Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 4.6e-160 567.8 275 100.0
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 8.3e-101 370.9 311 65.0
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 4.7e-72 275.4 295 52.2
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 3.8e-61 239.2 310 42.6
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 5.8e-54 215.3 310 40.3
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 4.6e-51 205.7 290 42.1
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 6.0e-51 205.3 297 38.4
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 6.7e-50 201.8 283 42.8
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 1.1e-47 194.5 303 39.6
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 6.9e-47 191.8 298 38.9
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 3.4e-46 189.5 274 42.0
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 5.8e-46 188.7 302 38.1
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 1.0e-45 188.0 310 35.8
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 1.1e-44 184.5 297 39.7
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.4e-44 184.1 298 37.9
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 9.3e-44 181.4 285 38.9
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 2.1e-43 180.3 308 37.3
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 2.7e-43 179.9 137 60.6
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 1.3e-42 177.6 292 36.6
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.8e-42 177.2 331 34.7
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 1.9e-41 173.7 311 35.4
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.5e-41 173.3 299 36.8
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 4.3e-41 172.6 310 36.5
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 7.4e-41 171.8 297 37.4
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.6e-40 170.6 307 38.1
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 1.6e-40 170.6 282 38.7
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 2.1e-40 170.2 291 37.1
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.7e-40 169.5 301 36.9
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 2.4e-39 166.8 291 35.4
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 4.1e-39 166.0 305 36.4
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 5.3e-39 165.6 292 38.0
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 5.3e-39 165.6 291 35.7
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 1.2e-38 164.5 294 39.8
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 1.2e-38 164.5 309 35.0
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.5e-38 164.1 261 39.5
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 2.0e-38 163.7 311 36.0
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 3.4e-38 162.9 309 36.6
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 3.4e-38 162.9 309 36.6
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 4.5e-38 162.5 309 36.6
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 4.5e-38 162.5 272 37.9
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 7.6e-38 161.8 305 38.0
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 7.6e-38 161.8 312 35.6
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 1.0e-37 161.4 273 35.5
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 1.3e-37 161.0 311 36.0
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 1.7e-37 160.6 213 44.6
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 2.9e-37 159.8 312 35.6
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 5.0e-37 159.1 138 55.1
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 6.5e-37 158.7 301 37.5
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.1e-36 157.9 310 35.5
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 2.5e-36 156.8 311 34.7
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 2.5e-36 156.8 298 34.6
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 3.2e-36 156.4 292 35.3
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 4.2e-36 156.0 211 42.2
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 4.2e-36 156.0 292 34.2
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 7.2e-36 155.2 305 35.4
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 3.5e-35 152.9 281 34.5
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 3.0e-34 149.8 149 50.3
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 3.0e-34 149.8 154 52.6
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 6.7e-34 148.7 141 51.8
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 6.7e-34 148.7 138 52.9
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 6.7e-34 148.7 137 54.7
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.5e-33 147.5 138 52.2
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 2.5e-33 146.7 141 51.8
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 2.5e-33 146.7 141 51.8
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.5e-33 146.7 282 35.1
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 3.3e-33 146.4 141 51.8
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 3.3e-33 146.4 141 51.8
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 4.3e-33 146.0 141 51.8
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 7.4e-33 145.2 255 35.7
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 1.6e-32 144.1 138 51.4
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 1.6e-32 144.1 138 50.7
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 6.3e-32 142.1 137 51.8
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 3.1e-31 139.8 138 50.7
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 4.1e-31 139.4 310 34.2
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 5.3e-31 139.0 363 31.7
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 3.4e-30 136.3 206 38.3
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 1.7e-29 134.0 148 46.6
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 5.0e-29 132.5 310 31.3
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 3.2e-28 129.8 211 40.3
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 9.4e-28 128.3 435 27.4
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.2e-27 127.9 166 44.6
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 1.0e-26 124.8 203 35.0
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 1.8e-26 124.0 275 32.4
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 3.0e-26 123.2 144 45.8
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 4.8e-24 115.9 221 33.0
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.4e-23 114.4 258 30.6
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 1.5e-22 110.9 159 42.1
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 5.9e-22 109.0 149 44.3
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 8.5e-21 105.1 129 46.5
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 1.2e-19 101.3 212 34.4
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 2.6e-17 93.6 211 28.9
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 4.4e-17 92.8 62 66.1
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.1e-15 88.2 254 29.1
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 2.6e-14 83.6 153 32.7
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 5.9e-14 82.4 255 27.1
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 5.5e-12 75.9 137 32.8
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 8.8e-10 68.6 180 27.8
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 7.5e-09 65.5 41 70.7
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 9.7e-09 65.1 41 61.0
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 1.3e-08 64.7 110 35.5
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 9.1e-07 58.5 126 31.7
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 4.5e-06 56.2 134 30.6


User provided reference genes

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