Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 1.3e-69 266.2 129 100.0
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 3.1e-26 122.1 125 51.2
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 3.8e-24 115.2 91 58.2
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 1.9e-23 112.8 115 49.6
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 3.0e-21 105.5 140 44.3
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.7e-19 99.8 130 43.1
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 2.2e-19 99.4 123 43.1
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.8e-18 96.3 124 42.7
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 5.4e-18 94.7 112 44.6
Nitab4.5_0000351g0210 Nicotiana tabacum HOM05D005672 ORTHO05D003038 9.2e-18 94.0 103 47.6
unitig_21.g20351 Utricularia gibba HOM05D005672 ORTHO05D003038 9.2e-18 94.0 118 39.8
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 1.6e-17 93.2 98 45.9
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 5.9e-17 91.3 125 40.8
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 1.0e-16 90.5 122 41.0
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 1.3e-16 90.1 90 48.9
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 1.3e-16 90.1 120 39.2
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 2.3e-16 89.4 129 39.5
CAN.G395.17 Capsicum annuum HOM05D005672 ORTHO05D003038 3.0e-16 89.0 137 40.1
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 3.0e-16 89.0 112 42.0
Nitab4.5_0002327g0030 Nicotiana tabacum HOM05D005672 ORTHO05D003038 3.9e-16 88.6 133 39.1
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 8.6e-16 87.4 119 41.2
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 2.1e-14 82.8 124 40.3
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.8e-14 82.4 113 38.9
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 1.1e-13 80.5 127 40.9
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 1.8e-13 79.7 128 35.2
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.3e-13 79.3 125 38.4
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.3e-13 79.3 118 38.1
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 4.0e-13 78.6 124 36.3
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 1.2e-12 77.0 124 37.9
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.5e-12 76.6 117 39.3
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 2.6e-12 75.9 112 36.6
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 4.4e-12 75.1 120 39.2
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 4.4e-12 75.1 87 42.5
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 5.8e-12 74.7 123 35.8
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 5.8e-12 74.7 125 33.6
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 5.8e-12 74.7 124 39.5
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.7e-11 73.2 121 38.0
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.7e-11 73.2 87 40.2
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 2.2e-11 72.8 85 38.8
AL1G24160 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.9e-11 72.4 118 34.7
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 2.9e-11 72.4 117 39.3
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 2.9e-11 72.4 124 38.7
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 3.7e-11 72.0 116 38.8
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 3.7e-11 72.0 131 35.9
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 3.7e-11 72.0 87 40.2
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 3.7e-11 72.0 112 35.7
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 4.9e-11 71.6 131 41.2
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 8.3e-11 70.9 132 37.1
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 1.1e-10 70.5 131 32.8
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 1.1e-10 70.5 131 32.8
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 1.1e-10 70.5 71 46.5
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 1.4e-10 70.1 128 37.5
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.9e-10 69.7 124 35.5
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 2.4e-10 69.3 131 38.9
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 3.2e-10 68.9 110 38.2
ClCG09G002230 Citrullus lanatus HOM05D005672 ORTHO05D003038 3.2e-10 68.9 106 35.8
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 3.2e-10 68.9 88 40.9
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 4.1e-10 68.6 132 36.4
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 5.4e-10 68.2 132 36.4
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 5.4e-10 68.2 120 39.2
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 9.2e-10 67.4 125 32.0
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 1.2e-09 67.0 125 32.0
THA.LOC104823573 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.2e-09 67.0 116 32.8
DCAR_026309 Daucus carota HOM05D005672 ORTHO05D003038 1.6e-09 66.6 111 34.2
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 2.0e-09 66.2 125 36.0
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.0e-09 66.2 121 31.4
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 2.7e-09 65.9 125 36.0
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 3.5e-09 65.5 131 38.2
CsaV3_7G033060 Cucumis sativus L. HOM05D005672 ORTHO05D003038 3.5e-09 65.5 111 32.4
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 4.6e-09 65.1 122 32.8
Carub.0004s0495 Capsella rubella HOM05D007482 ORTHO05D003038 4.6e-09 65.1 137 33.6
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 4.6e-09 65.1 114 35.1
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 6.0e-09 64.7 119 35.3
Prupe.3G073200 Prunus persica HOM05D005672 ORTHO05D003038 6.0e-09 64.7 127 32.3
COL.COLO4_30353 Corchorus olitorius HOM05D005672 ORTHO05D003038 7.8e-09 64.3 74 43.2
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 7.8e-09 64.3 95 40.0
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 7.8e-09 64.3 119 35.3
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 7.8e-09 64.3 88 37.5
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 1.0e-08 63.9 109 34.9
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 1.3e-08 63.5 111 36.0
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 1.3e-08 63.5 124 29.0
Carub.0001s1236 Capsella rubella HOM05D007482 ORTHO05D003038 2.3e-08 62.8 123 33.3
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 2.3e-08 62.8 88 34.1
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 3.9e-08 62.0 90 34.4
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 5.0e-08 61.6 92 37.0
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 6.6e-08 61.2 91 36.3
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 6.6e-08 61.2 122 34.4
A05p29150 Brassica napus HOM05D007482 ORTHO05D003038 8.6e-08 60.8 125 34.4
BraA05t21798Z Brassica rapa HOM05D007482 ORTHO05D003038 8.6e-08 60.8 125 34.4
CARHR012980 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.5e-07 60.1 129 31.0
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 1.9e-07 59.7 111 29.7
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 1.9e-07 59.7 111 29.7
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 1.9e-07 59.7 111 29.7
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.9e-07 59.7 121 30.6
Sed0013481 Sechium edule HOM05D005672 ORTHO05D003038 1.9e-07 59.7 119 34.5
Thhalv10009133m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 2.5e-07 59.3 118 35.6
Peaxi162Scf00207g00940 Petunia axillaris HOM05D005672 ORTHO05D003038 2.5e-07 59.3 131 32.8
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 2.5e-07 59.3 130 35.4
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 4.3e-07 58.5 113 32.7
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 4.3e-07 58.5 121 29.8
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 5.6e-07 58.2 104 33.7
AT1G12672 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 5.6e-07 58.2 114 30.7
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 5.6e-07 58.2 130 33.1
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 9.5e-07 57.4 115 32.2
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 9.5e-07 57.4 87 34.5
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 1.2e-06 57.0 137 29.9
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.2e-06 57.0 121 28.9
Prupe.3G073100 Prunus persica HOM05D005672 ORTHO05D003038 1.2e-06 57.0 56 42.9
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 1.6e-06 56.6 139 30.9
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 2.8e-06 55.8 125 33.6
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 2.8e-06 55.8 69 36.2
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 2.8e-06 55.8 68 47.1
CSS0026145 Camellia sinensis var. sinensis HOM05D005672 ORTHO05D003038 3.6e-06 55.5 126 32.5
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 3.6e-06 55.5 86 36.0
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 4.7e-06 55.1 124 31.5
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 6.2e-06 54.7 123 31.7
BolC5t29803H Brassica oleracea HOM05D007482 ORTHO05D003038 6.2e-06 54.7 154 29.2
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 6.2e-06 54.7 121 29.8
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 8.1e-06 54.3 70 40.0
Nn8g39246 Nelumbo nucifera HOM05D005672 ORTHO05D003038 8.1e-06 54.3 69 37.7


User provided reference genes

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