Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 1.5e-104 382.9 193 100.0
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 2.8e-79 298.9 195 75.4
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 8.8e-73 277.3 188 69.7
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.5e-72 275.8 186 68.8
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 7.4e-72 274.2 189 68.3
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 6.3e-71 271.2 192 67.2
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.4e-70 270.0 184 66.8
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 5.3e-70 268.1 190 64.2
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 6.9e-70 267.7 187 69.5
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.2e-69 266.9 185 67.0
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 2.6e-69 265.8 185 66.5
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 3.4e-69 265.4 186 66.1
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 3.4e-69 265.4 185 65.9
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 4.5e-69 265.0 186 65.1
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 4.5e-69 265.0 189 70.4
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 4.5e-69 265.0 197 64.5
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 5.9e-69 264.6 182 68.7
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 7.7e-69 264.2 186 66.7
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 7.7e-69 264.2 186 67.2
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.0e-68 263.8 186 66.7
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 1.7e-68 263.1 197 64.0
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.7e-68 263.1 184 66.3
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 2.9e-68 262.3 201 61.7
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 2.9e-68 262.3 184 65.8
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 3.8e-68 261.9 190 62.6
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 3.8e-68 261.9 179 68.2
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 5.0e-68 261.5 199 62.8
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 1.1e-67 260.4 186 66.7
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.4e-67 260.0 189 66.7
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 3.2e-67 258.8 186 65.6
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 3.2e-67 258.8 186 65.1
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 4.2e-67 258.5 189 66.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.5e-67 258.1 193 65.3
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 5.5e-67 258.1 193 65.3
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 7.2e-67 257.7 186 65.1
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.2e-66 256.9 185 64.3
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 1.6e-66 256.5 184 64.7
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.6e-66 256.5 184 64.7
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.6e-66 256.5 188 63.8
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.6e-66 256.5 182 62.6
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 2.1e-66 256.1 184 64.7
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 2.1e-66 256.1 184 64.7
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 2.7e-66 255.8 182 65.9
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 2.7e-66 255.8 192 63.5
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 1.8e-65 253.1 187 62.0
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 1.8e-65 253.1 188 63.3
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.3e-65 252.7 183 63.9
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 3.9e-65 251.9 186 64.5
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 3.9e-65 251.9 186 64.5
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.9e-65 251.9 182 63.7
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 5.1e-65 251.5 186 63.4
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 5.1e-65 251.5 182 63.7
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 5.1e-65 251.5 192 61.5
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 6.7e-65 251.1 182 64.3
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 6.7e-65 251.1 184 65.2
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 8.8e-65 250.8 182 63.2
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.1e-64 250.4 217 59.4
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.5e-64 250.0 185 64.9
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.5e-64 250.0 180 64.4
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 1.5e-64 250.0 182 63.7
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.0e-64 249.6 186 61.8
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 2.0e-64 249.6 182 61.5
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 3.3e-64 248.8 186 59.1
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 4.4e-64 248.4 186 63.4
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 4.4e-64 248.4 177 65.0
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 7.4e-64 247.7 195 61.0
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 9.7e-64 247.3 187 62.6
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 9.7e-64 247.3 184 62.0
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 9.7e-64 247.3 188 62.8
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 1.3e-63 246.9 188 63.3
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.3e-63 246.9 193 61.1
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.7e-63 246.5 186 62.4
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.8e-63 245.7 185 61.6
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.8e-63 245.7 203 61.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 3.7e-63 245.4 180 63.9
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 4.8e-63 245.0 188 61.2
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 4.8e-63 245.0 182 61.0
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 6.3e-63 244.6 180 63.3
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 6.3e-63 244.6 182 64.3
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 1.1e-62 243.8 180 63.9
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.8e-62 243.0 189 60.3
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 2.4e-62 242.7 186 60.2
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 4.1e-62 241.9 185 62.2
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 1.7e-60 236.5 184 58.7
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.7e-60 236.5 184 60.9
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 6.5e-60 234.6 170 64.1
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 8.5e-60 234.2 195 57.9
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.5e-59 233.4 190 56.3
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 1.4e-57 226.9 258 47.3
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.3e-55 220.3 183 56.3
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 9.1e-54 214.2 153 64.7
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 1.6e-53 213.4 187 55.1
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.5e-53 212.2 153 65.4
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 3.5e-53 212.2 155 66.5
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.0e-52 210.7 190 54.7
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 1.3e-52 210.3 134 71.6
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.7e-52 209.9 158 62.0
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 3.6e-50 202.2 153 65.4
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 1.5e-48 196.8 153 62.7
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 4.4e-48 195.3 153 58.2
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 5.9e-45 184.9 168 56.0
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 7.7e-45 184.5 146 58.9
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 2.9e-44 182.6 138 63.0
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 6.5e-44 181.4 153 56.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.6e-42 176.8 182 48.9
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 6.1e-42 174.9 187 49.7
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.0e-41 174.1 191 48.2
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 5.2e-41 171.8 186 49.5
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 7.2e-35 151.4 186 41.9
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 8.0e-34 147.9 130 56.9
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 7.5e-32 141.4 182 40.1
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 9.5e-27 124.4 72 75.0
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 4.4e-24 115.5 184 37.5
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 1.7e-15 87.0 56 67.9


User provided reference genes

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