Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 2.4e-159 565.5 285 100.0
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.4e-127 459.1 277 82.7
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 4.0e-122 441.8 271 81.2
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.2e-104 382.9 255 74.5
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 7.0e-103 377.9 260 72.3
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 7.0e-103 377.9 260 72.3
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 1.6e-102 376.7 276 68.8
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 3.5e-102 375.6 267 71.2
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 7.8e-102 374.4 264 72.7
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 1.3e-101 373.6 267 71.5
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.7e-101 373.2 267 70.0
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 6.6e-101 371.3 264 71.6
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 4.3e-100 368.6 268 70.9
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 4.3e-100 368.6 256 72.3
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 7.3e-100 367.9 273 69.2
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 7.3e-100 367.9 267 71.2
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.1e-98 364.0 265 71.3
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.8e-98 363.2 263 70.3
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.8e-98 363.2 271 67.9
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.1e-98 362.5 271 66.8
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.8e-98 361.3 268 69.8
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 6.8e-98 361.3 268 69.8
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 8.9e-98 360.9 265 69.1
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.5e-97 360.1 265 69.4
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 1.5e-97 360.1 271 69.0
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.6e-97 359.4 271 69.0
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.4e-97 359.0 283 66.8
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 4.4e-97 358.6 268 69.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 5.8e-97 358.2 279 66.3
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 1.7e-96 356.7 263 68.1
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.7e-96 356.7 268 66.8
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.7e-96 356.7 265 68.7
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.2e-96 356.3 276 64.1
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.2e-96 356.3 268 68.7
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 2.9e-96 355.9 263 67.3
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 4.9e-96 355.1 263 66.5
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 6.4e-96 354.8 260 70.0
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 6.4e-96 354.8 255 71.0
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 6.4e-96 354.8 270 67.0
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.4e-95 353.6 275 64.0
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.9e-95 353.2 274 67.2
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 2.4e-95 352.8 275 64.0
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 4.1e-95 352.1 263 66.9
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 4.1e-95 352.1 273 65.2
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 5.4e-95 351.7 263 67.3
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 1.2e-94 350.5 263 66.9
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 1.2e-94 350.5 263 66.9
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 1.2e-94 350.5 268 68.3
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.6e-94 350.1 255 69.4
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.6e-94 350.1 265 65.7
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 2.1e-94 349.7 265 66.8
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 2.1e-94 349.7 263 66.9
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.1e-94 349.7 262 67.6
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 3.5e-94 349.0 255 69.8
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 3.5e-94 349.0 255 69.8
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 6.0e-94 348.2 258 69.8
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 1.3e-93 347.1 263 66.5
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 1.3e-93 347.1 255 69.4
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 1.7e-93 346.7 254 68.5
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 2.3e-93 346.3 262 68.3
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.9e-93 345.5 271 65.3
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 5.0e-93 345.1 263 66.2
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 8.6e-93 344.4 263 66.5
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 8.6e-93 344.4 263 66.5
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 2.5e-92 342.8 265 67.9
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.5e-92 342.8 243 70.4
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 1.2e-91 340.5 267 65.9
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 2.1e-91 339.7 265 66.0
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 4.7e-91 338.6 254 67.7
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 1.8e-90 336.7 269 64.7
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 5.2e-90 335.1 266 65.8
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 8.9e-90 334.3 260 66.9
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 3.4e-89 332.4 268 63.8
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 5.8e-89 331.6 262 66.4
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 7.5e-89 331.3 268 63.4
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 7.5e-89 331.3 264 63.3
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.7e-88 330.1 260 66.5
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 4.9e-88 328.6 256 64.8
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.4e-87 327.0 271 62.4
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 4.1e-87 325.5 332 54.5
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 9.2e-87 324.3 264 65.9
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.2e-86 323.9 271 61.6
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.6e-86 322.0 271 61.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 6.0e-86 321.6 265 65.7
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.1e-84 317.4 269 58.7
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.1e-82 310.8 271 63.8
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.2e-81 307.4 271 63.8
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 4.3e-76 288.9 267 57.7
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 3.6e-75 285.8 268 58.2
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 7.8e-70 268.1 193 69.9
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 1.4e-66 257.3 259 52.9
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 9.0e-66 254.6 177 70.1
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 3.5e-62 242.7 181 65.7
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 4.6e-62 242.3 171 71.9
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.5e-60 237.3 175 68.6
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 3.8e-56 222.6 170 67.1
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.4e-55 220.7 169 67.5
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 2.1e-54 216.9 281 44.1
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 3.5e-54 216.1 275 42.2
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.8e-51 205.7 282 44.7
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 8.2e-51 204.9 137 72.3
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.5e-49 200.7 175 60.6
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 2.6e-49 199.9 276 43.5
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 3.5e-46 189.5 158 62.7
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.8e-42 177.2 270 42.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 1.9e-39 167.2 261 39.5
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.3e-36 156.0 152 53.9
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 7.4e-36 155.2 123 64.2
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 3.1e-26 123.2 84 67.9
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 2.6e-25 120.2 269 33.5
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 8.0e-22 108.6 78 67.9
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.3e-19 101.3 68 72.1
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 1.7e-16 90.9 67 65.7
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 3.8e-16 89.7 151 39.7
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 5.5e-15 85.9 65 66.2
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 7.2e-15 85.5 173 38.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.1e-14 82.4 68 55.9
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 2.0e-12 77.4 155 36.8
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 4.1e-10 69.7 79 43.0


User provided reference genes

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