Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 5.1e-224 780.8 401 100.0
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 1.3e-158 563.5 437 71.6
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 2.8e-158 562.4 413 73.4
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 5.5e-146 521.5 364 73.9
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 2.7e-145 519.2 389 69.4
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 2.3e-144 516.2 386 69.7
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 1.5e-143 513.5 392 69.1
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 1.8e-141 506.5 377 71.1
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 4.5e-140 501.9 351 74.4
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 1.3e-139 500.4 397 67.0
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 1.3e-139 500.4 347 74.6
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 5.0e-139 498.4 398 64.6
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 1.1e-138 497.3 377 69.2
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 1.9e-138 496.5 398 64.6
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 1.6e-137 493.4 362 70.7
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 2.8e-137 492.7 364 70.3
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 3.6e-137 492.3 358 69.8
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 6.1e-137 491.5 362 71.3
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 6.1e-137 491.5 353 70.0
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 4.0e-136 488.8 351 69.8
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 1.2e-135 487.3 347 70.6
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 1.2e-135 487.3 299 79.6
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 1.2e-135 487.3 381 66.7
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 1.5e-135 486.9 351 70.1
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 3.4e-135 485.7 365 69.3
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 7.5e-135 484.6 296 79.7
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 7.5e-135 484.6 361 67.6
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 9.8e-135 484.2 356 69.9
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 2.9e-134 482.6 389 65.0
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 1.1e-133 480.7 365 67.9
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 1.8e-133 479.9 373 67.0
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 5.4e-133 478.4 370 67.6
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 7.0e-133 478.0 362 67.4
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 9.2e-133 477.6 373 64.9
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 2.0e-132 476.5 335 71.3
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 3.5e-132 475.7 362 68.0
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 3.5e-132 475.7 353 68.6
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 3.5e-132 475.7 340 70.9
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 4.6e-132 475.3 335 71.0
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 1.0e-131 474.2 372 65.1
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 1.0e-131 474.2 387 63.6
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 1.0e-131 474.2 338 69.2
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 1.7e-131 473.4 353 68.0
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 2.3e-131 473.0 373 64.3
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 3.0e-131 472.6 344 67.2
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 3.0e-131 472.6 384 65.4
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 3.0e-131 472.6 410 62.7
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 5.0e-131 471.9 373 65.7
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 5.0e-131 471.9 378 65.6
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 5.0e-131 471.9 360 66.9
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 6.6e-131 471.5 390 64.4
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 6.6e-131 471.5 374 66.3
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 8.6e-131 471.1 374 65.8
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 1.1e-130 470.7 340 68.8
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 2.5e-130 469.5 366 66.9
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 3.3e-130 469.2 350 67.7
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 4.3e-130 468.8 358 68.7
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 7.3e-130 468.0 296 77.7
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 2.8e-129 466.1 378 63.8
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 2.8e-129 466.1 357 66.9
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 1.2e-127 460.7 399 62.9
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 2.0e-127 459.9 376 64.6
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 5.8e-127 458.4 297 74.7
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 9.8e-127 457.6 385 63.9
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 1.1e-125 454.1 395 61.0
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 1.9e-125 453.4 374 64.2
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 3.2e-125 452.6 289 75.4
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 7.0e-125 451.4 313 70.9
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 1.0e-123 447.6 267 82.8
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 2.3e-123 446.4 400 58.5
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 3.0e-123 446.0 360 65.3
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 3.0e-123 446.0 372 64.0
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 3.9e-123 445.7 361 64.3
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 3.9e-123 445.7 379 61.2
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 1.5e-122 443.7 277 78.7
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 2.5e-122 443.0 452 53.5
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 7.3e-122 441.4 362 64.1
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 1.4e-120 437.2 344 64.8
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 3.4e-119 432.6 280 76.1
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 2.2e-118 429.9 321 68.8
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 3.2e-117 426.0 391 57.3
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 2.1e-116 423.3 354 64.7
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 3.3e-114 416.0 518 47.1
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 1.4e-112 410.6 326 64.1
Pp3c19_6070 Physcomitrium patens HOM05D006104 ORTHO05D008303 1.9e-109 400.2 369 58.0
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 1.2e-108 397.5 260 74.6
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 1.1e-106 391.0 374 59.4
FAN04G1807 Fragaria x ananassa HOM05D006104 ORTHO05D008303 2.8e-105 386.3 471 47.8
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 6.2e-105 385.2 388 57.2
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 1.4e-104 384.0 357 60.2
SMO364G0667 Selaginella moellendorffii HOM05D006104 ORTHO05D008303 1.5e-103 380.6 366 55.7
Mapoly0068s0059 Marchantia polymorpha HOM05D006104 ORTHO05D008303 1.3e-102 377.5 308 63.0
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 1.7e-102 377.1 244 75.8
MCO16G393 Micromonas commoda HOM05D006104 ORTHO05D008303 7.1e-101 371.7 350 57.4
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 3.5e-100 369.4 338 59.5
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 5.6e-98 362.1 292 64.7
CBR_g22386 Chara braunii HOM05D006104 ORTHO05D008303 9.9e-95 351.3 400 49.5
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 3.3e-90 336.3 251 66.9
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 1.8e-83 313.9 264 60.6
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 3.9e-83 312.8 249 64.7
Cre12.g507950 Chlamydomonas reinhardtii HOM05D006104 ORTHO05D008303 3.3e-82 309.7 388 48.7
Pp3c7_24690 Physcomitrium patens HOM05D006104 ORTHO05D008303 5.6e-82 308.9 322 49.4
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 1.6e-81 307.4 244 65.6
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 6.2e-81 305.4 239 64.4
PRCOL_00000403 Prasinoderma coloniale HOM05D006104 ORTHO05D008303 9.3e-77 291.6 293 55.6
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 2.7e-76 290.0 252 59.1
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 5.1e-75 285.8 199 72.4
QL02p056562 Quercus lobata HOM05D006104 ORTHO05D008303 5.0e-70 269.2 159 79.2
Os10g0493900 Oryza sativa ssp. japonica HOM05D006104 ORTHO05D008303 4.6e-68 262.7 160 76.2
SEGI_16808 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 5.5e-61 239.2 155 73.5
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 1.4e-56 224.6 227 59.5
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 2.9e-54 216.9 201 60.7
Psat5g144680 Pisum sativum HOM05D006104 ORTHO05D008303 3.3e-42 176.8 186 54.8
arahy.Tifrunner.gnm1.ann1.2Q0DPQ Arachis hypogaea HOM05D006104 ORTHO05D008303 2.3e-27 127.5 119 55.5
arahy.Tifrunner.gnm1.ann1.LG1UYC Arachis hypogaea HOM05D006104 ORTHO05D008303 2.0e-26 124.4 124 52.4
BraA02t04668Z Brassica rapa HOM05D006104 ORTHO05D008303 2.0e-26 124.4 136 52.2
Psat5g144720 Pisum sativum HOM05D006104 ORTHO05D008303 6.3e-25 119.4 109 55.0
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 1.1e-21 108.6 134 48.5
arahy.Tifrunner.gnm1.ann1.12AD17 Arachis hypogaea HOM05D000052 ORTHO05D000046 3.0e-19 100.5 61 77.0
Psat7g173760 Pisum sativum HOM05D006104 ORTHO05D008303 1.1e-16 92.0 69 66.7
Cpa.g.c43318 Carica papaya HOM05D006104 ORTHO05D117575 2.4e-16 90.9 260 29.2
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 4.3e-13 80.1 156 45.5
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 5.2e-11 73.2 134 39.6
Psat4g208520 Pisum sativum HOM05D006104 ORTHO05D008303 1.3e-09 68.6 89 50.6
Pp3s42_60 Physcomitrium patens HOM05D000182 ORTHO05D011688 8.3e-09 65.9 264 25.8


User provided reference genes

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