Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 2.1e-169 599.0 314 100.0
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 5.4e-104 381.7 299 69.6
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 1.3e-60 237.7 254 53.1
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 3.1e-59 233.0 253 53.0
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 2.2e-57 226.9 247 50.2
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 2.9e-57 226.5 260 50.0
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 2.9e-57 226.5 255 49.8
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 3.5e-55 219.5 248 50.4
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 4.6e-55 219.2 263 46.8
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 8.7e-54 214.9 236 53.0
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 1.1e-53 214.5 264 46.2
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 1.1e-53 214.5 264 46.2
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 1.5e-53 214.2 256 49.2
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 2.1e-52 210.3 245 50.2
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 3.6e-52 209.5 257 47.5
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 4.8e-52 209.1 281 45.6
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 6.2e-52 208.8 257 47.1
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 1.1e-51 208.0 281 46.3
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 1.4e-51 207.6 278 45.0
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 1.4e-51 207.6 264 45.8
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 1.8e-51 207.2 293 44.0
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 3.1e-51 206.5 271 44.3
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 9.0e-51 204.9 279 46.6
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 9.0e-51 204.9 282 44.7
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 7.6e-50 201.8 219 53.0
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 1.3e-49 201.1 244 46.3
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.3e-49 201.1 244 46.3
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 1.3e-49 201.1 295 41.0
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 6.4e-49 198.7 243 46.5
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 9.3e-48 194.9 246 45.5
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 6.0e-47 192.2 288 41.0
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 6.0e-47 192.2 242 47.5
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 6.0e-47 192.2 278 41.4
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 7.9e-47 191.8 242 46.7
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 1.0e-46 191.4 239 47.7
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 5.1e-46 189.1 251 47.0
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 6.7e-46 188.7 233 47.6
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 8.7e-46 188.3 219 50.2
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 7.4e-45 185.3 246 45.1
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 3.7e-44 183.0 247 45.3
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 4.8e-44 182.6 265 43.4
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 4.8e-44 182.6 261 42.5
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 6.2e-44 182.2 286 41.6
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 2.4e-43 180.3 260 41.2
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 5.3e-43 179.1 209 49.3
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 6.9e-43 178.7 262 42.7
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 1.5e-42 177.6 261 42.5
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 4.5e-42 176.0 236 43.6
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 7.6e-42 175.3 248 44.4
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.0e-41 174.9 250 44.8
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 3.8e-41 172.9 260 39.2
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 6.5e-41 172.2 261 42.9
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 8.4e-41 171.8 241 43.6
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 1.4e-40 171.0 252 42.5
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 2.5e-40 170.2 241 43.2
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 4.2e-40 169.5 270 39.6
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 7.1e-40 168.7 264 42.4
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 1.2e-39 167.9 231 43.7
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 2.7e-39 166.8 262 42.7
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 1.3e-38 164.5 256 39.1
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 2.3e-38 163.7 260 39.2
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 5.7e-37 159.1 177 51.4
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 9.6e-37 158.3 295 39.3
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 2.1e-36 157.1 197 45.7
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 3.7e-36 156.4 261 39.8
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 1.1e-35 154.8 202 46.5
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 1.5e-34 151.0 248 40.3
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 9.3e-32 141.7 196 44.9
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 2.3e-30 137.1 169 46.7
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 2.8e-28 130.2 230 37.8
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 2.5e-24 117.1 110 53.6
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 4.1e-19 99.8 212 35.4
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 2.0e-13 80.9 109 44.0
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 5.7e-13 79.3 99 46.5
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 4.7e-07 59.7 95 40.0
HPP92_021873 Vanilla planifolia HOM05D002526 ORTHO05D010157 1.8e-06 57.8 221 28.1
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 5.2e-06 56.2 85 41.2
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 5.2e-06 56.2 95 37.9
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 5.2e-06 56.2 85 41.2
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 5.2e-06 56.2 84 41.7
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 5.2e-06 56.2 85 41.2


User provided reference genes

Program Settings