Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 3.9e-113 411.8 256 100.0
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 2.4e-49 199.9 218 58.7
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 4.2e-46 189.1 164 66.5
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 8.7e-36 154.8 196 51.5
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 1.8e-33 147.1 125 67.2
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 5.8e-32 142.1 182 52.2
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 3.8e-31 139.4 213 46.9
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 8.4e-31 138.3 156 55.8
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 1.1e-30 137.9 209 46.9
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 3.2e-30 136.3 235 42.1
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 1.6e-29 134.0 201 46.3
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 1.6e-29 134.0 217 45.2
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 2.1e-29 133.7 174 50.0
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 2.7e-29 133.3 138 57.2
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 4.6e-29 132.5 163 52.1
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 1.3e-28 131.0 208 45.7
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 3.0e-28 129.8 216 42.1
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 6.7e-28 128.6 191 46.6
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 6.7e-28 128.6 173 48.6
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 8.7e-28 128.3 126 59.5
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 1.5e-27 127.5 216 43.5
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 1.5e-27 127.5 187 46.5
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 1.9e-27 127.1 168 50.0
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 1.9e-27 127.1 213 42.3
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 4.3e-27 125.9 195 46.7
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 4.3e-27 125.9 182 48.4
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 5.6e-27 125.6 145 52.4
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 5.6e-27 125.6 180 48.9
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 7.4e-27 125.2 213 42.3
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 1.3e-26 124.4 158 48.7
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 1.3e-26 124.4 172 48.8
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.3e-26 124.4 205 43.9
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 2.1e-26 123.6 205 41.5
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 2.1e-26 123.6 198 45.5
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.1e-26 123.6 206 43.2
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 3.7e-26 122.9 200 45.5
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 6.2e-26 122.1 205 43.4
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 8.2e-26 121.7 215 44.2
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.1e-25 121.3 215 44.2
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 2.4e-25 120.2 208 40.9
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 2.4e-25 120.2 194 43.8
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 3.1e-25 119.8 181 44.8
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 5.3e-25 119.0 183 45.4
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 5.3e-25 119.0 204 42.6
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 6.9e-25 118.6 170 43.5
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 6.9e-25 118.6 107 59.8
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 9.0e-25 118.2 190 42.1
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 9.0e-25 118.2 203 43.8
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.6e-24 116.7 172 47.1
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 3.4e-24 116.3 226 38.5
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 4.5e-24 115.9 181 47.0
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 5.8e-24 115.5 162 47.5
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 7.6e-24 115.2 156 50.6
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 7.6e-24 115.2 195 46.7
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 7.6e-24 115.2 136 51.5
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 1.0e-23 114.8 164 47.0
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 2.9e-23 113.2 159 47.2
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 2.9e-23 113.2 142 54.2
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 4.9e-23 112.5 154 48.7
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 6.5e-23 112.1 164 46.3
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.9e-22 110.5 188 39.9
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 2.5e-22 110.2 179 44.7
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 4.2e-22 109.4 191 42.9
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 4.2e-22 109.4 160 45.6
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 4.2e-22 109.4 173 45.7
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 5.5e-22 109.0 191 43.5
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 5.5e-22 109.0 167 43.7
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 7.1e-22 108.6 162 45.1
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.2e-21 107.8 122 53.3
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 1.2e-21 107.8 174 42.5
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 1.2e-21 107.8 225 36.0
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 1.6e-21 107.5 196 41.8
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.1e-21 107.1 188 41.5
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 2.7e-21 106.7 191 43.5
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 3.5e-21 106.3 181 44.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 4.6e-21 105.9 163 44.8
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 4.6e-21 105.9 161 46.0
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 6.0e-21 105.5 159 45.9
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 6.0e-21 105.5 195 39.5
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 6.0e-21 105.5 201 39.8
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 6.0e-21 105.5 187 40.6
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 1.8e-20 104.0 162 43.2
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 2.3e-20 103.6 180 42.2
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 3.9e-20 102.8 202 38.1
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 8.7e-20 101.7 164 40.2
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 1.1e-19 101.3 173 41.6
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 1.1e-19 101.3 181 42.5
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.9e-19 100.5 147 49.0
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 3.3e-19 99.8 183 39.9
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 3.3e-19 99.8 184 39.7
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 1.3e-18 97.8 233 35.6
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 3.7e-18 96.3 204 36.3
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 2.4e-17 93.6 197 38.6
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 3.1e-17 93.2 119 50.4
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 6.9e-17 92.0 110 50.0
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 2.6e-16 90.1 132 50.8
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 4.5e-16 89.4 186 38.7
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 1.0e-15 88.2 134 43.3
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.2e-15 87.0 175 38.9
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 6.5e-15 85.5 209 35.4
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 8.5e-15 85.1 238 34.9
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.1e-14 84.7 191 37.7
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 1.9e-14 84.0 95 54.7
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 6.1e-13 79.0 126 46.0
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 1.4e-12 77.8 121 44.6
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 3.0e-12 76.6 91 52.7
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 3.0e-12 76.6 138 42.8
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 5.1e-12 75.9 100 47.0
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 4.3e-11 72.8 139 40.3
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 8.2e-10 68.6 114 43.9
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 1.1e-09 68.2 202 35.6
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 1.1e-09 68.2 76 43.4
Lsat_1_v5_gn_9_86741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.4e-09 67.8 69 53.6
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 2.6e-08 63.5 151 35.8
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 3.4e-08 63.2 78 46.2
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 2.2e-07 60.5 76 40.8
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 1.1e-06 58.2 35 74.3
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 4.2e-06 56.2 78 42.3
Actinidia25450 Actinidia chinensis HOM05D005915 ORTHO05D007239 5.5e-06 55.8 43 65.1


User provided reference genes

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