Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 1.8e-90 335.9 166 100.0
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 3.4e-49 198.7 174 66.1
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 2.3e-45 186.0 175 63.4
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 5.6e-36 154.8 172 55.2
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.4e-34 150.2 153 51.6
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.3e-32 143.7 148 52.0
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 8.4e-32 141.0 153 49.7
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.9e-31 139.8 162 46.9
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.6e-30 136.7 163 48.5
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 3.5e-30 135.6 168 45.8
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 2.3e-29 132.9 176 44.3
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 2.3e-29 132.9 159 48.4
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 5.1e-29 131.7 128 51.6
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.1e-28 130.6 158 48.1
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.5e-28 129.4 198 40.4
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 9.6e-28 127.5 141 46.1
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 9.6e-28 127.5 140 48.6
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 1.6e-27 126.7 146 46.6
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.6e-27 126.7 125 53.6
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 4.8e-27 125.2 140 47.1
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 6.2e-27 124.8 140 47.1
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 8.2e-27 124.4 134 47.8
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 1.1e-26 124.0 161 43.5
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.1e-26 124.0 160 45.0
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.8e-26 123.2 130 49.2
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.8e-26 123.2 142 47.2
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.8e-26 123.2 142 47.2
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 2.4e-26 122.9 120 53.3
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 2.4e-26 122.9 164 45.1
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 4.0e-26 122.1 153 43.8
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 4.0e-26 122.1 161 46.0
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 5.3e-26 121.7 132 47.7
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 5.3e-26 121.7 121 52.1
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 2.0e-25 119.8 146 45.9
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 2.0e-25 119.8 142 46.5
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 2.6e-25 119.4 133 45.9
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 2.6e-25 119.4 156 44.2
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 3.4e-25 119.0 123 51.2
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 4.5e-25 118.6 149 45.0
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 5.8e-25 118.2 144 47.2
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 7.6e-25 117.9 149 46.3
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 1.0e-24 117.5 158 42.4
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.7e-24 116.7 175 40.6
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 2.2e-24 116.3 153 42.5
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 2.9e-24 115.9 160 43.1
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 2.9e-24 115.9 148 43.9
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 2.9e-24 115.9 142 44.4
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 3.8e-24 115.5 117 49.6
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 6.5e-24 114.8 118 49.2
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 1.1e-23 114.0 146 46.6
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-23 114.0 139 47.5
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 1.1e-23 114.0 176 42.0
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 3.2e-23 112.5 162 40.7
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 3.2e-23 112.5 139 41.7
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 4.2e-23 112.1 138 44.2
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 7.1e-23 111.3 142 45.1
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 7.1e-23 111.3 155 43.9
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.2e-22 110.5 150 42.7
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.6e-22 110.2 176 39.2
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.6e-22 110.2 145 45.5
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 2.7e-22 109.4 171 39.2
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 4.6e-22 108.6 196 36.2
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 7.9e-22 107.8 159 42.8
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 7.9e-22 107.8 175 40.6
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 1.0e-21 107.5 162 43.2
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 1.0e-21 107.5 162 41.4
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.0e-21 107.5 160 40.0
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 1.0e-21 107.5 162 41.4
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.0e-21 107.5 158 42.4
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.0e-21 107.5 129 47.3
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 1.0e-21 107.5 127 44.1
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 1.0e-21 107.5 130 43.1
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 1.3e-21 107.1 161 38.5
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.8e-21 106.7 162 40.7
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 3.0e-21 105.9 175 37.7
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 3.0e-21 105.9 187 35.3
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 3.0e-21 105.9 207 34.8
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 3.9e-21 105.5 170 35.9
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 3.9e-21 105.5 132 47.7
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 5.1e-21 105.1 162 42.6
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 5.1e-21 105.1 162 42.6
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 5.1e-21 105.1 108 53.7
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 6.7e-21 104.8 145 42.1
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 1.1e-20 104.0 131 43.5
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.1e-20 104.0 144 43.1
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.5e-20 103.6 162 38.9
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 1.9e-20 103.2 135 42.2
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 3.3e-20 102.4 167 38.3
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 4.3e-20 102.1 133 40.6
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 4.3e-20 102.1 132 43.9
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 9.7e-20 100.9 164 37.8
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.3e-19 100.5 122 48.4
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 1.6e-19 100.1 164 39.0
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 2.8e-19 99.4 130 43.8
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.8e-19 99.4 128 45.3
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 3.7e-19 99.0 180 38.9
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 3.7e-19 99.0 180 33.9
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 6.3e-19 98.2 142 41.5
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 8.2e-19 97.8 140 40.0
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.4e-18 97.1 175 33.7
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.4e-18 96.3 185 34.1
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 2.4e-18 96.3 165 39.4
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 3.1e-18 95.9 142 40.8
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 3.1e-18 95.9 186 33.9
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 4.1e-18 95.5 195 35.4
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 5.3e-18 95.1 111 45.0
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 3.4e-17 92.4 192 32.3
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 4.5e-17 92.0 169 36.1
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 4.5e-17 92.0 135 42.2
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 7.7e-17 91.3 170 34.7
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 7.7e-17 91.3 190 31.6
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 7.7e-17 91.3 133 38.3
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 3.8e-16 89.0 170 34.1
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 5.0e-16 88.6 132 44.7
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 6.5e-16 88.2 190 33.2
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 1.1e-15 87.4 90 46.7
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 2.5e-15 86.3 177 32.8
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 3.2e-15 85.9 197 31.0
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 2.7e-14 82.8 164 34.1
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.4e-13 80.5 68 54.4
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 6.7e-13 78.2 118 38.1
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 1.1e-12 77.4 130 37.7
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 2.0e-12 76.6 86 48.8
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 2.0e-12 76.6 86 48.8
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 5.7e-12 75.1 121 38.8
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 5.7e-12 75.1 125 37.6
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 3.1e-10 69.3 92 39.1
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 4.1e-10 68.9 145 33.8
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 1.5e-09 67.0 132 31.1
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 2.0e-09 66.6 117 34.2
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 7.7e-09 64.7 119 35.3
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 6.5e-08 61.6 91 42.9
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 1.9e-07 60.1 116 33.6


User provided reference genes

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