Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 0.0e+00 1275.8 683 100.0
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 1.6e-294 1015.8 686 79.4
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 5.1e-285 984.2 670 79.1
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 2.3e-245 852.4 705 67.1
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.8e-237 826.2 723 65.3
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 2.0e-236 822.8 721 64.9
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 3.7e-235 818.5 717 64.6
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 2.4e-234 815.8 710 63.8
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 2.5e-231 805.8 707 63.9
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 3.3e-231 805.4 729 64.2
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 9.5e-231 803.9 713 63.0
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 3.6e-230 802.0 734 64.0
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 1.4e-229 800.0 711 63.6
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.8e-229 799.7 708 63.8
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 4.0e-229 798.5 711 63.6
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 5.2e-229 798.1 705 62.6
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 4.4e-228 795.0 709 62.8
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.3e-227 793.5 729 63.5
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 1.3e-227 793.5 722 60.5
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 2.9e-227 792.3 712 61.9
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 3.7e-227 792.0 732 63.1
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 1.9e-226 789.6 710 62.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.9e-226 789.6 722 62.7
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 7.1e-226 787.7 711 63.3
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 9.2e-226 787.3 691 63.1
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.6e-225 786.6 711 61.7
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 6.0e-225 784.6 730 63.3
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 7.8e-225 784.3 711 62.9
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 1.3e-224 783.5 719 62.4
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 6.6e-224 781.2 709 61.6
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.1e-223 780.4 706 63.5
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 2.5e-223 779.2 726 62.0
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 7.3e-223 777.7 706 62.5
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 7.3e-223 777.7 723 62.7
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 7.3e-223 777.7 702 62.3
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 9.5e-223 777.3 733 62.2
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 9.5e-223 777.3 709 61.2
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 4.7e-222 775.0 703 63.6
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 3.1e-221 772.3 704 62.6
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.2e-220 770.4 706 61.8
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.3e-219 766.9 699 62.2
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 1.3e-219 766.9 703 60.6
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.2e-219 766.1 723 62.0
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 3.8e-219 765.4 718 62.8
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 4.9e-219 765.0 713 59.9
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 8.4e-219 764.2 718 62.7
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 3.2e-218 762.3 694 61.1
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.1e-218 761.9 704 60.7
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 5.4e-218 761.5 718 62.4
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 1.2e-217 760.4 698 60.9
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 1.6e-217 760.0 718 62.0
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.1e-217 759.6 718 62.1
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 2.7e-217 759.2 679 62.4
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 6.0e-217 758.1 703 59.6
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.7e-216 756.5 679 62.4
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.7e-216 756.5 716 60.9
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.7e-216 756.5 715 61.3
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 3.0e-216 755.7 712 61.2
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 5.1e-216 755.0 719 61.2
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.2e-214 750.4 679 61.9
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 2.8e-214 749.2 718 60.2
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.8e-213 746.5 715 59.4
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 1.8e-213 746.5 715 60.3
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 6.9e-213 744.6 693 60.2
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.4e-212 741.9 704 60.5
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 5.8e-212 741.5 698 62.8
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.3e-211 740.3 796 55.8
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.3e-211 740.3 721 60.2
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.7e-211 740.0 692 61.4
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 7.1e-210 734.6 713 58.5
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 3.0e-208 729.2 711 57.9
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 5.1e-208 728.4 936 50.0
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 7.3e-207 724.5 732 59.3
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 1.2e-204 717.2 637 62.5
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 2.0e-204 716.5 712 58.7
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.6e-201 706.8 723 58.6
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 6.9e-197 691.4 925 48.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 1.5e-196 690.3 703 57.5
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 9.3e-194 681.0 697 55.7
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.7e-193 679.5 713 55.1
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.0e-192 677.6 747 54.6
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 3.0e-192 676.0 725 56.3
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 1.5e-191 673.7 703 54.9
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 4.3e-191 672.2 689 55.6
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 4.3e-191 672.2 706 56.1
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 2.1e-190 669.8 689 55.6
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 1.4e-189 667.2 690 55.5
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 5.3e-189 665.2 693 54.8
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 2.0e-188 663.3 706 55.7
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 4.9e-187 658.7 687 55.3
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 1.2e-185 654.1 717 53.1
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 2.7e-185 652.9 704 54.4
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 4.6e-185 652.1 711 53.3
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 3.0e-184 649.4 596 62.1
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 1.3e-182 644.0 713 54.3
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.8e-179 632.5 604 58.6
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 1.9e-178 630.2 609 58.0
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.5e-175 619.8 546 64.1
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 3.2e-170 602.8 573 60.4
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 1.0e-160 571.2 547 61.1
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.8e-158 563.1 583 57.8
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 1.7e-150 537.3 571 55.0
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 3.7e-150 536.2 693 49.2
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 1.5e-146 524.2 532 57.5
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 3.5e-132 476.5 494 57.3
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 3.1e-120 436.8 754 39.3
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 3.7e-118 429.9 777 37.1
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 5.6e-106 389.4 674 37.7
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 3.4e-95 353.6 291 63.6
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 4.6e-92 343.2 265 66.4
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.1e-80 305.4 422 46.4
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 4.5e-71 273.5 463 43.6
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 3.9e-67 260.4 424 40.3
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 5.1e-59 233.4 291 49.1
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.8e-56 224.9 187 62.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 6.1e-52 209.9 275 46.5
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 1.8e-48 198.4 181 56.9
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 7.2e-45 186.4 358 36.9
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 9.4e-45 186.0 153 70.6
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 3.3e-42 177.6 182 51.1
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 6.3e-41 173.3 140 67.9
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.8e-32 145.2 126 71.4
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 2.7e-31 141.4 133 63.9
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 3.8e-30 137.5 97 70.1
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 2.5e-29 134.8 126 61.9
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.7e-25 122.1 108 70.4
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 7.2e-21 106.7 109 50.5
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 3.6e-20 104.4 105 57.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.2e-10 72.8 144 39.6
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 6.6e-06 57.0 35 80.0


User provided reference genes

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