Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 7.0e-63 243.8 126 100.0
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 6.6e-45 184.1 101 86.1
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.1e-44 183.3 96 90.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 2.0e-41 172.6 111 73.9
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 2.6e-41 172.2 109 74.3
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 9.8e-41 170.2 112 75.0
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 2.2e-40 169.1 112 68.8
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 3.7e-40 168.3 96 79.2
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 3.7e-40 168.3 98 81.6
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 4.9e-40 167.9 112 71.4
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 4.9e-40 167.9 112 71.4
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 4.9e-40 167.9 101 77.2
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 6.4e-40 167.5 97 80.4
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 6.4e-40 167.5 112 70.5
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 8.3e-40 167.2 111 73.9
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.1e-39 166.8 112 73.2
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 1.4e-39 166.4 96 80.2
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.4e-39 166.4 109 71.6
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 3.2e-39 165.2 97 79.4
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 4.1e-39 164.9 98 79.6
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 5.4e-39 164.5 99 77.8
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 9.2e-39 163.7 96 80.2
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.6e-38 162.9 117 67.5
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.6e-38 162.9 117 67.5
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.6e-38 162.9 96 79.2
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 3.5e-38 161.8 112 68.8
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 6.0e-38 161.0 111 68.5
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 6.0e-38 161.0 97 77.3
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 7.8e-38 160.6 98 75.5
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 7.8e-38 160.6 97 77.3
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 1.0e-37 160.2 97 78.4
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 1.0e-37 160.2 99 75.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 1.0e-37 160.2 99 75.8
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.3e-37 159.8 127 67.7
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.3e-37 159.8 97 77.3
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 1.7e-37 159.5 99 75.8
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.3e-37 159.1 96 77.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 2.3e-37 159.1 112 70.5
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 3.0e-37 158.7 103 71.8
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 3.9e-37 158.3 127 63.8
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 3.9e-37 158.3 97 75.3
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 3.9e-37 158.3 113 64.6
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 5.1e-37 157.9 97 77.3
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 5.1e-37 157.9 97 78.4
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 5.1e-37 157.9 97 77.3
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 5.1e-37 157.9 97 76.3
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 6.6e-37 157.5 108 70.4
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 6.6e-37 157.5 102 72.5
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 6.6e-37 157.5 97 75.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 8.6e-37 157.1 100 73.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 1.1e-36 156.8 99 71.7
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.5e-36 156.4 111 65.8
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 2.5e-36 155.6 105 74.3
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 3.3e-36 155.2 111 64.9
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 3.3e-36 155.2 112 67.9
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 4.3e-36 154.8 110 66.4
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 4.3e-36 154.8 102 72.5
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 5.6e-36 154.5 99 76.8
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 5.6e-36 154.5 99 76.8
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 7.3e-36 154.1 105 74.3
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 7.3e-36 154.1 97 74.2
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 7.3e-36 154.1 97 74.2
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 7.3e-36 154.1 97 74.2
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 7.3e-36 154.1 97 74.2
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 7.3e-36 154.1 102 70.6
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 9.5e-36 153.7 103 71.8
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 9.5e-36 153.7 98 75.5
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 9.5e-36 153.7 94 78.7
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.2e-35 153.3 97 72.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 1.6e-35 152.9 104 70.2
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.1e-35 152.5 97 70.1
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 2.8e-35 152.1 112 66.1
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 2.8e-35 152.1 112 66.1
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 3.6e-35 151.8 112 66.1
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 3.6e-35 151.8 112 66.1
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 3.6e-35 151.8 112 66.1
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.7e-35 151.4 97 73.2
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 6.2e-35 151.0 100 71.0
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 6.2e-35 151.0 98 72.4
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 8.1e-35 150.6 111 66.7
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.4e-34 149.8 97 74.2
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 6.8e-34 147.5 118 59.3
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 8.9e-34 147.1 113 65.5
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 8.9e-34 147.1 130 58.5
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 2.6e-33 145.6 82 81.7
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 8.4e-32 140.6 89 74.2
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 1.6e-30 136.3 106 58.5
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.8e-27 125.6 95 57.9
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 5.2e-26 121.3 95 66.3
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 8.9e-26 120.6 84 66.7
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 8.9e-26 120.6 99 56.6
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.3e-24 116.7 94 62.8
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 4.9e-24 114.8 111 48.6
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.6e-22 109.8 94 47.9
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 3.9e-21 105.1 60 81.7
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.1e-20 103.6 64 78.1
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 2.5e-20 102.4 93 53.8
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 2.1e-14 82.8 77 46.8
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 1.6e-11 73.2 80 37.5
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 1.6e-06 56.6 49 57.1


User provided reference genes

Program Settings