi162Scf00118g01314 Petunia axillaris HOM05D004858 ORTHO05D005600 2.1e-33 145.6 101 70.3
ClCG10G008050 Citrullus lanatus HOM05D004858 ORTHO05D005600 2.8e-33 145.2 101 68.3
Gorai.003G034000 Gossypium raimondii HOM05D004858 ORTHO05D005600 2.8e-33 145.2 103 68.0
Lj4g0010254 Lotus japonicus HOM05D004858 ORTHO05D005600 2.8e-33 145.2 104 67.3
Solyc02g091880.4 Solanum lycopersicum HOM05D004858 ORTHO05D005600 2.8e-33 145.2 101 71.3
Sopen02g036450 Solanum pennellii HOM05D004858 ORTHO05D005600 2.8e-33 145.2 101 71.3
Cfa006798 Carpinus fangiana HOM05D004858 ORTHO05D005600 3.6e-33 144.8 102 65.7
CAN.G1061.6 Capsicum annuum HOM05D004858 ORTHO05D005600 8.1e-33 143.7 101 69.3
Gohir.D03G032400 Gossypium hirsutum HOM05D004858 ORTHO05D005600 8.1e-33 143.7 103 68.0
Sed0006730 Sechium edule HOM05D004858 ORTHO05D005600 8.1e-33 143.7 103 66.0
arahy.Tifrunner.gnm1.ann1.YV33P0 Arachis hypogaea HOM05D004858 ORTHO05D005600 1.1e-32 143.3 101 67.3
QL06p038187 Quercus lobata HOM05D004858 ORTHO05D005600 1.1e-32 143.3 103 66.0
VMungo0251G0206 Vigna mungo HOM05D004858 ORTHO05D005600 1.1e-32 143.3 103 67.0
Migut.L00438 Erythranthe guttata HOM05D004858 ORTHO05D005600 1.4e-32 142.9 103 72.8
unitig_37.g12385 Utricularia gibba HOM05D004858 ORTHO05D005600 1.8e-32 142.5 103 68.9
Gohir.A02G148000 Gossypium hirsutum HOM05D004858 ORTHO05D005600 2.3e-32 142.1 103 67.0
unitig_46.g18678 Utricularia gibba HOM05D004858 ORTHO05D005600 3.1e-32 141.7 106 70.8
SalBow3G1594 Salvia bowleyana HOM05D004858 ORTHO05D005600 4.0e-32 141.4 100 74.0
SalBow3G4557 Salvia bowleyana HOM05D004858 ORTHO05D005600 4.0e-32 141.4 100 74.0
Peaxi162Scf00096g01525 Petunia axillaris HOM05D004858 ORTHO05D005600 6.8e-32 140.6 102 67.6
MD02G1193900 Malus domestica HOM05D004858 ORTHO05D005600 8.9e-32 140.2 103 65.0
CSS0041224 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.2e-31 139.8 102 64.7
CSS0047057 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.2e-31 139.8 102 64.7
CANSAT01G1371 Cannabis sativa HOM05D004858 ORTHO05D005600 1.5e-31 139.4 103 66.0
Actinidia36402 Actinidia chinensis HOM05D004858 ORTHO05D005600 2.0e-31 139.0 103 68.9
CDE02G3413 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 2.0e-31 139.0 103 68.0
THA.LOC104804193 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 3.4e-31 138.3 101 66.3
MSTRG.23644 Avicennia marina HOM05D004858 ORTHO05D005600 4.4e-31 137.9 104 70.2
Dinv23069 Davidia involucrata HOM05D004858 ORTHO05D005600 4.4e-31 137.9 99 68.7
Manes.13G106700 Manihot esculenta HOM05D004858 ORTHO05D005600 4.4e-31 137.9 103 68.0
Glyma.05G110100 Glycine max HOM05D004858 ORTHO05D005600 5.8e-31 137.5 101 64.4
Lalb_Chr09g0329381 Lupinus albus HOM05D004858 ORTHO05D005600 7.5e-31 137.1 102 61.8
Glyma.17G157000 Glycine max HOM05D004858 ORTHO05D005600 9.9e-31 136.7 101 64.4
CDE01G0584 Ceratophyllum demersum HOM05D004858 ORTHO05D005600 1.7e-30 136.0 103 65.0
Hma1.2p1_1953F.1_g308860 Hydrangea macrophylla HOM05D004858 ORTHO05D005600 1.7e-30 136.0 105 63.8
Phvul.003G231600 Phaseolus vulgaris HOM05D004858 ORTHO05D005600 1.7e-30 136.0 103 64.1
Prupe.6G213100 Prunus persica HOM05D004858 ORTHO05D005600 1.7e-30 136.0 104 63.5
TWI74G1540 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 1.7e-30 136.0 103 62.1
Duzib147G0425 Durio zibethinus HOM05D004858 ORTHO05D005600 2.2e-30 135.6 103 65.0
Atru.chr3.1087 Acer truncatum HOM05D004858 ORTHO05D005600 2.9e-30 135.2 101 63.4
Lalb_Chr05g0220461 Lupinus albus HOM05D004858 ORTHO05D005600 2.9e-30 135.2 105 61.9
PGR102G0524 Punica granatum HOM05D004858 ORTHO05D005600 3.7e-30 134.8 101 67.3
FvH4_1g18620 Fragaria vesca HOM05D004858 ORTHO05D005600 6.4e-30 134.0 105 64.8
FAN19G1409 Fragaria x ananassa HOM05D004858 ORTHO05D005600 6.4e-30 134.0 105 64.8
Potri.007G008800 Populus trichocarpa HOM05D004858 ORTHO05D005600 6.4e-30 134.0 102 61.8
FAN26G1754 Fragaria x ananassa HOM05D004858 ORTHO05D005600 8.3e-30 133.7 105 64.8
Solyc03g043850.3 Solanum lycopersicum HOM05D004858 ORTHO05D005600 8.3e-30 133.7 94 68.1
GSVIVG01006593001 Vitis vinifera HOM05D004858 ORTHO05D005600 8.3e-30 133.7 103 66.0
Lalb_Chr16g0385901 Lupinus albus HOM05D004858 ORTHO05D005600 1.1e-29 133.3 103 61.2
Rhsim08G0089100 Rhododendron simsii HOM05D004858 ORTHO05D005600 1.1e-29 133.3 103 66.0
TAR628G1120 Trochodendron aralioides HOM05D004858 ORTHO05D005600 1.1e-29 133.3 102 65.7
Cpa.g.sc129.47 Carica papaya HOM05D004858 ORTHO05D005600 1.9e-29 132.5 101 63.4
Duzib264G0490 Durio zibethinus HOM05D004858 ORTHO05D005600 1.9e-29 132.5 101 62.4
THA.LOC104807646 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.9e-29 132.5 101 61.4
TPR.G22417 Trifolium pratense HOM05D004858 ORTHO05D005600 1.9e-29 132.5 102 61.8
FAN23G1848 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.4e-29 132.1 105 63.8
FAN28G0049 Fragaria x ananassa HOM05D004858 ORTHO05D005600 2.4e-29 132.1 105 63.8
Medtr4g097800 Medicago truncatula HOM05D004858 ORTHO05D005600 3.2e-29 131.7 102 59.8
Ciclev10026828m.g Citrus clementina HOM05D004858 ORTHO05D005600 4.1e-29 131.3 101 64.4
Sc16g0000840 Simmondsia chinensis HOM05D004858 ORTHO05D005600 1.2e-28 129.8 93 67.7
Ca_22084_v3 Cicer arietinum L. HOM05D004858 ORTHO05D005600 1.6e-28 129.4 106 61.3
RcHm_v2.0_Chr2g0109411 Rosa chinensis HOM05D004858 ORTHO05D005600 1.6e-28 129.4 105 62.9
Carub.0007s0239 Capsella rubella HOM05D004858 ORTHO05D005600 2.7e-28 128.6 101 62.4
Thhalv10026651m.g Eutrema salsugineum HOM05D004858 ORTHO05D005600 2.7e-28 128.6 101 62.4
Nitab4.5_0007790g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 4.6e-28 127.9 91 70.3
Os03g0772800 Oryza sativa ssp. japonica HOM05D004858 ORTHO05D005600 4.6e-28 127.9 101 62.4
arahy.Tifrunner.gnm1.ann1.J6YKXI Arachis hypogaea HOM05D004858 ORTHO05D005600 7.8e-28 127.1 99 61.6
DCAR_021459 Daucus carota HOM05D004858 ORTHO05D005600 7.8e-28 127.1 101 62.4
Sp7g35470 Schrenkiella parvula HOM05D004858 ORTHO05D005600 7.8e-28 127.1 101 61.4
EL10Ac6g14949 Beta vulgaris HOM05D004858 ORTHO05D005600 1.0e-27 126.7 95 62.1
MBI16_g31809_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 1.0e-27 126.7 98 62.2
THA.LOC104824932 Tarenaya hassleriana HOM05D004858 ORTHO05D005600 1.0e-27 126.7 101 62.4
AL7G12840 Arabidopsis lyrata HOM05D004858 ORTHO05D005600 1.3e-27 126.3 101 61.4
Nn6g34570 Nelumbo nucifera HOM05D004858 ORTHO05D005600 1.3e-27 126.3 99 63.6
Nitab4.5_0026287g0010 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.7e-27 125.9 90 71.1
TAR381G0631 Trochodendron aralioides HOM05D004858 ORTHO05D005600 2.3e-27 125.6 99 64.6
A08p22870 Brassica napus HOM05D004858 ORTHO05D005600 3.0e-27 125.2 101 61.4
CiPaw.10G150100 Carya illinoinensis HOM05D004858 ORTHO05D005600 3.0e-27 125.2 89 65.2
Aqoxy6G01531 Aquilegia oxysepala HOM05D004858 ORTHO05D005600 3.9e-27 124.8 102 58.8
MBI16_g05028_MAGBIO Magnolia biondii HOM05D004858 ORTHO05D005600 5.1e-27 124.4 92 67.4
TWI77G0309 Tripterygium wilfordii HOM05D004858 ORTHO05D005600 5.1e-27 124.4 101 60.4
Cc07_g07610 Coffea canephora HOM05D004858 ORTHO05D005600 6.6e-27 124.0 104 66.3
Haze_03960 Corylus avellana HOM05D004858 ORTHO05D005600 8.6e-27 123.6 91 64.8
AUR62007965 Chenopodium quinoa HOM05D004858 ORTHO05D005600 1.1e-26 123.2 105 61.0
CARHR246220 Cardamine hirsuta HOM05D004858 ORTHO05D005600 1.5e-26 122.9 101 59.4
AT4G37830 Arabidopsis thaliana HOM05D004858 ORTHO05D005600 2.5e-26 122.1 101 59.4
BcaC01g00373 Brassica carinata HOM05D004858 ORTHO05D005600 2.5e-26 122.1 101 61.4
BolC3t20143H Brassica oleracea HOM05D004858 ORTHO05D005600 2.5e-26 122.1 101 61.4
MD15G1304000 Malus domestica HOM05D004858 ORTHO05D005600 3.3e-26 121.7 103 60.2
DCAR_025838 Daucus carota HOM05D004858 ORTHO05D005600 4.3e-26 121.3 91 64.8
Oeu014311.1 Olea europaea HOM05D004858 ORTHO05D005600 9.5e-26 120.2 92 68.5
Oeu061526.2 Olea europaea HOM05D004858 ORTHO05D005600 9.5e-26 120.2 93 68.8
Aa31LG6G14730 Aethionema arabicum HOM05D004858 ORTHO05D005600 1.2e-25 119.8 128 50.8
PSO675G0895 Papaver somniferum HOM05D004858 ORTHO05D005600 2.1e-25 119.0 101 59.4
C01p01370 Brassica napus HOM05D004858 ORTHO05D005600 2.8e-25 118.6 101 56.4
PGSC0003DMG400017913 Solanum tuberosum HOM05D004858 ORTHO05D005600 8.1e-25 117.1 91 65.9
BolC1t00134H Brassica oleracea HOM05D004858 ORTHO05D005600 1.1e-24 116.7 101 55.4
PGSC0003DMG400030258 Solanum tuberosum HOM05D004858 ORTHO05D005600 4.0e-24 114.8 93 65.6
CSS0011371 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 6.8e-24 114.0 83 66.3
HPP92_024955 Vanilla planifolia HOM05D004858 ORTHO05D005600 6.8e-24 114.0 102 54.9
Dinv26980 Davidia involucrata HOM05D004858 ORTHO05D005600 1.5e-23 112.8 83 65.1
Thecc.01G079800 Theobroma cacao HOM05D004858 ORTHO05D005600 2.0e-23 112.5 91 62.6
Sabra07G0006800 Salix brachista HOM05D004858 ORTHO05D005600 5.8e-23 110.9 90 58.9
Nn5g30705 Nelumbo nucifera HOM05D004858 ORTHO05D005600 1.3e-22 109.8 91 61.5
Zm00001eb058950 Zea mays HOM05D004858 ORTHO05D005600 2.9e-22 108.6 93 59.1
ATR0767G115 Amborella trichopoda HOM05D004858 ORTHO05D005600 8.4e-22 107.1 90 60.0
Psat4g088320 Pisum sativum HOM05D004858 ORTHO05D005600 4.2e-21 104.8 91 58.2
PGSC0003DMG400030628 Solanum tuberosum HOM05D004858 ORTHO05D005600 1.2e-20 103.2 110 54.5
HPP92_021258 Vanilla planifolia HOM05D000682 ORTHO05D000510 3.5e-20 101.7 87 51.7
AUR62003145 Chenopodium quinoa HOM05D004858 ORTHO05D005600 1.0e-19 100.1 93 58.1
Nitab4.5_0000396g0060 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.5e-18 96.3 76 65.8
MELO3C014946.2 Cucumis melo HOM05D004858 ORTHO05D005600 9.6e-18 93.6 76 63.2
vmacro18001 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 6.2e-17 90.9 50 76.0
Nitab4.5_0002639g0030 Nicotiana tabacum HOM05D004858 ORTHO05D005600 1.1e-16 90.1 76 63.2
Mapoly0043s0104 Marchantia polymorpha HOM05D004858 ORTHO05D005600 3.1e-16 88.6 93 52.7
BraA01t00120Z Brassica rapa HOM05D004858 ORTHO05D005600 9.9e-15 83.6 104 48.1
CSS0003752 Camellia sinensis var. sinensis HOM05D004858 ORTHO05D005600 1.3e-14 83.2 76 56.6
Ah.03g139600 Amaranthus hybridus HOM05D004858 ORTHO05D005600 1.4e-13 79.7 76 57.9
Pp3c5_3360 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.2e-13 78.6 88 46.6
Sc03g0000690 Simmondsia chinensis HOM05D004858 ORTHO05D005600 1.6e-12 76.3 77 59.7
BraA08t34250Z Brassica rapa HOM05D004858 ORTHO05D005600 4.6e-12 74.7 76 53.9
Hund16598 Selenicereus undatus HOM05D004858 ORTHO05D005600 4.6e-12 74.7 78 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1653 Anthoceros agrestis HOM05D004858 ORTHO05D005600 2.3e-11 72.4 88 43.2
C03p79020 Brassica napus HOM05D004858 ORTHO05D005600 6.6e-11 70.9 76 52.6
CBR_g50891 Chara braunii HOM05D004858 ORTHO05D005600 3.3e-10 68.6 107 37.4
Pp3c13_15160 Physcomitrium patens HOM05D004858 ORTHO05D005600 1.6e-09 66.2 86 44.2
Pp3c6_25050 Physcomitrium patens HOM05D004858 ORTHO05D005600 3.1e-08 62.0 79 40.5
vmacro22430 Vaccinium macrocarpon HOM05D004858 ORTHO05D005600 9.0e-08 60.5 35 71.4
PRCOL_00006369 Prasinoderma coloniale HOM05D004858 ORTHO05D005600 9.9e-07 57.0 70 40.0
SEGI_12659 Sequoiadendron giganteum HOM05D004858 ORTHO05D005600 1.3e-06 56.6 51 52.9
SHI12046 Sapria himalayana HOM05D004858 ORTHO05D005600 8.4e-06 53.9 35 62.9


User provided reference genes

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