Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 0.0e+00 1275.8 623 100.0
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 8.8e-284 979.9 578 79.2
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 5.7e-283 977.2 619 75.3
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 2.5e-262 908.7 586 73.4
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 4.7e-261 904.4 584 73.5
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 4.4e-259 897.9 585 72.8
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 5.8e-259 897.5 584 72.8
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 9.8e-259 896.7 584 72.3
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 1.9e-257 892.5 579 70.8
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 1.9e-257 892.5 579 70.8
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 2.4e-257 892.1 615 67.8
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 3.5e-256 888.3 582 72.0
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 7.8e-256 887.1 593 69.5
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 7.8e-256 887.1 577 71.2
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 7.8e-256 887.1 577 70.9
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 1.3e-255 886.3 595 69.6
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 1.7e-255 885.9 583 71.0
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 1.9e-254 882.5 616 67.5
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 3.3e-254 881.7 578 72.1
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 4.3e-254 881.3 592 71.3
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 5.6e-254 880.9 580 70.7
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 7.3e-254 880.6 589 70.3
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 1.6e-253 879.4 605 67.8
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 2.1e-253 879.0 578 70.6
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 2.8e-253 878.6 579 69.6
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 6.2e-253 877.5 575 71.8
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.1e-252 876.7 585 71.1
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 1.8e-252 875.9 574 71.4
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 3.1e-252 875.2 588 70.4
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 5.2e-252 874.4 587 70.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 1.5e-251 872.8 616 67.4
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 1.5e-251 872.8 574 71.1
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.0e-251 872.5 580 70.7
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 5.8e-251 870.9 605 68.4
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 1.7e-250 869.4 582 70.3
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.1e-249 866.7 715 60.6
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 1.9e-249 865.9 599 68.4
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 1.9e-249 865.9 581 69.7
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 1.2e-248 863.2 590 68.5
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 2.1e-248 862.4 581 70.6
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 2.1e-248 862.4 591 68.4
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 3.5e-248 861.7 585 70.8
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 6.0e-248 860.9 574 70.6
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.3e-247 859.8 574 71.1
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 5.1e-247 857.8 605 67.6
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.5e-246 856.3 588 68.4
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 7.3e-246 854.0 583 67.9
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 9.6e-246 853.6 583 69.0
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 2.8e-245 852.0 587 68.1
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 8.1e-245 850.5 579 68.9
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 1.1e-244 850.1 587 67.5
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 4.0e-244 848.2 579 68.9
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 1.2e-243 846.7 579 68.7
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.5e-243 846.3 589 68.1
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 2.6e-243 845.5 579 68.7
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 5.8e-243 844.3 582 68.4
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 9.9e-243 843.6 578 69.4
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.4e-241 839.7 582 67.4
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 2.4e-241 839.0 591 66.5
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 3.2e-241 838.6 590 68.0
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 4.2e-241 838.2 579 67.5
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 3.0e-239 832.0 589 67.4
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 3.0e-239 832.0 588 66.0
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 5.1e-239 831.2 589 68.4
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 9.6e-238 827.0 581 68.0
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.1e-237 825.9 575 68.0
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 1.1e-236 823.5 591 66.5
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.3e-234 816.6 578 66.8
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 1.9e-233 812.8 580 65.3
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 1.2e-232 810.1 574 68.3
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 3.0e-231 805.4 578 67.3
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 1.5e-230 803.1 545 69.4
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 1.3e-229 800.0 586 65.4
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 4.5e-227 791.6 540 69.3
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 7.1e-225 784.3 592 64.0
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 8.7e-223 777.3 576 63.9
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 5.6e-222 774.6 592 62.8
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.1e-221 772.7 572 64.9
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 3.7e-221 771.9 545 65.5
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 1.1e-220 770.4 577 63.3
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 1.4e-220 770.0 588 63.1
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 6.9e-220 767.7 592 62.3
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 6.9e-220 767.7 592 62.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 6.9e-220 767.7 564 65.1
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 5.8e-219 764.6 584 62.8
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 3.5e-216 755.4 586 62.5
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 4.6e-216 755.0 587 62.5
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 8.2e-213 744.2 585 61.9
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 2.9e-210 735.7 609 60.8
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 9.3e-209 730.7 615 57.6
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 2.7e-200 702.6 577 60.8
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 2.4e-196 689.5 577 58.9
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 7.2e-185 651.4 579 57.3
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 5.9e-179 631.7 544 56.2
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 7.7e-179 631.3 576 54.9
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 4.4e-174 615.5 581 52.8
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 3.0e-167 592.8 377 72.1
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 2.2e-165 586.6 592 50.3
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 3.1e-164 582.8 473 59.2
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 9.2e-164 581.3 599 50.6
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 3.0e-159 566.2 569 49.9
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.5e-129 466.8 543 47.9
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 5.6e-121 439.1 255 79.6
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 7.6e-94 349.0 210 75.2
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 2.5e-68 264.2 197 62.9
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 2.1e-59 234.6 198 56.1
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 7.2e-52 209.5 211 51.7
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 1.4e-50 205.3 107 85.0
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 9.8e-41 172.6 136 57.4
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 1.6e-27 128.6 80 77.5
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 1.4e-26 125.6 99 55.6
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 1.2e-25 122.5 65 78.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 1.9e-23 115.2 65 75.4
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 7.1e-15 86.7 79 53.2
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 7.8e-14 83.2 43 88.4
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 1.3e-13 82.4 37 94.6
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 3.0e-13 81.3 133 40.6
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 2.8e-11 74.7 39 82.1


User provided reference genes

Program Settings