Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1750 Erigeron canadensis HOM05D004845 ORTHO05D005957 0.0e+00 2038.5 1131 100.0
HanXRQChr09g0276331 Helianthus annuus HOM05D004845 ORTHO05D005957 0.0e+00 1151.7 1155 63.4
Lsat_1_v5_gn_4_95940 Lactuca sativa HOM05D004845 ORTHO05D005957 1.2e-302 1043.5 1145 59.8
HanXRQChr05g0140141 Helianthus annuus HOM05D004845 ORTHO05D005957 9.2e-247 857.8 1146 54.3
Dinv30397 Davidia involucrata HOM05D004845 ORTHO05D005957 9.6e-212 741.5 1229 46.6
Dinv37932 Davidia involucrata HOM05D004845 ORTHO05D005957 1.4e-199 701.0 1254 45.5
QL05p015844 Quercus lobata HOM05D004845 ORTHO05D005957 3.9e-189 666.4 1283 43.5
Duzib160G0801 Durio zibethinus HOM05D004845 ORTHO05D005957 2.2e-171 607.4 1251 41.3
Thecc.06G108000 Theobroma cacao HOM05D004845 ORTHO05D005957 2.4e-170 604.0 1272 41.0
TAR629G3185 Trochodendron aralioides HOM05D004845 ORTHO05D005957 7.0e-170 602.4 1280 40.9
DCAR_026375 Daucus carota HOM05D004845 ORTHO05D005957 1.3e-168 598.2 1259 40.7
CiPaw.02G142000 Carya illinoinensis HOM05D004845 ORTHO05D005957 1.7e-168 597.8 1252 42.6
vmacro18819 Vaccinium macrocarpon HOM05D004845 ORTHO05D005957 8.5e-168 595.5 1244 41.8
Nn1g08771 Nelumbo nucifera HOM05D004845 ORTHO05D005957 9.4e-167 592.0 1234 41.4
MSTRG.22604 Avicennia marina HOM05D004845 ORTHO05D005957 1.4e-165 588.2 1255 42.5
Gohir.A05G133700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 1.4e-165 588.2 1252 41.7
FvH4_6g32970 Fragaria vesca HOM05D004845 ORTHO05D005957 1.2e-164 585.1 1252 40.8
FAN14G1946 Fragaria x ananassa HOM05D004845 ORTHO05D005957 3.3e-164 583.6 1252 40.9
Peaxi162Scf00038g01322 Petunia axillaris HOM05D004845 ORTHO05D005957 5.7e-164 582.8 1254 40.3
Potri.003G033100 Populus trichocarpa HOM05D004845 ORTHO05D005957 1.3e-163 581.6 1254 41.9
Sopen03g040190 Solanum pennellii HOM05D004845 ORTHO05D005957 2.8e-163 580.5 1235 41.0
Gohir.D05G135700 Gossypium hirsutum HOM05D004845 ORTHO05D005957 3.7e-163 580.1 1254 41.5
Sed0014548 Sechium edule HOM05D004845 ORTHO05D005957 4.1e-162 576.6 1249 41.5
Solyc03g121380.3 Solanum lycopersicum HOM05D004845 ORTHO05D005957 7.0e-162 575.9 1244 40.6
Manes.04G137600 Manihot esculenta HOM05D004845 ORTHO05D005957 3.5e-161 573.5 1196 41.8
Gorai.009G139700 Gossypium raimondii HOM05D004845 ORTHO05D005957 4.5e-161 573.2 1249 41.2
Cc04_g02180 Coffea canephora HOM05D004845 ORTHO05D005957 3.8e-160 570.1 1267 41.3
RcHm_v2.0_Chr2g0142521 Rosa chinensis HOM05D004845 ORTHO05D005957 3.8e-160 570.1 1259 41.1
Cfa003605 Carpinus fangiana HOM05D004845 ORTHO05D005957 8.5e-160 568.9 1186 42.5
arahy.Tifrunner.gnm1.ann1.JSQ5P9 Arachis hypogaea HOM05D004845 ORTHO05D005957 1.1e-159 568.5 1253 40.6
FAN02G0586 Fragaria x ananassa HOM05D004845 ORTHO05D005957 1.1e-159 568.5 1254 40.5
Atru.chr1.3636 Acer truncatum HOM05D004845 ORTHO05D005957 2.1e-158 564.3 1203 41.9
Sabra03G0019000 Salix brachista HOM05D004845 ORTHO05D005957 3.0e-157 560.5 1236 41.0
FAN09G4600 Fragaria x ananassa HOM05D004845 ORTHO05D005957 4.0e-157 560.1 1253 40.5
Rhsim08G0231600 Rhododendron simsii HOM05D004845 ORTHO05D005957 6.8e-157 559.3 1218 41.0
MELO3C013040.2 Cucumis melo HOM05D004845 ORTHO05D005957 8.8e-157 558.9 1246 40.4
GSVIVG01016889001 Vitis vinifera HOM05D004845 ORTHO05D005957 1.3e-155 555.1 1236 37.5
CsaV3_3G044010 Cucumis sativus L. HOM05D004845 ORTHO05D005957 2.2e-155 554.3 1245 40.0
Duzib235G0635 Durio zibethinus HOM05D004845 ORTHO05D005957 8.3e-155 552.4 1249 40.4
arahy.Tifrunner.gnm1.ann1.7F0ZFP Arachis hypogaea HOM05D004845 ORTHO05D005957 1.3e-152 545.0 1256 40.4
ClCG07G013620 Citrullus lanatus HOM05D004845 ORTHO05D005957 6.5e-152 542.7 1259 40.7
CANSAT56G3316 Cannabis sativa HOM05D004845 ORTHO05D005957 2.5e-151 540.8 1193 41.3
Prupe.3G052500 Prunus persica HOM05D004845 ORTHO05D005957 3.3e-151 540.4 1196 41.6
Migut.I01002 Erythranthe guttata HOM05D004845 ORTHO05D005957 1.2e-150 538.5 1239 41.4
CAN.G1668.10 Capsicum annuum HOM05D004845 ORTHO05D005957 2.1e-150 537.7 1153 40.5
Glyma.08G196100 Glycine max HOM05D004845 ORTHO05D005957 3.6e-150 537.0 1262 40.3
MD09G1196000 Malus domestica HOM05D004845 ORTHO05D005957 6.8e-149 532.7 1238 40.0
Glyma.07G012400 Glycine max HOM05D004845 ORTHO05D005957 9.8e-148 528.9 1266 40.4
Medtr8g015620 Medicago truncatula HOM05D004845 ORTHO05D005957 3.7e-147 526.9 1250 39.4
Ciclev10024729m.g Citrus clementina HOM05D004845 ORTHO05D005957 4.5e-145 520.0 1296 38.8
Ca_23299_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 7.3e-143 512.7 1256 37.7
Sed0023831 Sechium edule HOM05D004845 ORTHO05D005957 8.0e-142 509.2 1262 40.0
Lj3g0006882 Lotus japonicus HOM05D004845 ORTHO05D005957 5.2e-141 506.5 1257 38.8
Manes.11G028800 Manihot esculenta HOM05D004845 ORTHO05D005957 5.2e-141 506.5 1273 39.2
Oeu052809.1 Olea europaea HOM05D004845 ORTHO05D005957 6.4e-139 499.6 1092 40.8
Phvul.010G141800 Phaseolus vulgaris HOM05D004845 ORTHO05D005957 5.6e-135 486.5 1269 39.7
Hund07666 Selenicereus undatus HOM05D004845 ORTHO05D005957 9.5e-135 485.7 1170 39.5
Sc12g0009860 Simmondsia chinensis HOM05D004845 ORTHO05D005957 1.6e-134 485.0 1221 38.7
FAN05G2503 Fragaria x ananassa HOM05D004845 ORTHO05D005957 2.8e-134 484.2 1411 36.0
Actinidia32134 Actinidia chinensis HOM05D004845 ORTHO05D005957 4.0e-133 480.3 1057 41.2
Lj3g0020048 Lotus japonicus HOM05D004845 ORTHO05D005957 8.9e-133 479.2 1234 38.7
COL.COLO4_30609 Corchorus olitorius HOM05D004845 ORTHO05D005957 7.5e-132 476.1 1183 36.9
MD17G1176700 Malus domestica HOM05D004845 ORTHO05D005957 6.4e-131 473.0 1257 38.2
VMungo0331G0639 Vigna mungo HOM05D004845 ORTHO05D005957 5.4e-130 469.9 1253 38.3
THA.LOC104817934 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 7.8e-129 466.1 1283 34.1
TWI31G1049 Tripterygium wilfordii HOM05D004845 ORTHO05D005957 1.3e-128 465.3 1282 38.1
Cpa.g.sc131.35 Carica papaya HOM05D004845 ORTHO05D005957 2.3e-128 464.5 1168 38.7
Oeu026736.3 Olea europaea HOM05D004845 ORTHO05D005957 6.6e-128 463.0 1172 35.7
DCAR_007608 Daucus carota HOM05D004845 ORTHO05D005957 8.6e-128 462.6 1173 37.7
PSO170G6909 Papaver somniferum HOM05D004845 ORTHO05D005957 6.2e-126 456.4 1244 38.3
SGA_v2.0_scaffold71G23747 Striga asiatica HOM05D004845 ORTHO05D005957 3.1e-125 454.1 1170 37.7
Lalb_Chr04g0263091 Lupinus albus HOM05D004845 ORTHO05D005957 2.4e-122 444.5 1244 36.7
Aqoxy7G00060 Aquilegia oxysepala HOM05D004845 ORTHO05D005957 3.2e-122 444.1 1290 36.4
THA.LOC104810560 Tarenaya hassleriana HOM05D004845 ORTHO05D005957 1.1e-119 435.6 1284 34.3
PGR102G0505 Punica granatum HOM05D004845 ORTHO05D005957 2.1e-118 431.4 1217 37.6
EL10Ac9g21102 Beta vulgaris HOM05D004845 ORTHO05D005957 4.4e-116 423.7 1160 36.6
AUR62038325 Chenopodium quinoa HOM05D004845 ORTHO05D005957 8.4e-115 419.5 1177 33.6
Sp3g19330 Schrenkiella parvula HOM05D004845 ORTHO05D005957 7.1e-114 416.4 1210 35.7
AUR62023919 Chenopodium quinoa HOM05D004845 ORTHO05D005957 1.6e-113 415.2 1177 33.7
Thhalv10019924m.g Eutrema salsugineum HOM05D004845 ORTHO05D005957 1.7e-112 411.8 1176 34.7
AL3G35330 Arabidopsis lyrata HOM05D004845 ORTHO05D005957 7.3e-111 406.4 1257 36.1
Nitab4.5_0004848g0010 Nicotiana tabacum HOM05D004845 ORTHO05D005957 7.3e-111 406.4 1165 36.2
AT3G21290 Arabidopsis thaliana HOM05D004845 ORTHO05D005957 1.8e-109 401.7 1156 37.4
Aa31LG8G7990 Aethionema arabicum HOM05D004845 ORTHO05D005957 2.6e-108 397.9 1197 35.5
BcaB06g26218 Brassica carinata HOM05D004845 ORTHO05D005957 3.4e-108 397.5 1205 35.2
Carub.0003s2130 Capsella rubella HOM05D004845 ORTHO05D005957 2.4e-106 391.3 1220 35.2
Lj5C49T6 Lonicera japonica HOM05D004845 ORTHO05D005957 9.3e-106 389.4 992 36.1
BraA05t21625Z Brassica rapa HOM05D004845 ORTHO05D005957 7.8e-105 386.3 1118 35.9
A05p27330 Brassica napus HOM05D004845 ORTHO05D005957 1.0e-104 386.0 1120 35.8
Ah.01g016900 Amaranthus hybridus HOM05D004845 ORTHO05D005957 1.5e-103 382.1 1151 35.8
BcaC05g28184 Brassica carinata HOM05D004845 ORTHO05D005957 4.3e-103 380.6 1114 36.4
C05p42240 Brassica napus HOM05D004845 ORTHO05D005957 4.3e-103 380.6 1114 36.4
BolC5t32952H Brassica oleracea HOM05D004845 ORTHO05D005957 4.3e-103 380.6 1114 36.4
ATR0730G184 Amborella trichopoda HOM05D004845 ORTHO05D005957 1.5e-100 372.1 1237 34.7
CDE10G0270 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.4e-93 349.0 1200 34.7
CSS0001379 Camellia sinensis var. sinensis HOM05D004845 ORTHO05D005957 9.0e-93 346.3 805 41.6
Eucgr.J02886 Eucalyptus grandis HOM05D004845 ORTHO05D005957 4.5e-92 344.0 983 37.9
Psat4g193760 Pisum sativum HOM05D004845 ORTHO05D005957 1.9e-90 338.6 1008 36.0
SGA_v2.0_scaffold45G16992 Striga asiatica HOM05D004845 ORTHO05D005957 2.1e-86 325.1 1151 31.4
Zm00001eb006560 Zea mays HOM05D004845 ORTHO05D005957 5.7e-79 300.4 1247 32.6
Actinidia21742 Actinidia chinensis HOM05D004845 ORTHO05D005957 8.2e-78 296.6 842 31.7
SEGI_05846 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 2.2e-75 288.5 1257 30.8
Zm00001eb401540 Zea mays HOM05D004845 ORTHO05D005957 2.2e-75 288.5 1258 32.1
TPR.G8763 Trifolium pratense HOM05D004845 ORTHO05D005957 6.7e-72 276.9 1226 31.0
unitig_749.g14048 Utricularia gibba HOM05D004845 ORTHO05D005957 4.8e-70 270.8 988 34.4
Lalb_Chr15g0087461 Lupinus albus HOM05D004845 ORTHO05D005957 5.9e-68 263.8 1031 28.4
CDE10G0876 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 1.3e-67 262.7 443 42.9
SEGI_07021 Sequoiadendron giganteum HOM05D004845 ORTHO05D005957 1.6e-65 255.8 1226 30.5
BcaC09g49066 Brassica carinata HOM05D004845 ORTHO05D005957 6.1e-65 253.8 1195 29.5
Actinidia21743 Actinidia chinensis HOM05D004845 ORTHO05D005957 6.1e-57 227.3 328 47.6
Medtr8g015610 Medicago truncatula HOM05D004845 ORTHO05D005957 2.2e-54 218.8 894 29.0
CARHR097190 Cardamine hirsuta HOM05D004845 ORTHO05D005957 6.3e-54 217.2 1028 31.3
Haze_15920 Corylus avellana HOM05D004845 ORTHO05D005957 1.2e-52 213.0 594 34.2
MBI01_g37799_MAGBIO Magnolia biondii HOM05D004845 ORTHO05D005957 3.8e-51 208.0 606 34.3
HPP92_028291 Vanilla planifolia HOM05D004845 ORTHO05D005957 8.0e-49 200.3 218 54.1
Atru.chr1.3631 Acer truncatum HOM05D001194 ORTHO05D005909 9.1e-45 186.8 313 42.2
Lalb_Chr14g0372871 Lupinus albus HOM05D004845 ORTHO05D005957 1.3e-43 183.0 198 54.5
Mapoly0021s0057 Marchantia polymorpha HOM05D004845 ORTHO05D005957 1.9e-42 179.1 438 34.7
Duzib192G0218 Durio zibethinus HOM05D004845 ORTHO05D005957 7.2e-42 177.2 277 44.0
CDE10G0326 Ceratophyllum demersum HOM05D004845 ORTHO05D005957 2.6e-39 168.7 476 31.9
Lalb_Chr14g0372881 Lupinus albus HOM05D004845 ORTHO05D005957 3.5e-36 158.3 976 29.7
Os03g0187100 Oryza sativa ssp. japonica HOM05D004845 ORTHO05D005957 1.2e-33 149.8 327 34.6
AagrBONN_evm.TU.Sc2ySwM_344.5033 Anthoceros agrestis HOM05D004845 ORTHO05D005957 5.2e-32 144.4 369 30.4
SMO334G0114 Selaginella moellendorffii HOM05D004845 ORTHO05D005957 7.5e-31 140.6 372 34.7
BolC1t04240H Brassica oleracea HOM05D004845 ORTHO05D005957 3.7e-30 138.3 138 55.1
C01p42960 Brassica napus HOM05D004845 ORTHO05D005957 6.3e-30 137.5 121 59.5
unitig_749.g14049 Utricularia gibba HOM05D004845 ORTHO05D005957 5.9e-28 131.0 105 57.1
Pp3c12_1570 Physcomitrium patens HOM05D004845 ORTHO05D005957 1.7e-27 129.4 458 28.6
HPP92_028293 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.6e-27 127.5 128 51.6
Lsat_1_v5_gn_6_9320 Lactuca sativa HOM05D004845 ORTHO05D005957 1.4e-21 109.8 172 46.5
Ca_23298_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 3.5e-20 105.1 187 35.8
Actinidia32135 Actinidia chinensis HOM05D004845 ORTHO05D005957 3.9e-19 101.7 129 51.2
SHI11164 Sapria himalayana HOM05D004845 ORTHO05D003034 6.6e-19 100.9 64 71.9
C01p42950 Brassica napus HOM05D004845 ORTHO05D005957 7.3e-18 97.4 138 41.3
Ca_23296_v3 Cicer arietinum L. HOM05D004845 ORTHO05D005957 1.4e-16 93.2 227 33.5
CBR_g20995 Chara braunii HOM05D004845 ORTHO05D005957 3.1e-16 92.0 115 41.7
PGSC0003DMG400002508 Solanum tuberosum HOM05D004845 ORTHO05D005957 4.0e-16 91.7 128 51.6
Haze_15921 Corylus avellana HOM05D004845 ORTHO05D005957 1.2e-15 90.1 224 35.3
CBR_g20996 Chara braunii HOM05D004845 ORTHO05D005957 4.4e-15 88.2 169 34.9
Cpa.g.sc131.32 Carica papaya HOM05D004845 ORTHO05D005957 1.7e-14 86.3 128 46.9
Zm00001eb424050 Zea mays HOM05D002942 ORTHO05D003270 1.5e-10 73.2 60 53.3
SHI11167 Sapria himalayana HOM05D004845 ORTHO05D005957 5.2e-08 64.7 214 29.4
Medtr1g021875 Medicago truncatula HOM05D004845 ORTHO05D005957 4.4e-07 61.6 67 52.2
HPP92_028292 Vanilla planifolia HOM05D004845 ORTHO05D005957 6.4e-06 57.8 649 30.5


User provided reference genes

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