Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.2e-146 523.1 253 100.0
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 5.8e-109 397.9 260 78.5
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 5.1e-105 384.8 200 88.5
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 3.8e-100 368.6 252 73.4
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.1e-99 367.1 249 71.1
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 3.2e-99 365.5 249 72.3
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.2e-98 363.6 249 71.1
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 1.2e-98 363.6 206 80.1
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.7e-98 362.5 219 76.7
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 2.7e-98 362.5 221 75.6
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 3.5e-98 362.1 237 73.0
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 3.5e-98 362.1 245 71.4
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 4.6e-98 361.7 196 83.2
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 4.6e-98 361.7 245 71.0
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 6.0e-98 361.3 249 70.3
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 6.0e-98 361.3 194 85.1
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 7.9e-98 360.9 219 78.1
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.0e-97 360.5 237 73.0
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 1.3e-97 360.1 249 70.3
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.3e-97 360.1 203 80.3
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 1.8e-97 359.8 205 81.0
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 1.8e-97 359.8 233 74.2
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 2.3e-97 359.4 224 75.9
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 2.3e-97 359.4 205 79.5
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 3.0e-97 359.0 205 79.5
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.0e-97 359.0 196 83.2
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 3.9e-97 358.6 250 72.4
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 5.1e-97 358.2 237 73.0
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 5.1e-97 358.2 252 69.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 5.1e-97 358.2 228 72.8
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 6.7e-97 357.8 252 70.6
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 6.7e-97 357.8 207 80.2
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 6.7e-97 357.8 246 72.4
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 6.7e-97 357.8 196 83.2
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 8.7e-97 357.5 248 71.0
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 1.1e-96 357.1 253 71.1
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 1.5e-96 356.7 240 72.1
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 1.9e-96 356.3 225 76.4
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.5e-96 355.9 229 75.1
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 2.5e-96 355.9 234 72.6
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 3.3e-96 355.5 250 70.0
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 3.3e-96 355.5 200 81.5
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 7.4e-96 354.4 250 70.8
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 9.7e-96 354.0 250 69.6
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 9.7e-96 354.0 241 72.2
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 9.7e-96 354.0 249 69.5
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 2.1e-95 352.8 203 78.8
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 2.8e-95 352.4 205 79.0
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 4.8e-95 351.7 200 81.0
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 6.3e-95 351.3 203 79.3
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 6.3e-95 351.3 203 79.3
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 8.2e-95 350.9 213 76.5
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 8.2e-95 350.9 248 70.2
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 1.4e-94 350.1 242 71.1
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 6.9e-94 347.8 249 68.3
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 3.4e-93 345.5 194 80.4
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 5.9e-93 344.7 243 68.7
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 1.7e-92 343.2 205 78.0
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 2.9e-92 342.4 251 67.3
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 6.5e-92 341.3 243 70.4
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 6.5e-92 341.3 251 66.5
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.4e-91 340.1 249 67.1
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.5e-91 339.3 247 69.2
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 3.2e-91 339.0 202 76.2
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 9.3e-91 337.4 268 64.6
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 9.3e-91 337.4 202 76.7
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 1.6e-90 336.7 206 74.8
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 2.7e-90 335.9 196 78.6
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 1.0e-89 334.0 258 64.0
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 3.9e-89 332.0 234 69.7
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 6.7e-89 331.3 195 76.9
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 6.7e-89 331.3 243 67.5
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 5.3e-86 321.6 248 61.7
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 1.2e-85 320.5 193 75.6
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.0e-85 319.7 233 68.2
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 4.5e-85 318.5 244 66.4
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 1.0e-84 317.4 233 65.2
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 5.0e-84 315.1 233 69.1
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 4.6e-82 308.5 235 66.0
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 2.3e-81 306.2 260 60.8
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 3.9e-81 305.4 196 75.0
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 8.8e-81 304.3 197 70.1
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.5e-80 303.5 217 64.5
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 9.7e-80 300.8 191 72.8
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 3.7e-79 298.9 208 70.7
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 2.0e-77 293.1 199 71.4
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.0e-76 290.8 209 69.4
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 3.8e-76 288.9 226 63.7
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 2.5e-75 286.2 198 67.2
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 2.1e-74 283.1 175 70.3
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 9.7e-72 274.2 210 66.2
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 5.0e-68 261.9 191 67.5
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.1e-67 260.8 196 64.3
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 3.0e-65 252.7 233 57.5
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 1.7e-63 246.9 148 75.0
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 8.2e-63 244.6 180 66.7
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.2e-55 219.9 137 75.9
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 3.7e-55 219.2 240 51.7
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 6.3e-55 218.4 173 60.1
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 8.3e-55 218.0 236 53.8
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 5.0e-52 208.8 201 52.2
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 5.0e-52 208.8 203 53.2
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 6.3e-47 191.8 103 83.5
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 6.3e-47 191.8 200 53.0
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 6.6e-44 181.8 149 53.7
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 8.6e-44 181.4 156 60.9
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.3e-39 167.5 105 72.4
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 4.7e-26 122.5 71 80.3
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.1e-22 111.3 70 68.6
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 4.1e-22 109.4 184 37.0
Dinv25820 Davidia involucrata HOM05D007108 ORTHO05D009128 5.6e-11 72.4 48 72.9


User provided reference genes

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