Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 3.5e-46 188.0 96 100.0
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 1.8e-18 95.9 85 61.2
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 1.2e-17 93.2 86 60.5
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 3.4e-17 91.7 68 70.6
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 2.2e-16 89.0 55 76.4
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 4.9e-16 87.8 55 74.5
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.9e-15 85.9 74 63.5
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 2.4e-15 85.5 63 69.8
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 2.4e-15 85.5 55 72.7
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 9.2e-15 83.6 67 68.7
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 1.6e-14 82.8 96 53.1
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.1e-14 82.4 84 56.0
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.1e-14 82.4 65 61.5
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 2.1e-14 82.4 65 61.5
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 2.1e-14 82.4 55 70.9
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 2.7e-14 82.0 59 69.5
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 2.7e-14 82.0 55 70.9
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 3.5e-14 81.6 61 68.9
HanXRQChr09g0276301 Helianthus annuus HOM05D008135 ORTHO05D010260 4.6e-14 81.3 59 69.5
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 6.0e-14 80.9 67 62.7
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 6.0e-14 80.9 77 58.4
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 1.0e-13 80.1 72 51.4
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 1.0e-13 80.1 54 70.4
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 1.7e-13 79.3 54 74.1
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 2.3e-13 79.0 48 79.2
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 3.9e-13 78.2 64 60.9
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 6.6e-13 77.4 61 65.6
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 1.1e-12 76.6 61 62.3
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 1.5e-12 76.3 50 78.0
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 1.9e-12 75.9 54 66.7
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 1.9e-12 75.9 48 72.9
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 2.5e-12 75.5 50 74.0
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 4.3e-12 74.7 54 66.7
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 4.3e-12 74.7 57 61.4
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 4.3e-12 74.7 49 71.4
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 5.6e-12 74.3 72 51.4
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 7.3e-12 73.9 59 62.7
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 9.6e-12 73.6 66 60.6
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.2e-11 73.2 66 60.6
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 1.2e-11 73.2 54 63.0
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 1.6e-11 72.8 48 70.8
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.6e-11 72.8 58 60.3
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 4.7e-11 71.2 79 54.4
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 4.7e-11 71.2 66 59.1
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 8.1e-11 70.5 58 60.3
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 1.4e-10 69.7 56 62.5
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.8e-10 69.3 55 61.8
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 1.8e-10 69.3 48 68.8
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.1e-10 68.6 67 58.2
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 3.1e-10 68.6 67 58.2
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 8.9e-10 67.0 49 65.3
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 1.5e-09 66.2 59 59.3
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 1.5e-09 66.2 55 61.8
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 4.4e-09 64.7 55 58.2
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 5.8e-09 64.3 55 56.4
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 7.6e-09 63.9 59 57.6
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 7.6e-09 63.9 66 51.5
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 1.7e-08 62.8 66 50.0
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 4.9e-08 61.2 56 51.8
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 6.4e-08 60.8 56 53.6
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 8.4e-08 60.5 54 57.4
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 1.1e-07 60.1 95 44.2
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 1.9e-07 59.3 58 53.4
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 5.4e-07 57.8 59 52.5
HPP92_005009 Vanilla planifolia HOM05D037031 ORTHO05D010260 4.6e-06 54.7 50 50.0
Carub.0003s2132 Capsella rubella HOM05D011376 ORTHO05D013452 7.8e-06 53.9 53 56.6


User provided reference genes

Program Settings