Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 6.0e-164 580.9 315 100.0
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.6e-138 495.7 315 83.2
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 2.2e-137 492.7 315 82.9
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 4.1e-136 488.4 315 82.2
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 3.8e-118 428.7 334 70.1
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 6.5e-118 427.9 334 70.4
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.1e-117 427.2 331 70.4
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.5e-117 426.8 331 69.5
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 3.2e-117 425.6 320 71.9
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 5.5e-117 424.9 331 70.7
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 9.5e-117 424.1 325 70.2
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 2.8e-116 422.5 327 70.3
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 2.8e-116 422.5 322 70.8
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.8e-116 422.5 316 72.2
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.8e-116 422.5 316 72.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 1.0e-115 420.6 327 70.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 1.4e-115 420.2 323 69.7
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.4e-115 420.2 328 69.5
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.3e-115 419.5 319 69.3
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 3.0e-115 419.1 324 68.8
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 3.0e-115 419.1 322 70.2
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 3.0e-115 419.1 316 71.5
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 4.0e-115 418.7 254 82.7
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 4.0e-115 418.7 331 68.6
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 5.2e-115 418.3 249 83.5
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 6.8e-115 417.9 325 69.5
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 8.8e-115 417.5 324 68.2
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 8.8e-115 417.5 255 81.6
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.2e-114 417.2 324 69.4
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.5e-114 416.8 249 81.9
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.5e-114 416.8 329 69.3
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.6e-114 416.0 249 81.9
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 3.4e-114 415.6 256 80.5
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 5.7e-114 414.8 317 69.7
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 5.7e-114 414.8 326 68.4
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 9.8e-114 414.1 256 82.8
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 9.8e-114 414.1 330 67.6
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 9.8e-114 414.1 333 66.4
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.7e-113 413.3 314 69.7
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 1.7e-113 413.3 307 70.7
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 2.2e-113 412.9 251 82.1
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.8e-113 412.5 328 67.7
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 3.7e-113 412.1 287 72.8
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.7e-113 412.1 320 69.1
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 3.7e-113 412.1 322 68.3
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 4.9e-113 411.8 333 67.3
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 8.3e-113 411.0 248 81.0
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 8.3e-113 411.0 329 67.8
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 1.4e-112 410.2 251 80.5
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.4e-112 410.2 315 69.2
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.4e-112 410.2 322 68.0
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.8e-112 409.8 322 67.7
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 2.4e-112 409.5 324 68.2
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 3.1e-112 409.1 325 67.4
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 3.1e-112 409.1 333 65.5
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 5.4e-112 408.3 319 67.7
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 5.4e-112 408.3 341 64.5
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.2e-111 407.1 280 73.2
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.6e-111 406.8 319 68.7
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 2.0e-111 406.4 320 67.8
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 3.5e-111 405.6 270 74.8
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 4.5e-111 405.2 299 69.9
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 4.5e-111 405.2 280 72.9
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 7.8e-111 404.4 320 65.9
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 7.8e-111 404.4 251 79.3
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.0e-110 404.1 319 66.5
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 1.7e-110 403.3 287 71.1
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.7e-110 403.3 253 79.1
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.8e-110 402.1 314 65.6
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.8e-110 402.1 315 67.3
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 5.0e-110 401.7 315 66.7
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 5.0e-110 401.7 315 67.0
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 5.0e-110 401.7 314 65.9
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 1.5e-109 400.2 314 65.6
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 1.5e-109 400.2 314 65.9
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.5e-109 400.2 303 69.0
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 3.3e-109 399.1 303 69.0
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 4.3e-109 398.7 313 65.5
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 4.3e-109 398.7 313 65.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 7.3e-109 397.9 315 66.0
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 8.9e-107 391.0 287 69.7
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.4e-106 389.0 327 64.2
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 2.2e-105 386.3 319 69.6
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 2.2e-105 386.3 319 69.6
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.2e-105 386.3 239 82.0
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.1e-104 384.0 330 63.9
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.1e-104 384.0 233 82.8
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.4e-104 382.9 230 80.4
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 1.9e-101 373.2 326 62.6
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.9e-101 373.2 292 65.8
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 8.0e-100 367.9 236 75.0
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.1e-99 367.5 315 64.8
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 3.1e-99 365.9 312 64.4
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 1.5e-98 363.6 226 77.9
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 1.7e-97 360.1 320 60.6
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 8.3e-97 357.8 290 64.8
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.9e-96 356.7 326 61.7
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 2.4e-96 356.3 330 61.2
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 1.0e-94 350.9 253 69.2
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 3.9e-94 349.0 207 83.6
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 5.6e-93 345.1 251 68.1
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 9.5e-93 344.4 249 67.1
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 4.7e-92 342.0 254 66.1
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 7.5e-90 334.7 250 65.2
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 3.3e-85 319.3 274 62.0
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.4e-83 313.9 251 59.8
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 6.4e-81 305.1 245 62.0
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 2.6e-74 283.1 253 56.1
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.3e-61 239.2 236 58.1
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 4.5e-58 229.2 229 57.2
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 5.8e-58 228.8 236 55.1
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 8.4e-57 224.9 226 58.0
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.0e-49 201.4 196 60.2
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.3e-44 184.5 116 77.6
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 2.8e-36 156.8 102 68.6
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 3.9e-22 109.8 67 74.6
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.8e-14 84.3 54 70.4
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.9e-10 69.3 46 69.6
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 9.4e-08 62.0 64 56.2
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 8.8e-06 55.5 127 29.9


User provided reference genes

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