Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1991 Erigeron canadensis HOM05D024224 ORTHO05D003264 5.4e-71 271.2 166 100.0
HanXRQChr11g0322101 Helianthus annuus HOM05D024224 ORTHO05D003264 4.6e-38 161.8 169 65.1
Lsat_1_v5_gn_0_1200 Lactuca sativa HOM05D024224 ORTHO05D003264 1.0e-21 107.5 166 57.8
HanXRQChr06g0185341 Helianthus annuus HOM05D024224 ORTHO05D003264 1.5e-20 103.6 169 58.6
Lsat_1_v5_gn_2_7721 Lactuca sativa HOM05D024224 ORTHO05D003264 1.7e-16 90.1 171 48.5
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.4e-09 65.9 79 53.2
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 4.5e-09 65.5 207 32.9
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 4.5e-09 65.5 68 58.8
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 5.9e-09 65.1 79 51.9
MELO3C013748.2 Cucumis melo HOM05D003331 ORTHO05D003264 5.9e-09 65.1 68 57.4
CsaV3_3G000600 Cucumis sativus L. HOM05D003331 ORTHO05D003264 5.9e-09 65.1 68 57.4
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 7.7e-09 64.7 71 54.9
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 1.3e-08 63.9 80 50.0
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.7e-08 63.5 79 50.6
PGR031G1921 Punica granatum HOM05D003331 ORTHO05D003264 1.7e-08 63.5 148 35.8
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 2.9e-08 62.8 79 49.4
Lsat_1_v5_gn_4_145080 Lactuca sativa HOM05D003331 ORTHO05D003264 3.8e-08 62.4 83 53.0
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 3.8e-08 62.4 79 49.4
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 3.8e-08 62.4 82 46.3
HPP92_022194 Vanilla planifolia HOM05D003331 ORTHO05D003264 5.0e-08 62.0 68 57.4
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 6.5e-08 61.6 79 49.4
Eucgr.F01674 Eucalyptus grandis HOM05D003331 ORTHO05D003264 6.5e-08 61.6 76 51.3
Glyma.01G163500 Glycine max HOM05D003331 ORTHO05D003264 6.5e-08 61.6 184 34.2
HanXRQChr15g0487141 Helianthus annuus HOM05D003331 ORTHO05D003264 6.5e-08 61.6 70 57.1
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 6.5e-08 61.6 79 50.6
HPP92_022184 Vanilla planifolia HOM05D003331 ORTHO05D003264 6.5e-08 61.6 68 57.4
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 8.5e-08 61.2 99 43.4
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 8.5e-08 61.2 70 55.7
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 8.5e-08 61.2 79 49.4
HanXRQChr05g0133741 Helianthus annuus HOM05D003331 ORTHO05D003264 8.5e-08 61.2 80 51.2
PGR083G0975 Punica granatum HOM05D003331 ORTHO05D003264 8.5e-08 61.2 76 51.3
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.1e-07 60.8 72 52.8
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 1.1e-07 60.8 80 50.0
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.4e-07 60.5 70 54.3
Solyc02g083520.2 Solanum lycopersicum HOM05D003331 ORTHO05D003264 1.4e-07 60.5 81 50.6
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 1.4e-07 60.5 81 50.6
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.9e-07 60.1 70 54.3
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 1.9e-07 60.1 72 52.8
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 2.5e-07 59.7 83 47.0
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 2.5e-07 59.7 106 42.5
Lalb_Chr09g0321511 Lupinus albus HOM05D003331 ORTHO05D003264 3.2e-07 59.3 86 47.7
PSO541G2637 Papaver somniferum HOM05D003331 ORTHO05D003264 3.2e-07 59.3 71 53.5
PSO675G4415 Papaver somniferum HOM05D003331 ORTHO05D003264 3.2e-07 59.3 71 53.5
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 4.2e-07 58.9 69 56.5
Sc02g0008740 Simmondsia chinensis HOM05D003331 ORTHO05D003264 4.2e-07 58.9 70 54.3
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 5.5e-07 58.5 87 46.0
ECA232G3395 Erigeron canadensis HOM05D003331 ORTHO05D003264 5.5e-07 58.5 80 50.0
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 5.5e-07 58.5 78 48.7
Actinidia15450 Actinidia chinensis HOM05D003331 ORTHO05D003264 9.4e-07 57.8 70 54.3
Glyma.11G080000 Glycine max HOM05D003331 ORTHO05D003264 9.4e-07 57.8 76 50.0
Oeu012566.1 Olea europaea HOM05D003331 ORTHO05D003264 9.4e-07 57.8 68 57.4
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 9.4e-07 57.8 70 52.9
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 9.4e-07 57.8 91 44.0
Gohir.D05G258000 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.2e-06 57.4 69 53.6
unitig_26.g9887 Utricularia gibba HOM05D003331 ORTHO05D003264 1.2e-06 57.4 97 47.4
Sabra02G0014700 Salix brachista HOM05D003331 ORTHO05D003264 2.1e-06 56.6 70 52.9
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 2.1e-06 56.6 85 44.7
Potri.002G018400 Populus trichocarpa HOM05D003331 ORTHO05D003264 2.7e-06 56.2 70 52.9
EL10Ac6g15165 Beta vulgaris HOM05D003331 ORTHO05D003264 3.6e-06 55.8 48 64.6
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 3.6e-06 55.8 79 45.6
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 3.6e-06 55.8 69 53.6
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 4.7e-06 55.5 70 47.1
Hund05165 Selenicereus undatus HOM05D003331 ORTHO05D003264 4.7e-06 55.5 84 47.6
Gorai.009G269300 Gossypium raimondii HOM05D003331 ORTHO05D003264 6.1e-06 55.1 69 52.2
SGA_v2.0_scaffold137G35070 Striga asiatica HOM05D003331 ORTHO05D003264 6.1e-06 55.1 85 48.2


User provided reference genes

Program Settings