Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2276 Erigeron canadensis HOM05D003913 ORTHO05D004803 1.9e-111 406.8 391 100.0
ECA236G4407 Erigeron canadensis HOM05D003913 ORTHO05D004803 5.7e-87 325.5 377 58.6
Lsat_1_v5_gn_9_43060 Lactuca sativa HOM05D003913 ORTHO05D004803 3.8e-83 312.8 392 85.5
HanXRQChr11g0320411 Helianthus annuus HOM05D003913 ORTHO05D004803 5.9e-76 288.9 393 83.7
Dinv13071 Davidia involucrata HOM05D003913 ORTHO05D004803 2.2e-75 287.0 391 56.0
Dinv44716 Davidia involucrata HOM05D003913 ORTHO05D004803 3.2e-74 283.1 391 58.6
CSS0047372 Camellia sinensis var. sinensis HOM05D003913 ORTHO05D004803 9.4e-74 281.6 394 82.0
Nn3g16733 Nelumbo nucifera HOM05D003913 ORTHO05D004803 3.1e-69 266.5 391 79.8
Oeu053831.1 Olea europaea HOM05D003913 ORTHO05D004803 7.7e-68 261.9 387 73.9
PGR031G2719 Punica granatum HOM05D003913 ORTHO05D004803 6.1e-65 252.3 390 72.8
TWI12G0147 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 8.0e-65 251.9 390 77.4
Lalb_Chr20g0121511 Lupinus albus HOM05D003913 ORTHO05D004803 1.4e-64 251.1 383 47.5
TWI75G1061 Tripterygium wilfordii HOM05D003913 ORTHO05D004803 2.6e-63 246.9 386 78.5
Potri.019G087200 Populus trichocarpa HOM05D003913 ORTHO05D004803 7.5e-63 245.4 383 72.3
Rhsim04G0038100 Rhododendron simsii HOM05D003913 ORTHO05D004803 7.5e-63 245.4 414 74.2
Lj5g0008809 Lotus japonicus HOM05D003913 ORTHO05D004803 2.2e-62 243.8 386 42.7
Sed0012824 Sechium edule HOM05D003913 ORTHO05D004803 4.8e-62 242.7 388 64.9
Manes.02G188000 Manihot esculenta HOM05D003913 ORTHO05D004803 1.8e-61 240.7 385 72.2
CDE08G0059 Ceratophyllum demersum HOM05D003913 ORTHO05D004803 3.1e-61 240.0 383 71.5
GSVIVG01015205001 Vitis vinifera HOM05D003913 ORTHO05D004803 7.0e-61 238.8 395 60.3
Actinidia29569 Actinidia chinensis HOM05D003913 ORTHO05D004803 1.6e-60 237.7 393 72.8
CsaV3_6G002750 Cucumis sativus L. HOM05D003913 ORTHO05D004803 2.7e-60 236.9 391 71.4
LjContig00222g0022410 Lotus japonicus HOM05D003913 ORTHO05D004803 2.7e-60 236.9 386 45.9
Prupe.8G049100 Prunus persica HOM05D003913 ORTHO05D004803 2.7e-60 236.9 383 72.6
TAR625G1217 Trochodendron aralioides HOM05D003913 ORTHO05D004803 3.5e-60 236.5 386 76.2
ClCG08G002560 Citrullus lanatus HOM05D003913 ORTHO05D004803 4.5e-60 236.1 391 71.4
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 7.7e-60 235.3 374 43.0
MELO3C024997.2 Cucumis melo HOM05D003913 ORTHO05D004803 1.0e-59 235.0 391 71.1
RcHm_v2.0_Chr6g0272901 Rosa chinensis HOM05D003913 ORTHO05D004803 1.0e-59 235.0 384 78.1
FvH4_2g12470 Fragaria vesca HOM05D003913 ORTHO05D004803 1.3e-59 234.6 385 79.5
Lj4A109T49 Lonicera japonica HOM05D003913 ORTHO05D004803 2.2e-59 233.8 392 73.7
Ciclev10008663m.g Citrus clementina HOM05D003913 ORTHO05D004803 3.8e-59 233.0 383 71.5
FAN24G0738 Fragaria x ananassa HOM05D003913 ORTHO05D004803 8.5e-59 231.9 385 79.5
Cc11_g02860 Coffea canephora HOM05D003913 ORTHO05D004803 1.1e-58 231.5 384 71.9
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 1.5e-58 231.1 374 42.5
Lj2C196T3 Lonicera japonica HOM05D003913 ORTHO05D004803 4.2e-58 229.6 395 48.4
Aa31LG4G8790 Aethionema arabicum HOM05D003913 ORTHO05D004803 7.2e-58 228.8 409 66.5
BcaC08g46615 Brassica carinata HOM05D003913 ORTHO05D004803 7.2e-58 228.8 387 67.2
AT1G71840 Arabidopsis thaliana HOM05D003913 ORTHO05D004803 8.0e-57 225.3 394 68.5
CiPaw.15G007000 Carya illinoinensis HOM05D003913 ORTHO05D004803 1.0e-56 224.9 388 68.0
FvH4_5g22350 Fragaria vesca HOM05D003913 ORTHO05D004803 1.4e-56 224.6 378 71.7
FAN18G2025 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.4e-56 224.6 378 71.7
FAN18G2798 Fragaria x ananassa HOM05D003913 ORTHO05D004803 1.4e-56 224.6 378 71.7
Aqoxy1G00206 Aquilegia oxysepala HOM05D003913 ORTHO05D004803 1.8e-56 224.2 387 66.7
AL2G31420 Arabidopsis lyrata HOM05D003913 ORTHO05D004803 1.8e-56 224.2 394 66.2
C06p45910 Brassica napus HOM05D003913 ORTHO05D004803 2.3e-56 223.8 382 67.8
Ca_30575_v3 Cicer arietinum L. HOM05D003913 ORTHO05D004803 2.3e-56 223.8 384 43.2
SalBow7G2889 Salvia bowleyana HOM05D003913 ORTHO05D004803 2.3e-56 223.8 393 63.6
Glyma.20G173100 Glycine max HOM05D003913 ORTHO05D004803 3.0e-56 223.4 381 52.0
Hund19608 Selenicereus undatus HOM05D003913 ORTHO05D004803 3.0e-56 223.4 429 65.3
MD07G1041000 Malus domestica HOM05D003913 ORTHO05D004803 5.2e-56 222.6 395 69.9
Nitab4.5_0002890g0020 Nicotiana tabacum HOM05D003913 ORTHO05D004803 5.2e-56 222.6 348 50.9
FAN08G0696 Fragaria x ananassa HOM05D003913 ORTHO05D004803 2.0e-55 220.7 378 71.2
ATR0001G003 Amborella trichopoda HOM05D003913 ORTHO05D004803 2.6e-55 220.3 343 54.5
PSO675G8150 Papaver somniferum HOM05D003913 ORTHO05D004803 2.6e-55 220.3 399 75.4
RcHm_v2.0_Chr7g0210071 Rosa chinensis HOM05D003913 ORTHO05D004803 2.6e-55 220.3 378 71.7
THA.LOC104826775 Tarenaya hassleriana HOM05D003913 ORTHO05D004803 3.4e-55 219.9 394 68.3
MD02G1272000 Malus domestica HOM05D003913 ORTHO05D004803 4.4e-55 219.5 383 72.6
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 7.5e-55 218.8 382 48.7
BcaB03g15621 Brassica carinata HOM05D003913 ORTHO05D004803 1.3e-54 218.0 397 62.7
VMungo1080G1176 Vigna mungo HOM05D003913 ORTHO05D004803 1.3e-54 218.0 388 53.6
Phvul.011G104600 Phaseolus vulgaris HOM05D003913 ORTHO05D004803 1.7e-54 217.6 388 57.2
EL10Ac6g15251 Beta vulgaris HOM05D003913 ORTHO05D004803 2.2e-54 217.2 395 76.5
MBI10_g42737_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 3.7e-54 216.5 345 82.3
BcaC08g45753 Brassica carinata HOM05D003913 ORTHO05D004803 6.3e-54 215.7 397 66.2
Thhalv10018505m.g Eutrema salsugineum HOM05D003913 ORTHO05D004803 6.3e-54 215.7 381 69.0
Sed0004416 Sechium edule HOM05D003913 ORTHO05D004803 8.3e-54 215.3 385 70.1
CANSAT25G1043 Cannabis sativa HOM05D003913 ORTHO05D004803 1.2e-52 211.5 392 67.9
CARHR290910 Cardamine hirsuta HOM05D003913 ORTHO05D004803 1.6e-52 211.1 394 59.9
Nitab4.5_0000366g0190 Nicotiana tabacum HOM05D003913 ORTHO05D004803 7.7e-52 208.8 389 68.6
BolC6t38638H Brassica oleracea HOM05D003913 ORTHO05D004803 1.3e-51 208.0 407 48.4
Sp5g26870 Schrenkiella parvula HOM05D003913 ORTHO05D004803 2.3e-51 207.2 395 64.1
SpUn0020_0100 Schrenkiella parvula HOM05D003913 ORTHO05D004803 2.3e-51 207.2 395 64.1
PSO541G3150 Papaver somniferum HOM05D003913 ORTHO05D004803 3.8e-51 206.5 360 73.3
A07p37990 Brassica napus HOM05D003913 ORTHO05D004803 5.0e-51 206.1 395 59.7
BolC6t39643H Brassica oleracea HOM05D003913 ORTHO05D004803 1.1e-50 204.9 384 65.9
BraA07t30691Z Brassica rapa HOM05D003913 ORTHO05D004803 1.1e-50 204.9 407 56.8
Sabra19G0101300 Salix brachista HOM05D003913 ORTHO05D004803 1.5e-50 204.5 389 75.8
HPP92_008098 Vanilla planifolia HOM05D003913 ORTHO05D004803 4.3e-50 203.0 392 70.4
GSVIVG01001592001 Vitis vinifera HOM05D003913 ORTHO05D004803 4.3e-50 203.0 386 72.0
C06p35320 Brassica napus HOM05D003913 ORTHO05D004803 5.6e-50 202.6 421 56.3
Potri.013G116900 Populus trichocarpa HOM05D003913 ORTHO05D004803 5.6e-50 202.6 395 60.0
Gorai.006G187200 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.6e-49 201.1 395 40.5
Atru.chr13.1880 Acer truncatum HOM05D003913 ORTHO05D004803 2.1e-49 200.7 389 67.6
A07p30560 Brassica napus HOM05D003913 ORTHO05D004803 2.1e-49 200.7 421 42.5
FAN04G3257 Fragaria x ananassa HOM05D003913 ORTHO05D004803 2.1e-49 200.7 412 58.5
Rhsim06G0087400 Rhododendron simsii HOM05D003913 ORTHO05D004803 2.1e-49 200.7 487 61.8
AUR62017935 Chenopodium quinoa HOM05D003913 ORTHO05D004803 3.6e-49 199.9 396 66.9
Gohir.D09G165400 Gossypium hirsutum HOM05D003913 ORTHO05D004803 3.6e-49 199.9 395 40.3
Sabra19G0097800 Salix brachista HOM05D003913 ORTHO05D004803 4.7e-49 199.5 389 75.8
VMungo0720G0336 Vigna mungo HOM05D003913 ORTHO05D004803 6.1e-49 199.1 390 53.1
Zm00001eb362180 Zea mays HOM05D003913 ORTHO05D004803 6.1e-49 199.1 390 57.4
Gohir.A09G169700 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.4e-48 198.0 395 44.8
Oeu053830.1 Olea europaea HOM05D003913 ORTHO05D004803 2.3e-48 197.2 385 67.8
PGSC0003DMG400028735 Solanum tuberosum HOM05D003913 ORTHO05D004803 4.0e-48 196.4 389 67.9
Sc16g0003970 Simmondsia chinensis HOM05D003913 ORTHO05D004803 5.2e-48 196.1 338 79.0
Sabra13G0099000 Salix brachista HOM05D003913 ORTHO05D004803 8.9e-48 195.3 386 67.9
BraA07t31364Z Brassica rapa HOM05D003913 ORTHO05D004803 2.6e-47 193.7 385 64.2
Solyc07g008860.3 Solanum lycopersicum HOM05D003913 ORTHO05D004803 2.6e-47 193.7 389 68.1
Sopen07g004790 Solanum pennellii HOM05D003913 ORTHO05D004803 3.4e-47 193.4 389 68.1
Hma1.2p1_0276F.1_g111300 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 4.4e-47 193.0 313 78.3
Psat6g188560 Pisum sativum HOM05D000168 ORTHO05D004803 4.4e-47 193.0 370 34.6
Zm00001eb139680 Zea mays HOM05D003913 ORTHO05D004803 9.8e-47 191.8 389 67.1
Gohir.D06G113300 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.3e-46 191.4 392 42.9
Gorai.010G129100 Gossypium raimondii HOM05D003913 ORTHO05D004803 1.3e-46 191.4 392 42.6
Carub.0002s1860 Capsella rubella HOM05D003913 ORTHO05D004803 7.0e-45 185.7 394 64.7
Os03g0685600 Oryza sativa ssp. japonica HOM05D003913 ORTHO05D004803 1.6e-44 184.5 387 59.4
Medtr1g097140 Medicago truncatula HOM05D003913 ORTHO05D004803 3.5e-44 183.3 380 32.6
Nitab4.5_0002890g0010 Nicotiana tabacum HOM05D003913 ORTHO05D004803 1.7e-43 181.0 328 47.6
DCAR_004603 Daucus carota HOM05D000366 ORTHO05D000437 1.5e-42 177.9 279 83.9
Ah.03g146560 Amaranthus hybridus HOM05D003913 ORTHO05D004803 2.5e-42 177.2 389 65.0
FAN20G2057 Fragaria x ananassa HOM05D003913 ORTHO05D004803 3.3e-42 176.8 309 61.8
Cfa018220 Carpinus fangiana HOM05D003913 ORTHO05D004803 7.3e-42 175.6 341 73.3
TPR.G30584 Trifolium pratense HOM05D003913 ORTHO05D004803 1.2e-41 174.9 397 37.8
Thecc.08G198300 Theobroma cacao HOM05D003913 ORTHO05D004803 2.1e-41 174.1 398 37.7
arahy.Tifrunner.gnm1.ann1.A7TGXU Arachis hypogaea HOM05D003913 ORTHO05D004803 2.8e-41 173.7 411 34.8
Migut.J01123 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.0e-40 171.8 398 41.0
MSTRG.9615 Avicennia marina HOM05D003913 ORTHO05D004803 3.1e-40 170.2 393 59.3
SGA_v2.0_scaffold114G31919 Striga asiatica HOM05D003913 ORTHO05D004803 2.0e-39 167.5 343 63.6
unitig_747.g21315 Utricularia gibba HOM05D003913 ORTHO05D004803 2.6e-39 167.2 386 39.9
Duzib211G0424 Durio zibethinus HOM05D003913 ORTHO05D004803 3.4e-39 166.8 398 44.7
SEGI_39165 Sequoiadendron giganteum HOM05D003913 ORTHO05D004803 3.4e-39 166.8 385 65.2
Aa31LG7G6630 Aethionema arabicum HOM05D003913 ORTHO05D004803 1.7e-38 164.5 400 30.8
TAR381G0993 Trochodendron aralioides HOM05D003913 ORTHO05D004803 2.9e-38 163.7 278 81.7
MBI10_g41322_MAGBIO Magnolia biondii HOM05D003913 ORTHO05D004803 1.1e-37 161.8 116 66.4
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.9e-37 161.0 115 72.2
Gohir.A06G109200 Gossypium hirsutum HOM05D003913 ORTHO05D004803 1.9e-37 161.0 363 37.2
Cpa.g.sc2399.1 Carica papaya HOM05D003913 ORTHO05D004803 1.2e-36 158.3 112 66.1
Migut.D01748 Erythranthe guttata HOM05D003913 ORTHO05D004803 4.6e-36 156.4 344 69.5
AUR62003626 Chenopodium quinoa HOM05D003913 ORTHO05D004803 8.6e-35 152.1 109 66.1
Eucgr.E02330 Eucalyptus grandis HOM05D003913 ORTHO05D004803 8.6e-35 152.1 279 76.7
QL02p034830 Quercus lobata HOM05D003913 ORTHO05D004803 1.5e-34 151.4 105 68.6
EL10Ac9g21859 Beta vulgaris HOM05D003913 ORTHO05D004803 4.7e-33 146.4 330 37.3
CANSAT11G1897 Cannabis sativa HOM05D003913 ORTHO05D004803 4.7e-33 146.4 106 67.0
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 6.2e-33 146.0 393 28.2
COL.COLO4_03395 Corchorus olitorius HOM05D003913 ORTHO05D004803 1.1e-32 145.2 116 62.1
Pp3c14_20020 Physcomitrium patens HOM05D003913 ORTHO05D004803 1.1e-32 145.2 397 59.7
Glyma.10G218600 Glycine max HOM05D003913 ORTHO05D004803 6.4e-30 136.0 111 59.5
AagrBONN_evm.TU.Sc2ySwM_368.376 Anthoceros agrestis HOM05D003913 ORTHO05D004803 8.3e-30 135.6 400 60.0
COL.COLO4_13734 Corchorus olitorius HOM05D003913 ORTHO05D004803 4.1e-29 133.3 337 38.9
Psat6g019720 Pisum sativum HOM05D003913 ORTHO05D004803 2.1e-28 131.0 112 58.9
Migut.I00088 Erythranthe guttata HOM05D003913 ORTHO05D004803 1.7e-27 127.9 407 40.8
vmacro21210 Vaccinium macrocarpon HOM05D003913 ORTHO05D004803 5.1e-27 126.3 414 56.8
Haze_17883 Corylus avellana HOM05D003913 ORTHO05D004803 6.6e-27 125.9 483 55.9
SMO347G0114 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 2.5e-26 124.0 395 41.0
AUR62001664 Chenopodium quinoa HOM05D003913 ORTHO05D004803 5.6e-26 122.9 346 26.6
Peaxi162Scf01838g00003 Petunia axillaris HOM05D000173 ORTHO05D000316 5.6e-26 122.9 116 54.3
AUR62024845 Chenopodium quinoa HOM05D003913 ORTHO05D004803 7.3e-26 122.5 383 26.6
Hma1.2p1_0276F.1_g111310 Hydrangea macrophylla HOM05D003913 ORTHO05D004803 6.2e-25 119.4 125 51.2
CARHR124080 Cardamine hirsuta HOM05D003913 ORTHO05D004803 8.1e-25 119.0 371 26.1
Glyma.09G057500 Glycine max HOM05D003913 ORTHO05D004803 1.1e-24 118.6 173 37.6
Glyma.10G218500 Glycine max HOM05D003913 ORTHO05D004803 8.9e-24 115.5 123 46.3
Mapoly0155s0005 Marchantia polymorpha HOM05D003913 ORTHO05D004803 9.9e-23 112.1 397 32.0
PSO455G0073 Papaver somniferum HOM05D003913 ORTHO05D004803 1.7e-19 101.3 64 70.3
Psat6g021120 Pisum sativum HOM05D003913 ORTHO05D004803 1.7e-19 101.3 120 43.3
Lj4C56G20 Lonicera japonica HOM05D003913 ORTHO05D004803 2.1e-17 94.4 59 69.5
Medtr7g111550 Medicago truncatula HOM05D003913 ORTHO05D004803 1.1e-16 92.0 105 45.7
Medtr7g079470 Medicago truncatula HOM05D003913 ORTHO05D004803 5.8e-15 86.3 65 63.1
Thecc.09G236800 Theobroma cacao HOM05D003913 ORTHO05D004803 1.3e-14 85.1 56 67.9
SMO343G0013 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 2.9e-14 84.0 113 39.8
SHI13909 Sapria himalayana HOM05D003913 ORTHO05D004803 6.4e-14 82.8 94 44.7
Cre12.g487200 Chlamydomonas reinhardtii HOM05D003913 ORTHO05D004803 8.4e-14 82.4 349 26.6
BolC6t38649H Brassica oleracea HOM05D003913 ORTHO05D004803 7.1e-13 79.3 112 39.3
SMO367G0065 Selaginella moellendorffii HOM05D003913 ORTHO05D004803 2.1e-12 77.8 358 24.6
BraA02t06789Z Brassica rapa HOM05D003913 ORTHO05D004803 7.8e-12 75.9 54 61.1
A02p17440 Brassica napus HOM05D003913 ORTHO05D004803 3.0e-11 73.9 54 59.3
MCO10G384 Micromonas commoda HOM05D003913 ORTHO05D004803 3.9e-11 73.6 122 33.6
Glyma.17G173200 Glycine max HOM05D003913 ORTHO05D004803 8.7e-11 72.4 42 71.4
CBR_g49506 Chara braunii HOM05D003913 ORTHO05D004803 1.5e-10 71.6 391 56.5
Cpa.g.sc66.118 Carica papaya HOM05D003913 ORTHO05D004411 7.6e-07 59.3 30 80.0


User provided reference genes

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