Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1405 Erigeron canadensis HOM05D007503 ORTHO05D009487 8.2e-38 159.8 78 100.0
HanXRQChr02g0039651 Helianthus annuus HOM05D007503 ORTHO05D009487 9.4e-26 119.8 78 75.6
Hma1.2p1_0123F.1_g057900 Hydrangea macrophylla HOM05D007503 ORTHO05D009487 9.8e-23 109.8 63 77.8
Rhsim01G0105600 Rhododendron simsii HOM05D007503 ORTHO05D009487 8.3e-22 106.7 63 77.8
Dinv06977 Davidia involucrata HOM05D007503 ORTHO05D009487 1.1e-21 106.3 62 75.8
Actinidia06811 Actinidia chinensis HOM05D007503 ORTHO05D009487 3.1e-21 104.8 75 66.7
vmacro20740 Vaccinium macrocarpon HOM05D007503 ORTHO05D009487 3.1e-21 104.8 63 76.2
GSVIVG01010020001 Vitis vinifera HOM05D007503 ORTHO05D009487 7.0e-21 103.6 63 76.2
Cc09_g03530 Coffea canephora HOM05D007503 ORTHO05D009487 2.0e-20 102.1 75 66.7
TWI56G0335 Tripterygium wilfordii HOM05D007503 ORTHO05D009487 3.5e-20 101.3 80 63.8
DCAR_007994 Daucus carota HOM05D007503 ORTHO05D009487 5.9e-20 100.5 65 72.3
DCAR_023852 Daucus carota HOM05D007503 ORTHO05D009487 1.7e-19 99.0 65 70.8
PSO729G0165 Papaver somniferum HOM05D007503 ORTHO05D009487 2.3e-19 98.6 68 70.6
THA.LOC104822606 Tarenaya hassleriana HOM05D007503 ORTHO05D009487 2.9e-19 98.2 68 69.1
THA.LOC104815587 Tarenaya hassleriana HOM05D007503 ORTHO05D009487 5.0e-19 97.4 68 70.6
FvH4_1g27230 Fragaria vesca HOM05D007503 ORTHO05D009487 1.1e-18 96.3 78 64.1
FAN19G2707 Fragaria x ananassa HOM05D007503 ORTHO05D009487 1.1e-18 96.3 78 64.1
FAN23G0073 Fragaria x ananassa HOM05D007503 ORTHO05D009487 1.1e-18 96.3 78 64.1
Manes.01G240301 Manihot esculenta HOM05D007503 ORTHO05D009487 1.1e-18 96.3 65 66.2
SalBow6G4878 Salvia bowleyana HOM05D007503 ORTHO05D009487 1.1e-18 96.3 85 61.2
Haze_14049 Corylus avellana HOM05D007503 ORTHO05D009487 1.5e-18 95.9 63 69.8
Haze_14060 Corylus avellana HOM05D007503 ORTHO05D009487 1.5e-18 95.9 63 69.8
FAN26G0784 Fragaria x ananassa HOM05D000757 ORTHO05D000622 3.3e-18 94.7 73 67.1
Nitab4.5_0001653g0060 Nicotiana tabacum HOM05D007503 ORTHO05D009487 5.5e-18 94.0 61 70.5
Hund06856 Selenicereus undatus HOM05D007503 ORTHO05D009487 5.5e-18 94.0 75 64.0
Eucgr.I00239 Eucalyptus grandis HOM05D007503 ORTHO05D009487 1.2e-17 92.8 62 72.6
Nitab4.5_0011656g0020 Nicotiana tabacum HOM05D007503 ORTHO05D009487 1.2e-17 92.8 55 72.7
AT3G14430 Arabidopsis thaliana HOM05D007503 ORTHO05D009487 1.6e-17 92.4 68 67.6
CiPaw.03G009100 Carya illinoinensis HOM05D007503 ORTHO05D009487 1.6e-17 92.4 61 68.9
MD17G1272500 Malus domestica HOM05D007503 ORTHO05D009487 2.1e-17 92.0 75 64.0
Migut.F01879 Erythranthe guttata HOM05D007503 ORTHO05D009487 2.8e-17 91.7 55 74.5
Glyma.18G047300 Glycine max HOM05D007503 ORTHO05D009487 2.8e-17 91.7 64 62.5
Gohir.A11G170200 Gossypium hirsutum HOM05D007503 ORTHO05D009487 2.8e-17 91.7 76 61.8
Gohir.D11G177200 Gossypium hirsutum HOM05D007503 ORTHO05D009487 2.8e-17 91.7 76 61.8
Gorai.007G189300 Gossypium raimondii HOM05D007503 ORTHO05D009487 2.8e-17 91.7 76 61.8
Glyma.11G203700 Glycine max HOM05D007503 ORTHO05D009487 3.6e-17 91.3 64 62.5
RcHm_v2.0_Chr3g0487701 Rosa chinensis HOM05D007503 ORTHO05D009487 3.6e-17 91.3 75 61.3
CARHR089340 Cardamine hirsuta HOM05D007503 ORTHO05D009487 4.7e-17 90.9 63 66.7
Phvul.006G084000 Phaseolus vulgaris HOM05D007503 ORTHO05D009487 4.7e-17 90.9 64 62.5
Sc09g0004610 Simmondsia chinensis HOM05D007503 ORTHO05D009487 4.7e-17 90.9 69 65.2
Lalb_Chr20g0117211 Lupinus albus HOM05D007503 ORTHO05D009487 6.1e-17 90.5 64 65.6
Solyc03g058340.3 Solanum lycopersicum HOM05D007503 ORTHO05D009487 6.1e-17 90.5 78 61.5
Sopen03g015570 Solanum pennellii HOM05D007503 ORTHO05D009487 6.1e-17 90.5 78 61.5
AL3G26810 Arabidopsis lyrata HOM05D007503 ORTHO05D009487 1.0e-16 89.7 68 67.6
BraA01t03971Z Brassica rapa HOM05D007503 ORTHO05D009487 1.0e-16 89.7 68 64.7
QL02p056384 Quercus lobata HOM05D007503 ORTHO05D009487 1.0e-16 89.7 65 66.2
Carub.0003s1415 Capsella rubella HOM05D007503 ORTHO05D009487 1.4e-16 89.4 68 63.2
unitig_0.g938 Utricularia gibba HOM05D001953 ORTHO05D001904 1.8e-16 89.0 84 54.8
A01p39280 Brassica napus HOM05D007503 ORTHO05D009487 2.3e-16 88.6 68 63.2
Lj6g0027028 Lotus japonicus HOM05D007503 ORTHO05D009487 2.3e-16 88.6 64 62.5
Zm00001eb175060 Zea mays HOM05D007503 ORTHO05D009487 2.3e-16 88.6 73 61.6
BcaC09g48410 Brassica carinata HOM05D007503 ORTHO05D009487 3.0e-16 88.2 68 61.8
Prupe.3G011500 Prunus persica HOM05D007503 ORTHO05D009487 3.0e-16 88.2 78 57.7
Sp3g12730 Schrenkiella parvula HOM05D007503 ORTHO05D009487 3.0e-16 88.2 68 63.2
C01p50080 Brassica napus HOM05D007503 ORTHO05D009487 4.0e-16 87.8 68 61.8
BolC1t04962H Brassica oleracea HOM05D007503 ORTHO05D009487 4.0e-16 87.8 68 61.8
MD09G1282700 Malus domestica HOM05D007503 ORTHO05D009487 4.0e-16 87.8 62 69.4
Medtr3g063970 Medicago truncatula HOM05D007503 ORTHO05D009487 4.0e-16 87.8 65 64.6
Nn1g09784 Nelumbo nucifera HOM05D007503 ORTHO05D009487 4.0e-16 87.8 69 65.2
BcaB06g25385 Brassica carinata HOM05D007503 ORTHO05D009487 8.9e-16 86.7 68 61.8
BolC5t33967H Brassica oleracea HOM05D007503 ORTHO05D009487 8.9e-16 86.7 68 61.8
CANSAT80G2883 Cannabis sativa HOM05D007503 ORTHO05D009487 8.9e-16 86.7 69 60.9
CAN.G326.18 Capsicum annuum HOM05D007503 ORTHO05D009487 8.9e-16 86.7 75 58.7
Thhalv10021919m.g Eutrema salsugineum HOM05D007503 ORTHO05D009487 8.9e-16 86.7 61 65.6
Nitab4.5_0002233g0020 Nicotiana tabacum HOM05D007503 ORTHO05D009487 8.9e-16 86.7 77 59.7
Zm00001eb036330 Zea mays HOM05D007503 ORTHO05D009487 8.9e-16 86.7 73 60.3
BcaC05g29084 Brassica carinata HOM05D007503 ORTHO05D009487 1.2e-15 86.3 68 61.8
Ciclev10013261m.g Citrus clementina HOM05D007503 ORTHO05D009487 1.2e-15 86.3 62 66.1
Thecc.09G340100 Theobroma cacao HOM05D007503 ORTHO05D009487 1.2e-15 86.3 76 61.8
A05p34950 Brassica napus HOM05D007503 ORTHO05D009487 1.5e-15 85.9 68 61.8
BraA05t22309Z Brassica rapa HOM05D007503 ORTHO05D009487 1.5e-15 85.9 68 61.8
CDE05G2177 Ceratophyllum demersum HOM05D007503 ORTHO05D009487 1.5e-15 85.9 64 62.5
Peaxi162Scf00253g00725 Petunia axillaris HOM05D007503 ORTHO05D009487 2.0e-15 85.5 75 57.3
Potri.014G105250 Populus trichocarpa HOM05D007503 ORTHO05D009487 2.6e-15 85.1 62 62.9
C05p52900 Brassica napus HOM05D007503 ORTHO05D009487 3.4e-15 84.7 63 61.9
COL.COLO4_13441 Corchorus olitorius HOM05D007503 ORTHO05D009487 3.4e-15 84.7 76 59.2
Sed0018329 Sechium edule HOM05D007503 ORTHO05D009487 3.4e-15 84.7 65 63.1
ClCG01G008330 Citrullus lanatus HOM05D007503 ORTHO05D009487 4.4e-15 84.3 66 62.1
Aa31LG8G1690 Aethionema arabicum HOM05D007503 ORTHO05D009487 5.7e-15 84.0 68 60.3
Duzib211G0566 Durio zibethinus HOM05D007503 ORTHO05D009487 5.7e-15 84.0 76 59.2
MELO3C025073.2 Cucumis melo HOM05D007503 ORTHO05D009487 7.5e-15 83.6 66 60.6
CsaV3_5G020250 Cucumis sativus L. HOM05D007503 ORTHO05D009487 9.8e-15 83.2 66 62.1
Aqoxy5G03063 Aquilegia oxysepala HOM05D007503 ORTHO05D009487 3.7e-14 81.3 63 63.5
Os08g0528601 Oryza sativa ssp. japonica HOM05D007503 ORTHO05D009487 3.7e-14 81.3 73 58.9
PGR119G1426 Punica granatum HOM05D007503 ORTHO05D009487 2.4e-13 78.6 62 64.5
Pp3c11_25150 Physcomitrium patens HOM05D007503 ORTHO05D009487 3.2e-13 78.2 55 69.1
Sabra14G0077600 Salix brachista HOM05D007503 ORTHO05D009487 4.1e-13 77.8 62 58.1
Sabra02G0134700 Salix brachista HOM05D007503 ORTHO05D009487 7.0e-13 77.0 63 55.6
Pp3c7_7140 Physcomitrium patens HOM05D007503 ORTHO05D009487 6.6e-11 70.5 58 63.8
Aa31LG10G1620 Aethionema arabicum HOM05D007503 ORTHO05D009487 1.1e-10 69.7 67 53.7
Cpa.g.c46349 Carica papaya HOM05D007503 ORTHO05D009487 1.9e-10 68.9 68 52.9
Cpa.g.sc44.91 Carica papaya HOM05D007503 ORTHO05D009487 1.9e-10 68.9 68 52.9
Lsat_1_v5_gn_9_48861 Lactuca sativa HOM05D007503 ORTHO05D009487 7.3e-10 67.0 57 64.9
HanXRQChr14g0445891 Helianthus annuus HOM05D007503 ORTHO05D009487 1.2e-09 66.2 55 65.5
CSS0042421 Camellia sinensis var. sinensis HOM05D007503 ORTHO05D009487 4.4e-07 57.8 45 62.2
PGSC0003DMG400000976 Solanum tuberosum HOM05D007503 ORTHO05D009487 1.7e-06 55.8 58 55.2
Mapoly0109s0063 Marchantia polymorpha HOM05D007503 ORTHO05D009487 4.9e-06 54.3 39 69.2


User provided reference genes

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