Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 1.5e-189 666.0 330 100.0
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.3e-60 237.7 216 60.2
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 1.2e-53 214.5 223 52.0
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 2.9e-36 156.8 228 40.8
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 3.3e-35 153.3 226 41.6
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 4.7e-34 149.4 186 43.5
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 7.0e-30 135.6 170 41.2
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.2e-29 134.8 194 42.8
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 2.3e-28 130.6 208 38.5
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 5.0e-28 129.4 210 37.1
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 4.3e-27 126.3 194 39.7
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 9.5e-27 125.2 210 36.2
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 3.6e-26 123.2 178 42.7
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 1.1e-25 121.7 226 39.4
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.4e-25 121.3 224 34.4
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 2.0e-24 117.5 245 32.7
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.6e-24 117.1 226 38.5
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.2e-23 114.0 239 35.6
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.1e-22 111.7 217 37.3
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 1.1e-22 111.7 219 33.3
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.1e-22 111.7 155 40.6
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 1.4e-22 111.3 154 39.0
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 2.4e-22 110.5 155 39.4
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 9.2e-22 108.6 166 41.0
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.7e-21 107.1 207 36.7
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 4.6e-21 106.3 162 40.7
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 4.6e-21 106.3 219 32.0
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 6.0e-21 105.9 152 40.1
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 6.0e-21 105.9 188 36.7
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.3e-20 104.0 219 31.5
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.1e-19 101.7 161 39.8
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.5e-19 100.5 153 34.6
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 2.1e-18 97.4 188 37.2
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 2.1e-18 97.4 228 33.8
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 3.6e-18 96.7 235 32.3
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 3.6e-18 96.7 163 37.4
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 4.7e-18 96.3 210 31.4
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 6.2e-18 95.9 127 40.9
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 6.8e-17 92.4 179 35.8
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 1.2e-16 91.7 125 38.4
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.6e-16 90.5 155 35.5
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 5.8e-16 89.4 154 35.1
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 5.8e-16 89.4 129 37.2
HanXRQChr09g0268661 Helianthus annuus HOM05D008092 ORTHO05D010277 7.6e-16 89.0 66 65.2
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.3e-15 88.2 218 29.4
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.3e-15 88.2 222 31.1
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 2.2e-15 87.4 138 39.9
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.2e-15 87.4 183 33.9
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 6.4e-15 85.9 241 30.7
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 3.2e-14 83.6 171 33.3
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 1.2e-13 81.6 101 44.6
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 2.1e-13 80.9 119 37.8
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 2.1e-13 80.9 165 35.2
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 7.8e-13 79.0 156 37.2
SEGI_08853 Sequoiadendron giganteum HOM05D008092 ORTHO05D004758 1.9e-11 74.3 114 36.0
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 3.6e-10 70.1 232 24.6
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 1.4e-09 68.2 187 33.7
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 8.9e-09 65.5 67 44.8
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 8.9e-09 65.5 157 31.2
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 1.5e-08 64.7 167 28.7
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 2.6e-08 63.9 67 43.3
MELO3C009977.2 Cucumis melo HOM05D008092 ORTHO05D010277 3.8e-07 60.1 113 38.1
Haze_14721 Corylus avellana HOM05D008092 ORTHO05D010277 6.4e-07 59.3 113 36.3
Pp3c2_13540 Physcomitrium patens HOM05D008092 ORTHO05D010277 4.2e-06 56.6 112 28.6
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 9.3e-06 55.5 53 45.3


User provided reference genes

Program Settings