Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G2093 Erigeron canadensis HOM05D001658 ORTHO05D029279 2.0e-203 712.2 354 100.0
HanXRQChr17g0546651 Helianthus annuus HOM05D001658 ORTHO05D029279 1.3e-34 151.4 370 33.8
ECA246G1398 Erigeron canadensis HOM05D001658 ORTHO05D029279 1.2e-22 111.7 393 28.8
Lsat_1_v5_gn_3_98001 Lactuca sativa HOM05D001658 ORTHO05D029279 6.0e-19 99.4 270 34.8
Lj4C117T2 Lonicera japonica HOM05D001658 ORTHO05D001406 4.3e-17 93.2 480 26.0
Oeu062484.1 Olea europaea HOM05D001658 ORTHO05D001406 9.9e-14 82.0 410 25.9
CAN.G206.207 Capsicum annuum HOM05D001328 ORTHO05D001459 1.3e-13 81.6 405 28.6
Gohir.A03G069200 Gossypium hirsutum HOM05D001658 ORTHO05D001406 1.7e-13 81.3 421 25.2
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 1.1e-12 78.6 410 27.1
Gohir.D03G095700 Gossypium hirsutum HOM05D001658 ORTHO05D001406 4.2e-12 76.6 352 27.0
Gorai.003G100400 Gossypium raimondii HOM05D001658 ORTHO05D001406 4.2e-12 76.6 352 27.0
ECA247G4074 Erigeron canadensis HOM05D001658 ORTHO05D001406 1.6e-11 74.7 434 26.5
MELO3C018946.2 Cucumis melo HOM05D001658 ORTHO05D001406 2.7e-11 73.9 379 26.6
Nitab4.5_0002881g0100 Nicotiana tabacum HOM05D001658 ORTHO05D001406 4.6e-11 73.2 308 26.0
Peaxi162Scf00013g00059 Petunia axillaris HOM05D001658 ORTHO05D001406 6.0e-11 72.8 410 25.9
BcaC01g01750 Brassica carinata HOM05D001658 ORTHO05D001406 1.0e-10 72.0 429 24.9
C03p72310 Brassica napus HOM05D001658 ORTHO05D001406 1.0e-10 72.0 429 24.9
Gorai.009G326300 Gossypium raimondii HOM05D001658 ORTHO05D001406 1.0e-10 72.0 413 25.2
Gohir.A05G306300 Gossypium hirsutum HOM05D001658 ORTHO05D001406 1.7e-10 71.2 413 25.2
HanXRQChr02g0042561 Helianthus annuus HOM05D000174 ORTHO05D001406 1.7e-10 71.2 397 24.2
TAR374G1312 Trochodendron aralioides HOM05D001658 ORTHO05D001406 1.7e-10 71.2 140 35.7
Nitab4.5_0000565g0140 Nicotiana tabacum HOM05D001658 ORTHO05D001406 2.3e-10 70.9 441 27.0
Solyc02g088670.1 Solanum lycopersicum HOM05D001658 ORTHO05D001406 2.3e-10 70.9 426 26.5
Gohir.D05G306300 Gossypium hirsutum HOM05D001658 ORTHO05D001406 3.0e-10 70.5 413 25.2
HanXRQChr04g0101431 Helianthus annuus HOM05D001658 ORTHO05D001406 3.9e-10 70.1 376 25.8
BcaC05g26407 Brassica carinata HOM05D001658 ORTHO05D001406 5.1e-10 69.7 433 25.2
Nitab4.5_0008213g0050 Nicotiana tabacum HOM05D001328 ORTHO05D001406 5.1e-10 69.7 434 24.2
BcaC06g35136 Brassica carinata HOM05D001658 ORTHO05D001406 6.6e-10 69.3 445 24.3
Psat5g211760 Pisum sativum HOM05D001658 ORTHO05D001406 8.7e-10 68.9 381 25.7
QL10p018742 Quercus lobata HOM05D001658 ORTHO05D001406 8.7e-10 68.9 258 27.9
TWI15G0313 Tripterygium wilfordii HOM05D001658 ORTHO05D001406 8.7e-10 68.9 366 24.3
Cpa.g.c33076 Carica papaya HOM05D001658 ORTHO05D001406 1.1e-09 68.6 232 30.6
HPP92_018602 Vanilla planifolia HOM05D001658 ORTHO05D001406 1.5e-09 68.2 386 25.6
FAN22G1484 Fragaria x ananassa HOM05D001658 ORTHO05D001406 1.9e-09 67.8 274 25.2
BcaB03g11999 Brassica carinata HOM05D001658 ORTHO05D001406 2.5e-09 67.4 441 24.5
Manes.14G084100 Manihot esculenta HOM05D001658 ORTHO05D001406 2.5e-09 67.4 239 28.9
Sopen02g033390 Solanum pennellii HOM05D001658 ORTHO05D001406 2.5e-09 67.4 427 26.2
Cfa007640 Carpinus fangiana HOM05D001658 ORTHO05D001406 3.3e-09 67.0 338 26.0
GSVIVG01011505001 Vitis vinifera HOM05D005220 ORTHO05D006082 3.3e-09 67.0 423 23.9
A08p27400 Brassica napus HOM05D001658 ORTHO05D001406 4.3e-09 66.6 254 28.0
C07p19460 Brassica napus HOM05D001658 ORTHO05D001406 4.3e-09 66.6 447 24.6
BolC7t42465H Brassica oleracea HOM05D001658 ORTHO05D001406 4.3e-09 66.6 447 24.6
BraA08t34681Z Brassica rapa HOM05D001658 ORTHO05D001406 4.3e-09 66.6 254 28.0
Dinv34085 Davidia involucrata HOM05D001658 ORTHO05D001406 4.3e-09 66.6 400 26.5
Lalb_Chr13g0302941 Lupinus albus HOM05D001658 ORTHO05D001406 4.3e-09 66.6 365 24.9
Sed0012205 Sechium edule HOM05D001658 ORTHO05D001406 5.6e-09 66.2 348 25.3
BraA07t29072Z Brassica rapa HOM05D001658 ORTHO05D001406 7.3e-09 65.9 445 24.7
DCAR_025415 Daucus carota HOM05D001658 ORTHO05D001406 7.3e-09 65.9 331 27.8
Phvul.L001618 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 7.3e-09 65.9 345 24.9
Cc04_g15090 Coffea canephora HOM05D001658 ORTHO05D001406 9.6e-09 65.5 231 28.6
MSTRG.9603 Avicennia marina HOM05D001658 ORTHO05D001406 1.3e-08 65.1 222 27.5
Lj5P105T25 Lonicera japonica HOM05D001658 ORTHO05D001406 1.3e-08 65.1 281 27.8
Peaxi162Scf00201g00007 Petunia axillaris HOM05D001658 ORTHO05D001406 1.3e-08 65.1 314 24.8
Prupe.3G257500 Prunus persica HOM05D001658 ORTHO05D001406 1.3e-08 65.1 455 21.3
Sed0020081 Sechium edule HOM05D001658 ORTHO05D001406 1.3e-08 65.1 350 27.7
unitig_26.g10291 Utricularia gibba HOM05D001658 ORTHO05D001406 1.6e-08 64.7 337 24.3
Sed0019820 Sechium edule HOM05D001658 ORTHO05D001406 2.1e-08 64.3 371 23.7
TAR629G3260 Trochodendron aralioides HOM05D001658 ORTHO05D001406 2.1e-08 64.3 135 34.1
Dinv16716 Davidia involucrata HOM05D001658 ORTHO05D001406 2.8e-08 63.9 442 24.4
Nitab4.5_0007754g0010 Nicotiana tabacum HOM05D000174 ORTHO05D001526 2.8e-08 63.9 291 24.7
TWI79G0022 Tripterygium wilfordii HOM05D001658 ORTHO05D001406 2.8e-08 63.9 335 28.1
VMungo1215G1529 Vigna mungo HOM05D001658 ORTHO05D001406 2.8e-08 63.9 222 29.3
Oeu038368.1 Olea europaea HOM05D001658 ORTHO05D001406 3.6e-08 63.5 264 26.1
Actinidia17578 Actinidia chinensis HOM05D001658 ORTHO05D001406 4.8e-08 63.2 394 25.6
AL1G39140 Arabidopsis lyrata HOM05D001658 ORTHO05D001406 4.8e-08 63.2 293 27.3
A07p13010 Brassica napus HOM05D001658 ORTHO05D001406 4.8e-08 63.2 445 25.2
Manes.06G087200 Manihot esculenta HOM05D001658 ORTHO05D001406 4.8e-08 63.2 221 27.6
Sopen03g034450 Solanum pennellii HOM05D001658 ORTHO05D001406 4.8e-08 63.2 364 25.5
Lalb_Chr12g0197041 Lupinus albus HOM05D001658 ORTHO05D001406 6.2e-08 62.8 139 28.1
MD14G1209000 Malus domestica HOM05D001658 ORTHO05D001406 6.2e-08 62.8 143 33.6
THA.LOC104822895 Tarenaya hassleriana HOM05D001658 ORTHO05D001406 6.2e-08 62.8 288 25.7
TPR.G2047 Trifolium pratense HOM05D001658 ORTHO05D001406 6.2e-08 62.8 222 28.4
BraA09t39498Z Brassica rapa HOM05D001658 ORTHO05D001406 8.1e-08 62.4 462 24.0
ClCG06G015790 Citrullus lanatus HOM05D001658 ORTHO05D001406 8.1e-08 62.4 131 33.6
MELO3C017210.2 Cucumis melo HOM05D001658 ORTHO05D001406 8.1e-08 62.4 131 33.6
Migut.H00643 Erythranthe guttata HOM05D001658 ORTHO05D001406 8.1e-08 62.4 413 26.4
FAN17G1222 Fragaria x ananassa HOM05D001658 ORTHO05D001406 8.1e-08 62.4 275 25.1
Lalb_Chr07g0178261 Lupinus albus HOM05D001658 ORTHO05D001406 8.1e-08 62.4 139 28.1
Solyc03g115450.1 Solanum lycopersicum HOM05D001658 ORTHO05D001406 8.1e-08 62.4 378 25.9
A08p27420 Brassica napus HOM05D001658 ORTHO05D001406 1.1e-07 62.0 426 23.7
FvH4_4g30350 Fragaria vesca HOM05D001658 ORTHO05D001406 1.1e-07 62.0 275 25.1
FAN12G4077 Fragaria x ananassa HOM05D001658 ORTHO05D001406 1.1e-07 62.0 275 25.1
CsaV3_1G002750 Cucumis sativus L. HOM05D001658 ORTHO05D001406 1.4e-07 61.6 131 33.6
Lsat_1_v5_gn_4_109861 Lactuca sativa HOM05D001658 ORTHO05D001406 1.4e-07 61.6 369 24.9
PGR119G0590 Punica granatum HOM05D001658 ORTHO05D001406 1.4e-07 61.6 344 24.4
TPR.G12271 Trifolium pratense HOM05D001658 ORTHO05D001406 1.4e-07 61.6 145 31.0
VMungo1309G2368 Vigna mungo HOM05D001658 ORTHO05D001406 1.4e-07 61.6 413 24.5
Actinidia28637 Actinidia chinensis HOM05D001658 ORTHO05D001406 1.8e-07 61.2 429 24.5
CsaV3_4G008830 Cucumis sativus L. HOM05D001658 ORTHO05D001406 1.8e-07 61.2 386 24.6
FAN07G1897 Fragaria x ananassa HOM05D001658 ORTHO05D001406 1.8e-07 61.2 274 25.5
Nn3g17399 Nelumbo nucifera HOM05D001658 ORTHO05D001406 1.8e-07 61.2 145 31.0
Nn4g23377 Nelumbo nucifera HOM05D001658 ORTHO05D001406 1.8e-07 61.2 135 32.6
Oeu016222.2 Olea europaea HOM05D001658 ORTHO05D001406 1.8e-07 61.2 363 25.3
BcaC01g01747 Brassica carinata HOM05D001658 ORTHO05D001406 2.4e-07 60.8 250 28.0
C03p72350 Brassica napus HOM05D000263 ORTHO05D014482 2.4e-07 60.8 250 28.0
BolC3t19529H Brassica oleracea HOM05D000263 ORTHO05D014482 2.4e-07 60.8 250 28.0
BolC5t31177H Brassica oleracea HOM05D001658 ORTHO05D001406 2.4e-07 60.8 460 23.5
CSS0007053 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 2.4e-07 60.8 390 25.4
Migut.L01205 Erythranthe guttata HOM05D001658 ORTHO05D001406 2.4e-07 60.8 444 25.0
Oeu010242.1 Olea europaea HOM05D001658 ORTHO05D001406 2.4e-07 60.8 155 32.3
Potri.008G094500 Populus trichocarpa HOM05D001658 ORTHO05D001406 2.4e-07 60.8 221 27.1
CSS0031827 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 3.1e-07 60.5 115 34.8
SGA_v2.0_scaffold36G14444 Striga asiatica HOM05D001658 ORTHO05D001406 3.1e-07 60.5 391 25.8
Actinidia26246 Actinidia chinensis HOM05D001658 ORTHO05D001406 4.0e-07 60.1 228 27.6
ClCG07G007300 Citrullus lanatus HOM05D001658 ORTHO05D001406 4.0e-07 60.1 380 25.0
Duzib068G0063 Durio zibethinus HOM05D001658 ORTHO05D001406 4.0e-07 60.1 388 23.5
Manes.01G029200 Manihot esculenta HOM05D001658 ORTHO05D001406 4.0e-07 60.1 465 22.4
Peaxi162Scf00106g00091 Petunia axillaris HOM05D001658 ORTHO05D001406 4.0e-07 60.1 371 23.7
TWI31G0488 Tripterygium wilfordii HOM05D001658 ORTHO05D001406 4.0e-07 60.1 268 28.0
DCAR_011049 Daucus carota HOM05D001658 ORTHO05D001406 5.3e-07 59.7 418 23.9
Glyma.07G226800 Glycine max HOM05D001658 ORTHO05D001406 5.3e-07 59.7 244 30.7
Phvul.002G168500 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 5.3e-07 59.7 227 27.8
Sabra08G0071000 Salix brachista HOM05D001658 ORTHO05D001406 5.3e-07 59.7 302 24.2
TAR622G0347 Trochodendron aralioides HOM05D001658 ORTHO05D001406 5.3e-07 59.7 163 28.2
CARHR025360 Cardamine hirsuta HOM05D001658 ORTHO05D001406 6.9e-07 59.3 454 23.8
CiPaw.06G091100 Carya illinoinensis HOM05D001658 ORTHO05D001406 6.9e-07 59.3 220 29.5
CiPaw.05G126700 Carya illinoinensis HOM05D001658 ORTHO05D001406 9.0e-07 58.9 366 26.5
Haze_07685 Corylus avellana HOM05D001658 ORTHO05D001406 9.0e-07 58.9 149 32.2
Duzib248G0531 Durio zibethinus HOM05D001658 ORTHO05D001406 9.0e-07 58.9 324 25.0
Glyma.20G026600 Glycine max HOM05D001658 ORTHO05D001406 9.0e-07 58.9 285 27.7
Phvul.002G082200 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 9.0e-07 58.9 393 24.4
SGA_v2.0_scaffold4G02403 Striga asiatica HOM05D001658 ORTHO05D001406 9.0e-07 58.9 412 27.2
THA.LOC104805032 Tarenaya hassleriana HOM05D001658 ORTHO05D001406 9.0e-07 58.9 258 24.0
Thecc.03G097400 Theobroma cacao HOM05D001658 ORTHO05D001406 9.0e-07 58.9 359 25.6
ECA232G2612 Erigeron canadensis HOM05D001658 ORTHO05D001406 1.2e-06 58.5 376 24.5
Lalb_Chr17g0341121 Lupinus albus HOM05D001658 ORTHO05D001406 1.2e-06 58.5 145 31.0
Phvul.009G190665 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 1.2e-06 58.5 229 28.8
TAR371G0514 Trochodendron aralioides HOM05D001658 ORTHO05D001406 1.2e-06 58.5 220 26.8
Atru.chr11.1665 Acer truncatum HOM05D001658 ORTHO05D001406 1.5e-06 58.2 250 26.4
BraA09t36583Z Brassica rapa HOM05D000174 ORTHO05D000630 1.5e-06 58.2 145 33.1
Oeu004567.2 Olea europaea HOM05D001658 ORTHO05D001406 1.5e-06 58.2 336 25.6
RcHm_v2.0_Chr4g0438641 Rosa chinensis HOM05D001658 ORTHO05D001406 1.5e-06 58.2 285 26.3
Aa31LG7G8500 Aethionema arabicum HOM05D001658 ORTHO05D001406 2.0e-06 57.8 152 27.6
CSS0006199 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 2.0e-06 57.8 407 24.1
FAN27G0184 Fragaria x ananassa HOM05D000174 ORTHO05D001526 2.0e-06 57.8 225 25.8
HPP92_012301 Vanilla planifolia HOM05D001658 ORTHO05D001406 2.0e-06 57.8 358 23.2
Thhalv10009600m.g Eutrema salsugineum HOM05D001658 ORTHO05D001406 2.6e-06 57.4 260 26.9
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 2.6e-06 57.4 337 27.3
Prupe.1G283600 Prunus persica HOM05D001658 ORTHO05D001406 2.6e-06 57.4 221 30.3
CAN.G479.29 Capsicum annuum HOM05D001658 ORTHO05D001406 3.4e-06 57.0 373 24.1
Ca_13810_v3 Cicer arietinum L. HOM05D001658 ORTHO05D001406 3.4e-06 57.0 320 26.6
Ca_21788_v3 Cicer arietinum L. HOM05D001658 ORTHO05D001406 3.4e-06 57.0 239 27.6
FvH4_2g16630 Fragaria vesca HOM05D000174 ORTHO05D001526 3.4e-06 57.0 230 26.1
Gohir.A13G080800 Gossypium hirsutum HOM05D001658 ORTHO05D001406 3.4e-06 57.0 454 24.0
Lalb_Chr05g0220031 Lupinus albus HOM05D001658 ORTHO05D001406 3.4e-06 57.0 413 23.7
Nitab4.5_0004511g0050 Nicotiana tabacum HOM05D001658 ORTHO05D001406 3.4e-06 57.0 298 24.5
A09p40000 Brassica napus HOM05D001658 ORTHO05D001406 4.5e-06 56.6 458 22.9
Cfa008895 Carpinus fangiana HOM05D001658 ORTHO05D001406 4.5e-06 56.6 314 25.5
ClCG04G011920 Citrullus lanatus HOM05D001658 ORTHO05D001406 4.5e-06 56.6 185 27.6
COL.COLO4_17932 Corchorus olitorius HOM05D000174 ORTHO05D001526 4.5e-06 56.6 237 26.6
FAN24G2331 Fragaria x ananassa HOM05D000174 ORTHO05D001526 4.5e-06 56.6 223 27.4
Rhsim08G0074300 Rhododendron simsii HOM05D001658 ORTHO05D001406 4.5e-06 56.6 198 31.8
PGSC0003DMG400024550 Solanum tuberosum HOM05D001658 ORTHO05D001406 4.5e-06 56.6 337 23.1
A09p09300 Brassica napus HOM05D000174 ORTHO05D000630 5.8e-06 56.2 145 32.4
C05p24440 Brassica napus HOM05D001658 ORTHO05D001406 5.8e-06 56.2 466 22.1
Dinv38789 Davidia involucrata HOM05D000773 ORTHO05D000588 5.8e-06 56.2 181 27.1
C09p10890 Brassica napus HOM05D000174 ORTHO05D000630 7.6e-06 55.8 144 33.3
Thhalv10007938m.g Eutrema salsugineum HOM05D001658 ORTHO05D001406 7.6e-06 55.8 426 23.5
Hma1.2p1_0032F.1_g018690 Hydrangea macrophylla HOM05D000174 ORTHO05D001526 7.6e-06 55.8 237 25.7
Lalb_Chr10g0098681 Lupinus albus HOM05D001658 ORTHO05D001406 7.6e-06 55.8 183 27.9
Lalb_Chr16g0385601 Lupinus albus HOM05D001658 ORTHO05D001406 7.6e-06 55.8 222 27.9
Medtr4g109340 Medicago truncatula HOM05D001658 ORTHO05D001406 7.6e-06 55.8 418 23.9
unitig_747.g21187 Utricularia gibba HOM05D001658 ORTHO05D001406 7.6e-06 55.8 384 24.2
ATR0064G079 Amborella trichopoda HOM05D001658 ORTHO05D001406 9.9e-06 55.5 389 24.4
Cc10_g04030 Coffea canephora HOM05D000174 ORTHO05D001526 9.9e-06 55.5 262 24.8
Duzib205G0521 Durio zibethinus HOM05D001658 ORTHO05D001406 9.9e-06 55.5 338 26.0
Peaxi162Scf00263g00147 Petunia axillaris HOM05D000174 ORTHO05D001526 9.9e-06 55.5 270 23.7
Sed0006849 Sechium edule HOM05D001658 ORTHO05D001406 9.9e-06 55.5 215 27.9


User provided reference genes

Program Settings