Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 2.3e-88 329.3 230 100.0
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 2.5e-74 282.7 159 88.1
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.6e-73 280.0 234 75.6
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 8.3e-70 267.7 159 83.0
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.7e-67 260.0 146 89.0
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.9e-67 259.2 150 83.3
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 5.0e-67 258.5 149 85.2
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 6.6e-67 258.1 154 83.1
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 4.2e-66 255.4 160 81.2
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 9.5e-66 254.2 145 86.2
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 1.2e-65 253.8 159 78.6
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.1e-65 253.1 150 80.7
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 2.8e-65 252.7 150 82.0
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 3.6e-65 252.3 145 84.8
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 3.6e-65 252.3 145 86.9
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 3.6e-65 252.3 150 81.3
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 3.6e-65 252.3 150 82.0
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 4.7e-65 251.9 151 80.8
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 4.7e-65 251.9 151 80.8
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 6.1e-65 251.5 155 80.6
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.0e-64 250.8 230 69.6
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 1.0e-64 250.8 159 78.6
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.4e-64 250.4 147 82.3
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 1.4e-64 250.4 145 84.1
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.8e-64 250.0 150 81.3
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.8e-64 250.0 150 81.3
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 2.3e-64 249.6 147 85.7
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 2.3e-64 249.6 153 81.0
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 2.3e-64 249.6 150 81.3
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 2.3e-64 249.6 147 81.6
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 3.0e-64 249.2 148 82.4
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 5.2e-64 248.4 153 81.7
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 6.8e-64 248.1 150 80.7
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 6.8e-64 248.1 147 81.0
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 6.8e-64 248.1 147 81.0
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 8.9e-64 247.7 147 80.3
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 1.2e-63 247.3 145 83.4
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 1.2e-63 247.3 145 83.4
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.2e-63 247.3 145 83.4
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 1.5e-63 246.9 158 77.8
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 1.5e-63 246.9 151 80.8
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 1.5e-63 246.9 251 66.5
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 2.0e-63 246.5 145 83.4
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.0e-63 246.5 147 80.3
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.0e-63 246.5 155 77.4
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 2.0e-63 246.5 146 80.8
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 4.4e-63 245.4 159 79.2
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 9.8e-63 244.2 153 79.7
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.3e-62 243.8 151 80.8
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 1.7e-62 243.4 160 78.8
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 2.8e-62 242.7 147 81.0
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 2.8e-62 242.7 149 79.9
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 3.7e-62 242.3 142 84.5
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 3.7e-62 242.3 147 80.3
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 4.9e-62 241.9 150 80.0
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 6.3e-62 241.5 151 80.1
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 6.3e-62 241.5 145 82.1
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.1e-61 240.7 153 78.4
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 1.4e-61 240.4 134 86.6
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 2.4e-61 239.6 152 80.3
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 2.4e-61 239.6 147 79.6
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 1.6e-60 236.9 149 77.9
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 3.5e-60 235.7 148 79.1
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 3.5e-60 235.7 155 78.1
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 4.5e-60 235.3 146 77.4
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 4.5e-60 235.3 146 77.4
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 5.9e-60 235.0 146 77.4
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 1.3e-59 233.8 147 77.6
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 2.3e-59 233.0 155 73.5
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 3.9e-59 232.3 132 85.6
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 5.0e-59 231.9 133 85.0
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 8.6e-59 231.1 153 73.2
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 8.6e-59 231.1 138 81.9
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 1.9e-58 229.9 146 76.0
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 1.9e-58 229.9 153 73.9
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 2.5e-58 229.6 149 77.2
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 3.3e-58 229.2 160 72.5
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 3.3e-58 229.2 144 77.1
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 4.3e-58 228.8 130 85.4
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 9.5e-58 227.6 153 71.2
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 9.5e-58 227.6 153 71.2
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.6e-57 226.9 153 71.2
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.6e-57 226.9 153 71.2
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 2.1e-57 226.5 152 75.0
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 1.0e-56 224.2 135 79.3
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 1.3e-54 217.2 218 53.7
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 3.7e-54 215.7 150 71.3
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 2.7e-52 209.5 142 76.8
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 3.3e-50 202.6 141 72.3
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 6.4e-46 188.3 139 69.1
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 2.4e-45 186.4 132 68.9
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 6.0e-44 181.8 139 69.1
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 5.1e-43 178.7 136 63.2
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 1.8e-40 170.2 91 87.9
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 1.2e-39 167.5 104 81.7
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 3.4e-39 166.0 145 59.3
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 3.7e-38 162.5 102 83.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.5e-34 150.6 149 57.7
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 4.3e-34 149.1 113 71.7
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 1.8e-32 143.7 159 51.6
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 1.5e-31 140.6 100 78.0
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 1.5e-31 140.6 100 78.0
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 6.0e-28 128.6 131 55.7
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 1.1e-26 124.4 164 46.3
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.1e-24 116.3 86 72.1
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 6.0e-20 102.1 65 81.5
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.3e-19 100.9 58 86.2
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 2.5e-18 96.7 75 69.3
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 4.8e-17 92.4 108 44.4
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 1.4e-16 90.9 55 81.8
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 2.5e-10 70.1 37 89.2
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 8.1e-09 65.1 31 83.9
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 1.8e-08 63.9 58 58.6
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 5.3e-08 62.4 52 69.2
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 6.9e-08 62.0 31 77.4


User provided reference genes

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