Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 9.1e-147 523.5 249 100.0
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 9.7e-125 450.3 249 82.3
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 6.8e-118 427.6 248 78.6
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.6e-114 416.4 249 76.3
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 2.3e-105 386.0 250 70.0
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 1.5e-104 383.3 250 69.6
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 1.9e-104 382.9 249 68.3
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 5.6e-104 381.3 250 71.2
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 2.8e-103 379.0 250 69.6
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 2.8e-103 379.0 250 68.4
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 6.1e-103 377.9 250 69.2
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.0e-102 377.1 250 68.0
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 1.0e-102 377.1 250 68.0
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 2.3e-102 375.9 250 69.6
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 2.3e-102 375.9 248 69.0
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 3.0e-102 375.6 249 67.9
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 5.2e-102 374.8 251 68.9
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 8.9e-102 374.0 250 67.6
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 2.0e-101 372.9 250 67.6
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 2.6e-101 372.5 251 68.1
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 3.4e-101 372.1 250 67.2
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.4e-101 372.1 250 67.2
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 5.7e-101 371.3 250 67.2
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 9.8e-101 370.5 251 68.9
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.2e-100 369.4 250 66.8
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 2.2e-100 369.4 251 66.9
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 2.9e-100 369.0 250 65.6
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 3.7e-100 368.6 251 66.9
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 4.9e-100 368.2 251 66.9
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 6.4e-100 367.9 251 66.9
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 1.4e-99 366.7 250 67.2
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.8e-99 366.3 250 66.4
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 3.2e-99 365.5 250 66.4
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 3.2e-99 365.5 250 68.4
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 5.4e-99 364.8 250 65.6
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 9.2e-99 364.0 251 66.1
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 9.2e-99 364.0 250 66.8
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 9.2e-99 364.0 251 66.1
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 2.7e-98 362.5 250 67.6
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 3.5e-98 362.1 251 66.9
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.0e-97 360.5 250 67.2
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 1.7e-97 359.8 250 65.6
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 5.0e-97 358.2 250 65.6
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 6.6e-97 357.8 250 65.2
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 6.6e-97 357.8 252 67.1
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 6.6e-97 357.8 250 66.0
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 8.6e-97 357.5 252 66.3
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 1.1e-96 357.1 253 66.0
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.5e-96 355.9 250 64.8
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 2.5e-96 355.9 250 65.6
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 3.3e-96 355.5 250 66.4
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 3.3e-96 355.5 252 63.9
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 4.3e-96 355.1 250 66.8
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 5.6e-96 354.8 249 63.1
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 7.3e-96 354.4 251 65.3
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.6e-95 353.2 250 64.4
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 2.1e-95 352.8 252 65.9
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 3.6e-95 352.1 252 65.5
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 8.0e-95 350.9 250 65.2
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 1.4e-94 350.1 250 62.8
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 1.8e-94 349.7 254 65.0
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 1.8e-94 349.7 252 65.1
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 2.3e-94 349.4 250 64.4
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 3.1e-94 349.0 250 65.2
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 2.0e-93 346.3 250 64.0
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 2.0e-93 346.3 252 64.3
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.0e-93 346.3 250 62.8
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 2.9e-92 342.4 252 63.9
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 4.1e-91 338.6 252 62.7
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 7.0e-91 337.8 250 63.2
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 7.0e-91 337.8 251 62.5
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.2e-90 337.0 246 65.4
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 2.0e-90 336.3 250 63.6
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 4.6e-90 335.1 252 61.9
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 3.0e-89 332.4 246 65.0
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 1.1e-88 330.5 253 60.5
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 1.1e-88 330.5 250 63.2
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 2.5e-88 329.3 250 61.2
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 5.6e-88 328.2 251 60.2
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 7.3e-88 327.8 252 59.9
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 9.5e-88 327.4 252 60.3
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 1.6e-87 326.6 252 60.3
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 6.2e-87 324.7 251 60.2
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 4.4e-85 318.5 252 57.9
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 4.4e-85 318.5 252 57.9
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 4.4e-85 318.5 252 57.9
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 4.4e-85 318.5 252 57.9
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 5.8e-85 318.2 252 57.9
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 5.8e-85 318.2 228 63.6
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 7.5e-85 317.8 249 59.4
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 2.2e-84 316.2 252 57.1
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 1.1e-83 313.9 252 57.5
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 1.4e-83 313.5 252 56.7
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 1.9e-83 313.2 240 58.3
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 2.4e-83 312.8 252 56.7
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 2.4e-83 312.8 262 59.2
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 2.7e-82 309.3 239 60.7
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 3.5e-82 308.9 250 57.6
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 2.6e-77 292.7 246 56.5
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 4.4e-77 292.0 249 55.8
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 2.9e-76 289.3 247 54.7
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 5.4e-75 285.0 247 53.8
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 7.8e-74 281.2 203 60.1
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 6.9e-70 268.1 250 52.0
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.1e-64 250.8 250 46.8
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 5.3e-62 241.9 258 52.7
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.9e-59 233.4 249 44.6
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.5e-56 223.8 267 41.6
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.5e-56 223.0 154 62.3
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 4.9e-52 208.8 286 45.1
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 3.3e-48 196.1 139 65.5
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 5.3e-46 188.7 112 75.0
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 6.5e-36 155.2 99 74.7
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 5.0e-28 129.0 95 62.1
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 6.5e-20 102.1 72 56.9
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 1.9e-19 100.5 100 54.0
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 3.2e-19 99.8 152 42.1
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 2.3e-17 93.6 54 74.1
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 3.1e-14 83.2 49 67.3
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 4.1e-14 82.8 45 75.6
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.8e-09 67.4 182 26.4
MBI19_g17527_MAGBIO Magnolia biondii HOM05D007529 ORTHO05D007451 7.5e-08 62.0 112 33.9
unitig_899.g15088 Utricularia gibba HOM05D007529 ORTHO05D007451 4.8e-07 59.3 95 34.7


User provided reference genes

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