Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1410 Erigeron canadensis HOM05D007214 ORTHO05D008907 6.9e-100 367.9 270 100.0
Migut.H00870 Erythranthe guttata HOM05D007214 ORTHO05D008907 8.3e-29 131.7 266 56.4
Lsat_1_v5_gn_4_180400 Lactuca sativa HOM05D007214 ORTHO05D008907 2.4e-28 130.2 210 66.2
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 4.1e-28 129.4 266 33.5
TWI12G0421 Tripterygium wilfordii HOM05D007214 ORTHO05D008907 4.1e-28 129.4 264 54.5
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 7.0e-28 128.6 269 34.2
FvH4_6g49740 Fragaria vesca HOM05D007214 ORTHO05D008907 1.5e-25 120.9 267 53.9
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 4.7e-24 115.9 260 33.5
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.1e-23 114.8 286 43.7
Peaxi162Scf00129g00734 Petunia axillaris HOM05D007214 ORTHO05D008907 6.8e-23 112.1 285 31.6
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 7.5e-22 108.6 286 30.8
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 7.5e-22 108.6 263 30.0
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 7.5e-22 108.6 281 31.3
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 2.2e-21 107.1 265 55.5
Sp2g17170 Schrenkiella parvula HOM05D007214 ORTHO05D008907 8.3e-21 105.1 264 42.4
BolC7t44250H Brassica oleracea HOM05D007214 ORTHO05D008907 1.9e-17 94.0 268 43.7
Zm00001eb280040 Zea mays HOM05D007214 ORTHO05D008907 5.6e-17 92.4 255 27.5
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 7.3e-17 92.0 299 30.1
BcaC06g33744 Brassica carinata HOM05D007214 ORTHO05D008907 7.3e-17 92.0 265 44.9
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 1.6e-16 90.9 267 43.4
Ca_08472_v3 Cicer arietinum L. HOM05D007214 ORTHO05D008907 2.1e-16 90.5 267 30.3
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 3.6e-16 89.7 305 29.5
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 4.7e-16 89.4 268 42.5
HanXRQChr09g0265731 Helianthus annuus HOM05D007214 ORTHO05D008907 4.7e-16 89.4 236 54.2
SGA_v2.0_scaffold205G41734 Striga asiatica HOM05D007214 ORTHO05D008907 4.7e-16 89.4 266 48.1
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 2.3e-15 87.0 289 39.4
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 2.3e-15 87.0 268 43.3
RhsimUnG0169100 Rhododendron simsii HOM05D007214 ORTHO05D008907 5.2e-15 85.9 225 55.6
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 2.0e-14 84.0 277 49.5
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 5.8e-14 82.4 261 28.0
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 5.8e-14 82.4 226 31.0
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.7e-13 80.9 226 29.6
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 1.7e-13 80.9 231 28.6
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 3.7e-13 79.7 225 36.9
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 4.9e-13 79.3 226 49.1
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.4e-12 77.8 196 31.6
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 3.2e-12 76.6 225 35.6
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 4.1e-12 76.3 225 40.9
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 4.1e-12 76.3 238 34.9
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 4.1e-12 76.3 223 29.6
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 5.4e-12 75.9 228 54.4
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 7.1e-12 75.5 225 28.0
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 1.2e-11 74.7 225 28.4
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.2e-11 74.7 227 50.2
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 6.0e-11 72.4 222 33.3
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 6.0e-11 72.4 233 28.3
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 1.3e-10 71.2 225 39.1
Oeu060587.1 Olea europaea HOM05D007214 ORTHO05D008907 2.3e-10 70.5 126 37.3
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 2.3e-10 70.5 228 52.2
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 3.0e-10 70.1 232 47.8
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.0e-10 70.1 196 48.5
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 3.0e-10 70.1 240 52.1
TAR629G1667 Trochodendron aralioides HOM05D000068 ORTHO05D000084 3.0e-10 70.1 196 52.0
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 5.1e-10 69.3 224 34.8
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 1.9e-09 67.4 225 45.8
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 4.3e-09 66.2 225 48.4
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 4.3e-09 66.2 234 26.1
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 9.6e-09 65.1 226 42.9
Carub.0005s0686 Capsella rubella HOM05D007214 ORTHO05D008907 1.2e-08 64.7 225 49.8
Psat3g176600 Pisum sativum HOM05D007214 ORTHO05D008907 3.6e-08 63.2 106 36.8
Cc07_g02800 Coffea canephora HOM05D007214 ORTHO05D008907 6.2e-08 62.4 230 44.8
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 1.8e-07 60.8 225 43.6
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 4.0e-07 59.7 225 37.8
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 6.8e-07 58.9 130 47.7
Hund13295 Selenicereus undatus HOM05D007214 ORTHO05D008907 6.8e-07 58.9 143 34.3
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 8.9e-07 58.5 222 24.8
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 1.2e-06 58.2 232 41.8
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 1.2e-06 58.2 199 53.3
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.2e-06 58.2 125 34.4
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 3.4e-06 56.6 125 35.2
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 4.4e-06 56.2 118 33.1
COL.COLO4_36999 Corchorus olitorius HOM05D007214 ORTHO05D008907 5.8e-06 55.8 208 55.8
Rhsim10G0029100 Rhododendron simsii HOM05D007214 ORTHO05D008907 7.6e-06 55.5 136 31.6


User provided reference genes

Program Settings