Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1399 Erigeron canadensis HOM05D002242 ORTHO05D002275 2.1e-150 535.8 297 100.0
Lsat_1_v5_gn_9_49640 Lactuca sativa HOM05D002242 ORTHO05D002275 4.7e-49 199.1 292 50.7
HanXRQChr04g0112041 Helianthus annuus HOM05D002242 ORTHO05D002275 1.4e-45 187.6 295 44.7
Actinidia08657 Actinidia chinensis HOM05D002242 ORTHO05D002275 2.0e-15 87.4 281 31.3
QL09p008666 Quercus lobata HOM05D002242 ORTHO05D002275 4.4e-15 86.3 291 33.7
Rhsim03G0209500 Rhododendron simsii HOM05D002242 ORTHO05D002275 4.1e-13 79.7 220 35.0
Dinv29268 Davidia involucrata HOM05D002242 ORTHO05D002275 2.7e-12 77.0 209 34.9
Manes.02G144300 Manihot esculenta HOM05D002242 ORTHO05D002275 6.0e-12 75.9 189 37.6
PGR142G4389 Punica granatum HOM05D002242 ORTHO05D002275 6.0e-12 75.9 286 28.3
Haze_00202 Corylus avellana HOM05D002242 ORTHO05D002275 7.8e-12 75.5 288 32.6
Oeu060992.1 Olea europaea HOM05D002242 ORTHO05D002275 3.0e-11 73.6 196 36.2
Cc02_g01420 Coffea canephora HOM05D002242 ORTHO05D002275 3.9e-11 73.2 301 27.9
Cfa016239 Carpinus fangiana HOM05D002242 ORTHO05D002275 8.6e-11 72.0 285 31.9
MELO3C008501.2 Cucumis melo HOM05D002242 ORTHO05D002275 8.6e-11 72.0 288 29.9
CsaV3_3G019790 Cucumis sativus L. HOM05D002242 ORTHO05D002275 1.5e-10 71.2 288 30.9
Hma1.2p1_0404F.1_g145270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 5.6e-10 69.3 140 39.3
Hma1.2p1_1587F.1_g292270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 5.6e-10 69.3 140 39.3
ClCG05G008990 Citrullus lanatus HOM05D002242 ORTHO05D002275 9.5e-10 68.6 289 29.8
Peaxi162Scf00740g00136 Petunia axillaris HOM05D002242 ORTHO05D002275 9.5e-10 68.6 211 32.2
Sopen03g022850 Solanum pennellii HOM05D002242 ORTHO05D002275 1.6e-09 67.8 222 29.3
Gohir.A12G249200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 2.8e-09 67.0 199 33.7
Gohir.D12G250000 Gossypium hirsutum HOM05D002242 ORTHO05D002275 2.8e-09 67.0 199 33.7
MD01G1217700 Malus domestica HOM05D002242 ORTHO05D002275 2.8e-09 67.0 88 50.0
Psat6g034840 Pisum sativum HOM05D002242 ORTHO05D002275 2.8e-09 67.0 285 30.5
BraA10t43133Z Brassica rapa HOM05D002242 ORTHO05D002275 3.6e-09 66.6 281 30.2
Duzib084G0563 Durio zibethinus HOM05D002242 ORTHO05D002275 3.6e-09 66.6 192 35.4
MD07G1286900 Malus domestica HOM05D002242 ORTHO05D002275 3.6e-09 66.6 214 34.6
Nn1g00284 Nelumbo nucifera HOM05D002242 ORTHO05D002275 3.6e-09 66.6 106 47.2
Prupe.2G309000 Prunus persica HOM05D002242 ORTHO05D002275 3.6e-09 66.6 85 49.4
CiPaw.05G197700 Carya illinoinensis HOM05D002242 ORTHO05D002275 4.7e-09 66.2 263 31.6
Gorai.008G268100 Gossypium raimondii HOM05D002242 ORTHO05D002275 6.2e-09 65.9 199 33.7
Lj4g0010373 Lotus japonicus HOM05D002242 ORTHO05D002275 6.2e-09 65.9 189 31.2
TWI39G0876 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 6.2e-09 65.9 205 33.2
vmacro06390 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 6.2e-09 65.9 210 33.3
VMungo0647G2336 Vigna mungo HOM05D002242 ORTHO05D002275 6.2e-09 65.9 75 52.0
BcaC04g20515 Brassica carinata HOM05D002242 ORTHO05D002275 1.1e-08 65.1 281 30.2
Manes.01G184600 Manihot esculenta HOM05D002242 ORTHO05D002275 1.1e-08 65.1 110 45.5
THA.LOC104825150 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 1.4e-08 64.7 123 39.8
Thecc.03G200400 Theobroma cacao HOM05D002242 ORTHO05D002275 1.4e-08 64.7 192 33.3
CAN.G481.20 Capsicum annuum HOM05D002242 ORTHO05D002275 1.8e-08 64.3 295 27.5
Solyc03g083050.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 1.8e-08 64.3 223 29.6
A10p10510 Brassica napus HOM05D002242 ORTHO05D002275 2.3e-08 63.9 284 29.6
Rhsim01G0174300 Rhododendron simsii HOM05D002242 ORTHO05D002275 2.3e-08 63.9 301 27.9
BcaNung01619 Brassica carinata HOM05D002242 ORTHO05D002275 3.1e-08 63.5 112 38.4
RcHm_v2.0_Chr1g0380431 Rosa chinensis HOM05D002242 ORTHO05D002275 3.1e-08 63.5 203 33.0
Sed0027126 Sechium edule HOM05D002242 ORTHO05D002275 3.1e-08 63.5 82 48.8
Atru.chr12.2237 Acer truncatum HOM05D002242 ORTHO05D002275 6.8e-08 62.4 282 31.6
Phvul.001G075100 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 6.8e-08 62.4 75 50.7
TAR425G0001 Trochodendron aralioides HOM05D002242 ORTHO05D002275 6.8e-08 62.4 207 30.4
Ah.13g070390 Amaranthus hybridus HOM05D002242 ORTHO05D002275 8.9e-08 62.0 110 39.1
C01p24200 Brassica napus HOM05D002242 ORTHO05D002275 8.9e-08 62.0 108 41.7
Duzib205G1627 Durio zibethinus HOM05D002242 ORTHO05D002275 8.9e-08 62.0 193 31.6
Gohir.D03G115200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.2e-07 61.6 76 47.4
MBI06_g38007_MAGBIO Magnolia biondii HOM05D002242 ORTHO05D002275 1.2e-07 61.6 291 26.5
Nitab4.5_0007888g0030 Nicotiana tabacum HOM05D002242 ORTHO05D002275 1.2e-07 61.6 203 32.5
Potri.015G011900 Populus trichocarpa HOM05D002242 ORTHO05D002275 1.2e-07 61.6 107 41.1
A01p19250 Brassica napus HOM05D002242 ORTHO05D002275 1.5e-07 61.2 113 38.1
FvH4_7g31360 Fragaria vesca HOM05D002242 ORTHO05D002275 1.5e-07 61.2 279 29.4
FAN06G3788 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.5e-07 61.2 279 29.4
Gohir.A03G051900 Gossypium hirsutum HOM05D002242 ORTHO05D002275 1.5e-07 61.2 76 47.4
Gorai.003G121500 Gossypium raimondii HOM05D002242 ORTHO05D002275 1.5e-07 61.2 76 47.4
BcaB08g35662 Brassica carinata HOM05D002242 ORTHO05D002275 2.0e-07 60.8 284 27.8
C09p42730 Brassica napus HOM05D002242 ORTHO05D002275 2.0e-07 60.8 284 29.6
BolC9t57149H Brassica oleracea HOM05D002242 ORTHO05D002275 2.0e-07 60.8 284 29.6
Ciclev10021650m.g Citrus clementina HOM05D002242 ORTHO05D002275 2.0e-07 60.8 294 31.0
Sed0023472 Sechium edule HOM05D002242 ORTHO05D002275 2.0e-07 60.8 89 48.3
FAN06G4446 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.6e-07 60.5 279 31.5
CANSAT21G1534 Cannabis sativa HOM05D002242 ORTHO05D002275 3.4e-07 60.1 103 38.8
FAN03G3456 Fragaria x ananassa HOM05D002242 ORTHO05D002275 3.4e-07 60.1 104 42.3
BcaC09g50536 Brassica carinata HOM05D002242 ORTHO05D002275 4.4e-07 59.7 108 41.7
BolC1t02376H Brassica oleracea HOM05D002242 ORTHO05D002275 4.4e-07 59.7 108 41.7
Medtr1g007905 Medicago truncatula HOM05D002242 ORTHO05D002275 4.4e-07 59.7 195 30.3
THA.LOC104811912 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 4.4e-07 59.7 76 44.7
unitig_748.g7293 Utricularia gibba HOM05D002242 ORTHO05D002275 5.8e-07 59.3 81 48.1
AT4G27810 Arabidopsis thaliana HOM05D002242 ORTHO05D002275 7.5e-07 58.9 83 43.4
BcaC03g14465 Brassica carinata HOM05D002242 ORTHO05D002275 7.5e-07 58.9 285 27.7
BraA01t01867Z Brassica rapa HOM05D002242 ORTHO05D002275 7.5e-07 58.9 120 36.7
Thhalv10027290m.g Eutrema salsugineum HOM05D002242 ORTHO05D002275 7.5e-07 58.9 111 36.9
Ciclev10021848m.g Citrus clementina HOM05D002242 ORTHO05D002275 9.8e-07 58.5 291 29.9
Sabra15G0009600 Salix brachista HOM05D002242 ORTHO05D002275 1.3e-06 58.2 110 40.9
Sp6g15180 Schrenkiella parvula HOM05D002242 ORTHO05D002275 1.3e-06 58.2 284 29.2
C07p55720 Brassica napus HOM05D002242 ORTHO05D002275 1.7e-06 57.8 89 43.8
FAN01G0248 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.7e-06 57.8 72 50.0
Oeu041061.1 Olea europaea HOM05D002242 ORTHO05D002275 2.2e-06 57.4 198 31.3
EL10Ac3g05266 Beta vulgaris HOM05D002242 ORTHO05D002275 2.9e-06 57.0 122 34.4
A02p11370 Brassica napus HOM05D002242 ORTHO05D002275 2.9e-06 57.0 114 39.5
BolC7t46052H Brassica oleracea HOM05D002242 ORTHO05D002275 2.9e-06 57.0 89 42.7
BraA02t06201Z Brassica rapa HOM05D002242 ORTHO05D002275 2.9e-06 57.0 114 39.5
Carub.0008s1322 Capsella rubella HOM05D002242 ORTHO05D002275 2.9e-06 57.0 102 42.2
Ca_12786_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 2.9e-06 57.0 187 29.9
Ca_12789_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 2.9e-06 57.0 187 29.9
Nitab4.5_0005514g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.9e-06 57.0 207 30.4
Sp7g25790 Schrenkiella parvula HOM05D002242 ORTHO05D002275 2.9e-06 57.0 89 41.6
GSVIVG01038561001 Vitis vinifera HOM05D002242 ORTHO05D002275 2.9e-06 57.0 201 29.9
BcaB05g22000 Brassica carinata HOM05D002242 ORTHO05D002275 3.7e-06 56.6 96 42.7
A03p57530 Brassica napus HOM05D002242 ORTHO05D002275 3.7e-06 56.6 108 38.0
BraA03t14821Z Brassica rapa HOM05D002242 ORTHO05D002275 3.7e-06 56.6 108 38.0
AL7G24830 Arabidopsis lyrata HOM05D002242 ORTHO05D002275 4.9e-06 56.2 91 44.0
Carub.0007s1301 Capsella rubella HOM05D002242 ORTHO05D002275 4.9e-06 56.2 92 42.4
SalBow4G0604 Salvia bowleyana HOM05D002242 ORTHO05D002275 4.9e-06 56.2 110 39.1
Aqoxy4G02751 Aquilegia oxysepala HOM05D002242 ORTHO05D002275 6.4e-06 55.8 291 28.2
Thhalv10014570m.g Eutrema salsugineum HOM05D002242 ORTHO05D002275 6.4e-06 55.8 285 28.8
Hund27189 Selenicereus undatus HOM05D002242 ORTHO05D002275 6.4e-06 55.8 310 28.7
CiPaw.06G045500 Carya illinoinensis HOM05D002242 ORTHO05D002275 8.3e-06 55.5 194 32.5
TAR636G3588 Trochodendron aralioides HOM05D002242 ORTHO05D002275 8.3e-06 55.5 114 40.4


User provided reference genes

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