Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1467 Erigeron canadensis HOM05D005812 ORTHO05D007232 1.9e-99 365.9 193 100.0
Lsat_1_v5_gn_4_141220 Lactuca sativa HOM05D005812 ORTHO05D007232 8.5e-76 287.3 202 81.2
HanXRQChr10g0305381 Helianthus annuus HOM05D005812 ORTHO05D007232 3.0e-65 252.3 195 73.3
HanXRQChr09g0254761 Helianthus annuus HOM05D005812 ORTHO05D007232 3.7e-63 245.4 203 73.4
Dinv21904 Davidia involucrata HOM05D005812 ORTHO05D007232 5.0e-44 181.8 199 56.8
ECA232G0795 Erigeron canadensis HOM05D005812 ORTHO05D007232 2.5e-43 179.5 198 59.1
GSVIVG01002272001 Vitis vinifera HOM05D005812 ORTHO05D007232 9.4e-43 177.6 194 55.2
HanXRQChr05g0145211 Helianthus annuus HOM05D005812 ORTHO05D007232 1.5e-40 170.2 200 55.5
Actinidia06567 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.2e-39 166.4 201 53.2
Actinidia20016 Actinidia chinensis HOM05D005812 ORTHO05D007232 4.1e-38 162.2 196 52.0
Actinidia28235 Actinidia chinensis HOM05D005812 ORTHO05D007232 2.1e-34 149.8 198 49.5
Dinv13192 Davidia involucrata HOM05D005812 ORTHO05D007232 3.6e-34 149.1 176 56.2
Cc07_g15160 Coffea canephora HOM05D005812 ORTHO05D007232 4.7e-34 148.7 197 48.7
Hma1.2p1_1428F.1_g282935 Hydrangea macrophylla HOM05D005812 ORTHO05D007232 1.4e-33 147.1 203 49.8
DCAR_014222 Daucus carota HOM05D005812 ORTHO05D007232 2.6e-32 142.9 200 49.0
TAR628G0897 Trochodendron aralioides HOM05D005812 ORTHO05D007232 5.7e-32 141.7 190 46.3
Rhsim08G0010800 Rhododendron simsii HOM05D005812 ORTHO05D007232 8.3e-31 137.9 202 46.5
HanXRQChr09g0255041 Helianthus annuus HOM05D005812 ORTHO05D007232 1.8e-30 136.7 111 73.0
Oeu051807.1 Olea europaea HOM05D005812 ORTHO05D007232 1.8e-30 136.7 152 51.3
PGR102G1433 Punica granatum HOM05D005812 ORTHO05D007232 1.8e-30 136.7 192 44.8
Peaxi162Scf00212g00413 Petunia axillaris HOM05D005812 ORTHO05D007232 1.6e-29 133.7 196 45.4
Nitab4.5_0000083g0250 Nicotiana tabacum HOM05D005812 ORTHO05D007232 2.7e-29 132.9 197 45.7
MSTRG.3778 Avicennia marina HOM05D005812 ORTHO05D007232 4.6e-29 132.1 197 46.2
Solyc04g055250.4 Solanum lycopersicum HOM05D005812 ORTHO05D007232 1.0e-28 131.0 189 43.4
Nitab4.5_0004651g0010 Nicotiana tabacum HOM05D005812 ORTHO05D007232 1.7e-28 130.2 197 44.7
DCAR_010089 Daucus carota HOM05D005812 ORTHO05D007232 2.9e-28 129.4 160 50.0
Sopen04g025100 Solanum pennellii HOM05D005812 ORTHO05D007232 2.9e-28 129.4 189 43.4
Migut.L00124 Erythranthe guttata HOM05D005812 ORTHO05D007232 8.6e-28 127.9 200 45.5
Oeu001791.1 Olea europaea HOM05D005812 ORTHO05D007232 3.3e-27 125.9 134 53.0
MSTRG.2569 Avicennia marina HOM05D005812 ORTHO05D007232 1.2e-26 124.0 153 45.8
MSTRG.15713 Avicennia marina HOM05D005812 ORTHO05D007232 2.1e-26 123.2 195 44.6
ClCG10G008980 Citrullus lanatus HOM05D005812 ORTHO05D007232 2.8e-26 122.9 166 49.4
Potri.007G093200 Populus trichocarpa HOM05D005812 ORTHO05D007232 2.8e-26 122.9 190 41.1
CiPaw.04G099800 Carya illinoinensis HOM05D005812 ORTHO05D007232 6.1e-26 121.7 198 42.9
Nn5g30114 Nelumbo nucifera HOM05D005812 ORTHO05D007232 6.1e-26 121.7 191 41.9
MSTRG.23345 Avicennia marina HOM05D005812 ORTHO05D007232 8.0e-26 121.3 194 42.3
Nn1g05352 Nelumbo nucifera HOM05D003496 ORTHO05D003909 1.8e-25 120.2 186 39.2
Nitab4.5_0000897g0060 Nicotiana tabacum HOM05D005812 ORTHO05D007232 1.8e-25 120.2 173 46.2
Eucgr.H04782 Eucalyptus grandis HOM05D005812 ORTHO05D007232 4.0e-25 119.0 195 40.0
Sed0017830 Sechium edule HOM05D005812 ORTHO05D007232 6.8e-25 118.2 159 49.7
Atru.chr4.60 Acer truncatum HOM05D005812 ORTHO05D007232 1.5e-24 117.1 189 41.8
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 2.0e-24 116.7 195 43.1
Gohir.A11G201100 Gossypium hirsutum HOM05D005812 ORTHO05D007232 2.6e-24 116.3 228 38.6
Cpa.g.sc230.1 Carica papaya HOM05D005812 ORTHO05D007232 3.4e-24 115.9 190 43.2
Ciclev10026269m.g Citrus clementina HOM05D005812 ORTHO05D007232 3.4e-24 115.9 189 43.4
MD15G1323600 Malus domestica HOM05D005812 ORTHO05D007232 5.8e-24 115.2 189 41.3
SalBow5G0456 Salvia bowleyana HOM05D005812 ORTHO05D007232 1.3e-23 114.0 216 38.9
Duzib264G1072 Durio zibethinus HOM05D005812 ORTHO05D007232 1.7e-23 113.6 193 42.0
Duzib187G0152 Durio zibethinus HOM05D005812 ORTHO05D007232 3.7e-23 112.5 190 42.1
QL06p049491 Quercus lobata HOM05D005812 ORTHO05D007232 3.7e-23 112.5 193 43.0
Thecc.01G101100 Theobroma cacao HOM05D005812 ORTHO05D007232 3.7e-23 112.5 193 42.5
CiPaw.03G142200 Carya illinoinensis HOM05D005812 ORTHO05D007232 6.4e-23 111.7 189 43.4
Cfa002656 Carpinus fangiana HOM05D005812 ORTHO05D007232 8.3e-23 111.3 200 42.0
Gohir.D11G221400 Gossypium hirsutum HOM05D005812 ORTHO05D007232 8.3e-23 111.3 199 40.2
Gorai.007G238400 Gossypium raimondii HOM05D005812 ORTHO05D007232 8.3e-23 111.3 199 40.2
CAN.G18.15 Capsicum annuum HOM05D005812 ORTHO05D007232 1.4e-22 110.5 151 43.7
Duzib147G1550 Durio zibethinus HOM05D005812 ORTHO05D007232 1.9e-22 110.2 199 40.7
Prupe.6G187400 Prunus persica HOM05D005812 ORTHO05D007232 1.9e-22 110.2 190 41.6
Aqoxy6G00789 Aquilegia oxysepala HOM05D005812 ORTHO05D007232 3.2e-22 109.4 198 40.4
Lj2C549G6 Lonicera japonica HOM05D005812 ORTHO05D007232 4.1e-22 109.0 110 58.2
Hund16289 Selenicereus undatus HOM05D005812 ORTHO05D007232 7.0e-22 108.2 188 39.4
CAN.G18.16 Capsicum annuum HOM05D005812 ORTHO05D007232 9.2e-22 107.8 151 43.7
Peaxi162Scf00611g00015 Petunia axillaris HOM05D005812 ORTHO05D007232 1.2e-21 107.5 153 45.8
AUR62002005 Chenopodium quinoa HOM05D005812 ORTHO05D007232 3.5e-21 105.9 191 39.3
Gohir.A12G083366 Gossypium hirsutum HOM05D005812 ORTHO05D007232 6.0e-21 105.1 178 42.7
BcaNung06391 Brassica carinata HOM05D005812 ORTHO05D007232 7.8e-21 104.8 192 41.1
MBI02_g31269_MAGBIO Magnolia biondii HOM05D005812 ORTHO05D007232 1.0e-20 104.4 161 41.0
Gorai.011G113200 Gossypium raimondii HOM05D005812 ORTHO05D007232 1.7e-20 103.6 190 40.5
AUR62003797 Chenopodium quinoa HOM05D005812 ORTHO05D007232 3.0e-20 102.8 134 45.5
Gohir.D10G103600 Gossypium hirsutum HOM05D005812 ORTHO05D007232 3.9e-20 102.4 190 40.5
CANSAT01G0800 Cannabis sativa HOM05D005812 ORTHO05D007232 6.6e-20 101.7 190 38.4
CsaV3_4G008880 Cucumis sativus L. HOM05D005812 ORTHO05D007232 6.6e-20 101.7 148 43.9
Gohir.A10G085300 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.5e-19 100.5 190 40.0
Ah.02g122540 Amaranthus hybridus HOM05D005812 ORTHO05D007232 2.5e-19 99.8 186 41.4
Thhalv10026058m.g Eutrema salsugineum HOM05D005812 ORTHO05D007232 4.3e-19 99.0 193 38.9
Sp7g35990 Schrenkiella parvula HOM05D005812 ORTHO05D007232 4.3e-19 99.0 193 38.9
C01p00910 Brassica napus HOM05D005812 ORTHO05D007232 5.6e-19 98.6 192 38.0
PGSC0003DMG400001876 Solanum tuberosum HOM05D005812 ORTHO05D007232 5.6e-19 98.6 157 39.5
Gorai.008G090000 Gossypium raimondii HOM05D005812 ORTHO05D007232 7.3e-19 98.2 179 43.6
BcaNung00911 Brassica carinata HOM05D005812 ORTHO05D007232 1.2e-18 97.4 193 38.3
Carub.0007s0184 Capsella rubella HOM05D005812 ORTHO05D007232 1.2e-18 97.4 189 39.2
Manes.12G134500 Manihot esculenta HOM05D005812 ORTHO05D007232 1.6e-18 97.1 166 40.4
vmacro12958 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 1.6e-18 97.1 164 42.7
A01p00790 Brassica napus HOM05D005812 ORTHO05D007232 2.1e-18 96.7 191 37.7
BraA01t00082Z Brassica rapa HOM05D005812 ORTHO05D007232 2.1e-18 96.7 191 37.7
Lj6g0021205 Lotus japonicus HOM05D005812 ORTHO05D007232 3.6e-18 95.9 180 40.0
BcaB03g12290 Brassica carinata HOM05D005812 ORTHO05D007232 4.7e-18 95.5 187 37.4
TPR.G17850 Trifolium pratense HOM05D005812 ORTHO05D007232 4.7e-18 95.5 186 39.2
AT4G39900 Arabidopsis thaliana HOM05D005812 ORTHO05D007232 6.2e-18 95.1 194 37.6
BolC3t20101H Brassica oleracea HOM05D005812 ORTHO05D007232 1.1e-17 94.4 192 38.0
BcaC01g00328 Brassica carinata HOM05D005812 ORTHO05D007232 1.4e-17 94.0 192 38.0
Glyma.11G240400 Glycine max HOM05D005812 ORTHO05D007232 1.4e-17 94.0 184 40.2
SalBow5G2541 Salvia bowleyana HOM05D005812 ORTHO05D007232 1.4e-17 94.0 150 42.7
A08p23250 Brassica napus HOM05D005812 ORTHO05D007232 1.8e-17 93.6 192 38.5
Ca_16522_v3 Cicer arietinum L. HOM05D005812 ORTHO05D007232 1.8e-17 93.6 186 38.2
Lalb_Chr23g0277481 Lupinus albus HOM05D005812 ORTHO05D007232 1.8e-17 93.6 188 37.2
PSO781G0022 Papaver somniferum HOM05D005812 ORTHO05D007232 1.8e-17 93.6 187 36.9
RcHm_v2.0_Chr2g0113441 Rosa chinensis HOM05D005812 ORTHO05D007232 1.8e-17 93.6 159 42.1
BraA08t34281Z Brassica rapa HOM05D005812 ORTHO05D007232 4.0e-17 92.4 192 38.0
THA.LOC104807691 Tarenaya hassleriana HOM05D005812 ORTHO05D007232 4.0e-17 92.4 186 38.7
MELO3C018959.2 Cucumis melo HOM05D005812 ORTHO05D007232 6.8e-17 91.7 101 54.5
PSO541G0090 Papaver somniferum HOM05D005812 ORTHO05D007232 6.8e-17 91.7 198 34.8
AL7G12150 Arabidopsis lyrata HOM05D005812 ORTHO05D007232 8.9e-17 91.3 186 37.1
FvH4_1g20820 Fragaria vesca HOM05D005812 ORTHO05D007232 8.9e-17 91.3 175 41.1
Sc03g0002070 Simmondsia chinensis HOM05D005812 ORTHO05D007232 8.9e-17 91.3 189 39.2
Glyma.18G016900 Glycine max HOM05D005812 ORTHO05D007232 1.2e-16 90.9 184 40.2
VMungo1383G2465 Vigna mungo HOM05D005812 ORTHO05D007232 1.2e-16 90.9 184 40.2
CARHR246800 Cardamine hirsuta HOM05D005812 ORTHO05D007232 1.5e-16 90.5 189 36.5
C03p78490 Brassica napus HOM05D005812 ORTHO05D007232 2.6e-16 89.7 192 37.5
Phvul.001G252300 Phaseolus vulgaris HOM05D005812 ORTHO05D007232 2.6e-16 89.7 184 39.7
unitig_88.g27721 Utricularia gibba HOM05D005812 ORTHO05D007232 3.4e-16 89.4 197 39.6
Psat5g090240 Pisum sativum HOM05D005812 ORTHO05D007232 1.7e-15 87.0 186 36.0
arahy.Tifrunner.gnm1.ann1.LSP3Z9 Arachis hypogaea HOM05D005812 ORTHO05D007232 4.9e-15 85.5 182 38.5
arahy.Tifrunner.gnm1.ann1.I4SKYX Arachis hypogaea HOM05D005812 ORTHO05D007232 6.4e-15 85.1 182 37.9
Medtr3g087150 Medicago truncatula HOM05D005812 ORTHO05D007232 2.4e-14 83.2 188 36.2
EL10Ac6g15110 Beta vulgaris HOM05D005812 ORTHO05D007232 9.2e-14 81.3 186 34.9
Manes.13G075600 Manihot esculenta HOM05D005812 ORTHO05D007232 2.7e-13 79.7 167 35.9
unitig_32.g11811 Utricularia gibba HOM05D005812 ORTHO05D007232 3.0e-12 76.3 192 32.8
BcaNung00793 Brassica carinata HOM05D005812 ORTHO05D007232 4.7e-10 68.9 152 36.2
Rhsim10G0163100 Rhododendron simsii HOM05D001481 ORTHO05D001865 8.1e-10 68.2 168 34.5
Ah.03g143620 Amaranthus hybridus HOM05D005812 ORTHO05D007232 1.2e-08 64.3 170 37.1
TWI74G1407 Tripterygium wilfordii HOM05D005812 ORTHO05D007232 1.5e-08 63.9 132 35.6
Gohir.D12G083200 Gossypium hirsutum HOM05D005812 ORTHO05D007232 1.7e-07 60.5 104 40.4


User provided reference genes

Program Settings