Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 3.6e-62 241.5 130 100.0
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 2.7e-49 198.7 122 86.1
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.2e-36 156.8 130 70.0
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 1.7e-32 142.9 124 62.9
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 3.0e-32 142.1 133 60.2
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 8.6e-32 140.6 132 60.6
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 8.6e-32 140.6 132 60.6
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 9.5e-31 137.1 124 62.9
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.6e-30 136.3 132 61.4
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 3.6e-30 135.2 108 65.7
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.8e-29 132.9 130 60.8
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.3e-29 132.5 133 59.4
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 4.0e-29 131.7 133 57.9
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 6.8e-29 131.0 124 57.3
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 2.0e-28 129.4 130 58.5
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 2.6e-28 129.0 130 58.5
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.6e-28 129.0 134 57.5
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 3.4e-28 128.6 125 62.4
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 4.4e-28 128.3 134 56.0
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 5.8e-28 127.9 133 57.9
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 5.8e-28 127.9 110 63.6
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 5.8e-28 127.9 133 57.9
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 5.8e-28 127.9 135 55.6
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 7.5e-28 127.5 101 62.4
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 9.9e-28 127.1 130 56.9
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 9.9e-28 127.1 130 59.2
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.3e-27 126.7 131 58.0
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 1.7e-27 126.3 133 57.1
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 2.9e-27 125.6 101 66.3
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.9e-27 125.6 133 56.4
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.9e-27 125.6 129 54.3
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 3.7e-27 125.2 134 57.5
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 6.4e-27 124.4 133 56.4
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 1.1e-26 123.6 132 57.6
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.4e-26 123.2 133 55.6
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.9e-26 122.9 137 52.6
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 1.9e-26 122.9 157 52.9
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 2.4e-26 122.5 133 54.1
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 2.4e-26 122.5 107 62.6
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 3.2e-26 122.1 108 62.0
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 4.1e-26 121.7 131 57.3
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 7.1e-26 120.9 133 56.4
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.2e-25 120.2 135 55.6
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.2e-25 120.2 131 53.4
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.6e-25 119.8 113 57.5
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.6e-25 119.8 122 59.0
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.6e-25 119.8 154 49.4
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 2.1e-25 119.4 135 55.6
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.1e-25 119.4 135 55.6
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 2.7e-25 119.0 133 54.9
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 3.5e-25 118.6 126 57.9
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 6.0e-25 117.9 131 53.4
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.0e-24 117.1 110 60.0
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 1.3e-24 116.7 103 65.0
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.7e-24 116.3 133 53.4
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.7e-24 116.3 131 54.2
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 2.3e-24 115.9 127 54.3
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.3e-24 115.9 135 54.8
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 3.0e-24 115.5 102 59.8
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 3.0e-24 115.5 78 75.6
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 3.0e-24 115.5 78 75.6
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 5.1e-24 114.8 162 46.9
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 6.6e-24 114.4 87 67.8
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 6.6e-24 114.4 130 52.3
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 8.6e-24 114.0 131 52.7
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.5e-23 113.2 81 69.1
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.5e-23 113.2 86 67.4
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 1.9e-23 112.8 137 55.5
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.9e-23 112.8 128 51.6
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 5.6e-23 111.3 77 75.3
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 7.3e-23 110.9 104 58.7
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 7.3e-23 110.9 101 59.4
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 1.6e-22 109.8 132 53.0
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 1.6e-22 109.8 127 53.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 2.1e-22 109.4 132 49.2
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 2.1e-22 109.4 132 49.2
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 2.1e-22 109.4 130 50.0
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 2.8e-22 109.0 102 58.8
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 3.6e-22 108.6 133 50.4
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 8.1e-22 107.5 132 48.5
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 8.1e-22 107.5 132 48.5
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 8.1e-22 107.5 132 48.5
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 8.1e-22 107.5 132 48.5
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.1e-21 107.1 131 50.4
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 1.1e-21 107.1 143 53.1
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 1.1e-21 107.1 130 49.2
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 5.2e-21 104.8 104 54.8
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 6.8e-21 104.4 132 47.7
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 6.8e-21 104.4 112 52.7
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 1.3e-19 100.1 130 46.9
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 1.3e-19 100.1 133 45.9
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 1.7e-19 99.8 130 46.2
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.7e-19 99.8 133 45.9
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 2.2e-19 99.4 130 46.9
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 2.9e-19 99.0 130 44.6
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 8.4e-19 97.4 134 50.0
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 8.4e-19 97.4 78 64.1
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 9.2e-18 94.0 131 46.6
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.2e-17 93.6 82 56.1
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 4.6e-17 91.7 111 50.5
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 1.0e-16 90.5 130 45.4
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 1.7e-16 89.7 120 44.2
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 3.0e-16 89.0 130 44.6
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.3e-14 83.6 132 43.9
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 4.8e-14 81.6 114 46.5
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.4e-13 80.1 70 54.3
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 6.4e-11 71.2 132 38.6
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.4e-10 69.3 80 50.0
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.7e-08 60.8 110 39.1
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 1.1e-07 60.5 125 36.8
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 4.3e-07 58.5 131 33.6


User provided reference genes

Program Settings