Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 1.9e-145 519.2 273 100.0
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 3.7e-133 478.4 271 92.3
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 4.0e-132 474.9 272 91.5
Lj1A1105T22 Lonicera japonica HOM05D003833 ORTHO05D004209 4.2e-121 438.3 272 84.9
Dinv08489 Davidia involucrata HOM05D003833 ORTHO05D004209 7.9e-120 434.1 272 83.1
Lj2A394G34 Lonicera japonica HOM05D003833 ORTHO05D004209 3.0e-119 432.2 275 83.3
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 2.5e-118 429.1 273 82.4
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 9.7e-118 427.2 272 80.5
FAN05G1327 Fragaria x ananassa HOM05D003833 ORTHO05D004209 4.8e-117 424.9 274 81.0
FAN05G4135 Fragaria x ananassa HOM05D003833 ORTHO05D004209 4.8e-117 424.9 274 81.0
FvH4_6g25150 Fragaria vesca HOM05D003833 ORTHO05D004209 1.4e-116 423.3 274 81.0
Solyc02g068640.3 Solanum lycopersicum HOM05D003833 ORTHO05D004209 1.8e-116 422.9 272 81.2
Sopen02g017810 Solanum pennellii HOM05D003833 ORTHO05D004209 1.8e-116 422.9 272 81.2
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 4.1e-116 421.8 272 80.5
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 4.1e-116 421.8 272 80.9
PGSC0003DMG400010441 Solanum tuberosum HOM05D003833 ORTHO05D004209 4.1e-116 421.8 269 81.8
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 6.9e-116 421.0 274 79.9
Haze_19732 Corylus avellana HOM05D003833 ORTHO05D004209 9.1e-116 420.6 272 79.8
FAN02G2058 Fragaria x ananassa HOM05D003833 ORTHO05D004209 1.2e-115 420.2 274 80.3
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 1.2e-115 420.2 273 80.2
Migut.K00123 Erythranthe guttata HOM05D003833 ORTHO05D004209 1.5e-115 419.9 272 80.9
MSTRG.10798 Avicennia marina HOM05D003833 ORTHO05D004209 2.6e-115 419.1 271 81.5
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 2.6e-115 419.1 276 80.1
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 3.4e-115 418.7 274 80.3
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 5.9e-115 417.9 272 78.7
Actinidia39173 Actinidia chinensis HOM05D003833 ORTHO05D004209 1.0e-114 417.2 268 81.3
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 1.7e-114 416.4 275 78.9
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 1.7e-114 416.4 269 81.0
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 1.7e-114 416.4 272 79.0
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 3.8e-114 415.2 273 79.9
Ciclev10005607m.g Citrus clementina HOM05D003833 ORTHO05D004209 5.0e-114 414.8 272 81.2
CANSAT64G1401 Cannabis sativa HOM05D003833 ORTHO05D004209 6.5e-114 414.5 269 81.4
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 6.5e-114 414.5 289 78.2
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 1.1e-113 413.7 268 79.1
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 1.4e-113 413.3 275 79.3
SGA_v2.0_scaffold94G28522 Striga asiatica HOM05D003833 ORTHO05D004209 1.4e-113 413.3 269 81.0
FAN14G1808 Fragaria x ananassa HOM05D003833 ORTHO05D004209 2.5e-113 412.5 282 78.4
Peaxi162Scf00149g00116 Petunia axillaris HOM05D003833 ORTHO05D004209 3.2e-113 412.1 283 77.4
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 3.2e-113 412.1 274 78.5
MD14G1084400 Malus domestica HOM05D003833 ORTHO05D004209 4.2e-113 411.8 274 78.8
Cfa016709 Carpinus fangiana HOM05D003833 ORTHO05D004209 5.5e-113 411.4 272 77.6
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 7.2e-113 411.0 275 80.0
AUR62030362 Chenopodium quinoa HOM05D003833 ORTHO05D004209 7.2e-113 411.0 273 79.1
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 1.2e-112 410.2 275 80.0
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 2.1e-112 409.5 272 78.3
Aqoxy2G03781 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 7.9e-112 407.5 275 77.8
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 7.9e-112 407.5 275 77.8
PGR042G2932 Punica granatum HOM05D003833 ORTHO05D004209 1.0e-111 407.1 273 79.5
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 1.0e-111 407.1 274 79.6
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 1.4e-111 406.8 272 78.7
Aqoxy2G00325 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 2.3e-111 406.0 275 77.1
TWI53G1459 Tripterygium wilfordii HOM05D003833 ORTHO05D004209 3.0e-111 405.6 270 80.7
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 5.1e-111 404.8 269 79.2
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 6.7e-111 404.4 270 79.3
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 8.8e-111 404.1 270 80.0
EL10Ac3g07192 Beta vulgaris HOM05D003833 ORTHO05D004209 8.8e-111 404.1 273 78.0
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 8.8e-111 404.1 269 79.2
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 8.8e-111 404.1 270 78.1
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 1.1e-110 403.7 270 79.3
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 1.5e-110 403.3 275 77.1
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 2.6e-110 402.5 269 78.1
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 4.4e-110 401.7 275 76.7
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 5.7e-110 401.4 270 77.8
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 7.4e-110 401.0 272 77.6
Ah.04g151120 Amaranthus hybridus HOM05D003833 ORTHO05D004209 9.7e-110 400.6 274 76.6
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 9.7e-110 400.6 272 77.2
Psat3g078000 Pisum sativum HOM05D003833 ORTHO05D004209 1.3e-109 400.2 269 77.3
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 1.7e-109 399.8 270 77.8
COL.COLO4_33945 Corchorus olitorius HOM05D003833 ORTHO05D004209 4.8e-109 398.3 274 77.7
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 6.3e-109 397.9 270 78.1
Hund24632 Selenicereus undatus HOM05D003833 ORTHO05D004209 8.2e-109 397.5 273 75.5
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 1.1e-108 397.1 270 77.4
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 1.8e-108 396.4 270 76.3
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 3.1e-108 395.6 272 76.8
Carub.0006s1298 Capsella rubella HOM05D003833 ORTHO05D004209 4.1e-108 395.2 273 78.0
PSO210G1377 Papaver somniferum HOM05D003833 ORTHO05D004209 1.5e-107 393.3 271 74.9
Nitab4.5_0003379g0050 Nicotiana tabacum HOM05D003833 ORTHO05D004209 7.7e-107 391.0 335 66.6
PSO832G0079 Papaver somniferum HOM05D003833 ORTHO05D004209 7.7e-107 391.0 271 74.5
Sed0027268 Sechium edule HOM05D003833 ORTHO05D004209 7.7e-107 391.0 270 77.4
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 1.3e-106 390.2 273 77.3
Sp6g29240 Schrenkiella parvula HOM05D003833 ORTHO05D004209 2.2e-106 389.4 273 77.3
AT5G14800 Arabidopsis thaliana HOM05D003833 ORTHO05D004209 2.9e-106 389.0 273 77.3
AUR62040845 Chenopodium quinoa HOM05D003833 ORTHO05D004209 1.1e-105 387.1 273 76.9
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 1.4e-105 386.7 300 72.0
CARHR198510 Cardamine hirsuta HOM05D003833 ORTHO05D004209 1.4e-105 386.7 273 76.2
Thhalv10014353m.g Eutrema salsugineum HOM05D003833 ORTHO05D004209 1.4e-105 386.7 273 76.6
A10p23880 Brassica napus HOM05D003833 ORTHO05D004209 2.5e-105 386.0 273 76.2
BcaB08g36945 Brassica carinata HOM05D003833 ORTHO05D004209 3.2e-105 385.6 273 76.2
A03p06820 Brassica napus HOM05D003833 ORTHO05D004209 3.2e-105 385.6 272 76.5
BolC9t59073H Brassica oleracea HOM05D003833 ORTHO05D004209 3.2e-105 385.6 273 75.8
BcaC04g19007 Brassica carinata HOM05D003833 ORTHO05D004209 7.2e-105 384.4 273 75.8
C09p62360 Brassica napus HOM05D003833 ORTHO05D004209 7.2e-105 384.4 273 75.5
BraA10t44452Z Brassica rapa HOM05D003833 ORTHO05D004209 2.1e-104 382.9 273 75.8
THA.LOC104816595 Tarenaya hassleriana HOM05D003833 ORTHO05D004209 2.7e-104 382.5 275 74.5
PSO782G0909 Papaver somniferum HOM05D003833 ORTHO05D004209 8.0e-104 380.9 274 72.3
BcaB01g05096 Brassica carinata HOM05D003833 ORTHO05D004209 1.4e-103 380.2 272 76.5
C03p07820 Brassica napus HOM05D003833 ORTHO05D004209 1.4e-103 380.2 272 76.5
BolC3t13281H Brassica oleracea HOM05D003833 ORTHO05D004209 1.4e-103 380.2 272 76.5
Nitab4.5_0006282g0020 Nicotiana tabacum HOM05D003833 ORTHO05D004209 2.3e-103 379.4 322 67.4
BraA03t10007Z Brassica rapa HOM05D003833 ORTHO05D004209 3.0e-103 379.0 276 75.4
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 6.7e-103 377.9 369 58.8
Ah.13g077020 Amaranthus hybridus HOM05D003833 ORTHO05D004209 2.6e-102 375.9 287 70.0
Nn7g36480 Nelumbo nucifera HOM05D003833 ORTHO05D004209 4.1e-100 368.6 275 71.6
Aa31LG11G14650 Aethionema arabicum HOM05D003833 ORTHO05D004209 5.9e-99 364.8 315 66.0
Cc06_g18620 Coffea canephora HOM05D003833 ORTHO05D004209 7.7e-99 364.4 256 74.2
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 7.7e-99 364.4 254 77.2
MBI13_g29520_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.0e-98 364.0 265 72.1
CDE09G0749 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 1.6e-96 356.7 275 68.4
SHI05043 Sapria himalayana HOM05D003833 ORTHO05D004209 4.7e-96 355.1 268 70.1
ATR0721G010 Amborella trichopoda HOM05D003833 ORTHO05D004209 1.0e-95 354.0 274 68.6
CDE02G3693 Ceratophyllum demersum HOM05D003833 ORTHO05D004209 1.0e-95 354.0 275 68.4
HPP92_001015 Vanilla planifolia HOM05D003833 ORTHO05D004209 4.8e-93 345.1 265 66.4
Os01g0948400 Oryza sativa ssp. japonica HOM05D003833 ORTHO05D004209 4.1e-92 342.0 279 65.6
RhsimUnG0217200 Rhododendron simsii HOM05D003833 ORTHO05D004209 2.1e-88 329.7 488 44.5
Rhsim03G0034800 Rhododendron simsii HOM05D003833 ORTHO05D004209 6.1e-88 328.2 488 44.3
Prupe.7G045400 Prunus persica HOM05D003833 ORTHO05D004209 9.8e-86 320.9 270 60.0
SEGI_35199 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 2.2e-85 319.7 264 64.4
MD12G1091800 Malus domestica HOM05D003833 ORTHO05D004209 1.1e-84 317.4 270 60.4
Eucgr.K01625 Eucalyptus grandis HOM05D003833 ORTHO05D004209 7.0e-84 314.7 214 79.4
Zm00001eb141220 Zea mays HOM05D003833 ORTHO05D004209 5.0e-82 308.5 270 61.5
BolC3t20513H Brassica oleracea HOM05D003833 ORTHO05D004209 2.2e-77 293.1 249 64.3
Mapoly0029s0092 Marchantia polymorpha HOM05D003833 ORTHO05D004209 1.1e-76 290.8 269 60.2
SMO337G0103 Selaginella moellendorffii HOM05D003833 ORTHO05D004209 4.1e-76 288.9 262 58.8
AagrBONN_evm.TU.Sc2ySwM_368.156 Anthoceros agrestis HOM05D003833 ORTHO05D004209 2.7e-75 286.2 271 56.8
AagrBONN_evm.TU.Sc2ySwM_368.1806 Anthoceros agrestis HOM05D003833 ORTHO05D004209 7.8e-75 284.6 272 55.9
BolC4t23181H Brassica oleracea HOM05D003833 ORTHO05D004209 1.3e-74 283.9 250 63.6
Pp3c10_15650 Physcomitrium patens HOM05D003833 ORTHO05D004209 1.9e-73 280.0 275 54.9
C03p82400 Brassica napus HOM05D003833 ORTHO05D004209 5.6e-73 278.5 276 58.0
C03p82420 Brassica napus HOM05D003833 ORTHO05D004209 7.3e-73 278.1 277 57.4
BcaC02g10661 Brassica carinata HOM05D003833 ORTHO05D004209 9.5e-73 277.7 253 62.8
BolC4t24169H Brassica oleracea HOM05D003833 ORTHO05D004209 1.2e-72 277.3 254 63.0
Dinv03868 Davidia involucrata HOM05D003833 ORTHO05D004209 8.0e-72 274.6 164 84.1
CBR_g16006 Chara braunii HOM05D003833 ORTHO05D004209 8.9e-71 271.2 277 52.7
BcaC06g33558 Brassica carinata HOM05D003833 ORTHO05D004209 1.2e-70 270.8 276 57.2
BcaC02g11392 Brassica carinata HOM05D003833 ORTHO05D004209 3.4e-70 269.2 277 57.0
C04p16080 Brassica napus HOM05D003833 ORTHO05D004209 3.4e-70 269.2 277 57.4
Cre03.g154550 Chlamydomonas reinhardtii HOM05D003833 ORTHO05D004209 6.0e-67 258.5 269 53.2
Duzib056G0002 Durio zibethinus HOM05D003833 ORTHO05D004209 8.6e-66 254.6 257 59.5
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.9e-65 253.4 283 58.3
BolC6t37672H Brassica oleracea HOM05D003833 ORTHO05D004209 2.6e-62 243.0 223 61.9
C06p25140 Brassica napus HOM05D003833 ORTHO05D004209 7.5e-62 241.5 275 54.9
RcHm_v2.0_Chr2g0125021 Rosa chinensis HOM05D003833 ORTHO05D004209 1.4e-60 237.3 147 80.3
C04p26360 Brassica napus HOM05D003833 ORTHO05D004209 2.1e-59 233.4 251 55.8
MCO05G631 Micromonas commoda HOM05D003833 ORTHO05D004209 1.1e-57 227.6 265 50.6
Rhsim13G0081800 Rhododendron simsii HOM05D003833 ORTHO05D004209 1.9e-57 226.9 271 52.0
BolC3t20511H Brassica oleracea HOM05D003833 ORTHO05D004209 2.1e-51 206.8 131 80.2
BcaC02g10122 Brassica carinata HOM05D003833 ORTHO05D004209 4.6e-51 205.7 245 49.8
BcaC08g44899 Brassica carinata HOM05D003833 ORTHO05D004209 7.8e-51 204.9 268 49.6
FAN06G3481 Fragaria x ananassa HOM05D003833 ORTHO05D004209 3.4e-46 189.5 164 65.2
Eucgr.K01616 Eucalyptus grandis HOM05D003833 ORTHO05D004209 9.9e-46 188.0 136 72.1
SEGI_40635 Sequoiadendron giganteum HOM05D003833 ORTHO05D004209 5.4e-44 182.2 137 69.3
MBI03_g45406_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 1.0e-42 177.9 148 64.9
MD12G1094100 Malus domestica HOM05D003833 ORTHO05D004209 8.7e-42 174.9 138 63.0
PRCOL_00005946 Prasinoderma coloniale HOM05D003833 ORTHO05D004209 8.1e-40 168.3 228 46.5
MCO04G012 Micromonas commoda HOM05D003833 ORTHO05D004209 1.8e-39 167.2 420 34.3
TAR623G0480 Trochodendron aralioides HOM05D003833 ORTHO05D004209 4.0e-39 166.0 96 87.5
MBI03_g17131_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 3.8e-37 159.5 130 64.6
MBI09_g02151_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 4.2e-36 156.0 120 71.7
Nn1g08168 Nelumbo nucifera HOM05D003833 ORTHO05D004209 5.3e-31 139.0 117 62.4
Haze_26946 Corylus avellana HOM05D003833 ORTHO05D004209 9.9e-30 134.8 257 35.4
Medtr1046s0010 Medicago truncatula HOM05D003833 ORTHO05D004209 7.1e-28 128.6 259 32.8
FvH4_7g06311 Fragaria vesca HOM05D003833 ORTHO05D004209 8.7e-26 121.7 73 89.0
Haze_27356 Corylus avellana HOM05D003833 ORTHO05D004209 2.5e-25 120.2 288 30.2
RcHm_v2.0_Chr2g0125031 Rosa chinensis HOM05D003833 ORTHO05D004209 2.1e-24 117.1 140 52.1
BcaNung06051 Brassica carinata HOM05D003833 ORTHO05D004209 4.2e-20 102.8 111 53.2
Aqoxy3G03819 Aquilegia oxysepala HOM05D003833 ORTHO05D004209 3.5e-19 99.8 150 43.3
CBR_g37250 Chara braunii HOM05D003833 ORTHO05D004209 8.7e-18 95.1 69 66.7
BcaC02g08088 Brassica carinata HOM05D003833 ORTHO05D004209 7.4e-17 92.0 52 90.4
C04p17110 Brassica napus HOM05D003833 ORTHO05D004209 9.6e-17 91.7 52 88.5
BolC4t23262H Brassica oleracea HOM05D003833 ORTHO05D004209 9.6e-17 91.7 52 88.5
Oeu050503.1 Olea europaea HOM05D003833 ORTHO05D004209 1.6e-16 90.9 70 67.1
BolC8t47752H Brassica oleracea HOM05D003833 ORTHO05D004209 2.1e-16 90.5 52 88.5
MBI10_g20272_MAGBIO Magnolia biondii HOM05D003833 ORTHO05D004209 2.8e-16 90.1 59 78.0
BcaC02g11310 Brassica carinata HOM05D003833 ORTHO05D004209 4.8e-16 89.4 52 88.5
FvH4_7g06312 Fragaria vesca HOM05D003833 ORTHO05D004209 1.1e-15 88.2 53 77.4
C08p09060 Brassica napus HOM05D003833 ORTHO05D004209 4.1e-15 86.3 50 86.0
MD12G1091600 Malus domestica HOM05D003833 ORTHO05D004209 1.0e-13 81.6 65 67.7
BolC4t24812H Brassica oleracea HOM05D003833 ORTHO05D004209 2.5e-12 77.0 85 50.6
SGA_v2.0_scaffold44G16671 Striga asiatica HOM05D003833 ORTHO05D004209 9.3e-12 75.1 65 61.5
Gohir.D13G165733 Gossypium hirsutum HOM05D002585 ORTHO05D002917 7.9e-11 72.0 66 59.1
Gohir.D06G163101 Gossypium hirsutum HOM05D002585 ORTHO05D002917 1.3e-10 71.2 66 59.1
Gorai.011G171800 Gossypium raimondii HOM05D002585 ORTHO05D002917 1.3e-10 71.2 66 59.1
Gorai.008G052500 Gossypium raimondii HOM05D002585 ORTHO05D002917 2.5e-09 67.0 63 58.7
HanXRQChr08g0208641 Helianthus annuus HOM05D003833 ORTHO05D004209 8.2e-08 62.0 103 45.6
CAN.G102.1 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-07 60.1 52 59.6
SalBow6G3161 Salvia bowleyana HOM05D021775 ORTHO05D004209 4.1e-07 59.7 40 75.0


User provided reference genes

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