Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 3.1e-108 395.2 205 100.0
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 1.0e-39 167.5 173 57.2
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 4.4e-38 162.2 215 46.0
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 4.2e-33 145.6 139 53.2
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 7.5e-30 134.8 197 44.2
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 3.7e-29 132.5 202 41.6
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 3.7e-29 132.5 202 43.6
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 5.3e-28 128.6 197 42.1
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 3.5e-27 125.9 195 42.6
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 6.5e-26 121.7 203 39.9
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 5.5e-25 118.6 197 39.6
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 3.0e-23 112.8 194 38.7
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 4.0e-23 112.5 192 39.1
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 2.0e-22 110.2 196 39.3
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 9.8e-22 107.8 129 51.2
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 9.8e-22 107.8 190 37.9
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 1.7e-21 107.1 194 39.2
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 2.2e-21 106.7 214 37.4
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 2.2e-21 106.7 173 39.3
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 2.2e-21 106.7 139 43.2
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 6.3e-21 105.1 199 35.7
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 1.1e-20 104.4 212 36.3
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 2.4e-20 103.2 161 42.2
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 4.1e-20 102.4 176 39.2
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 7.0e-20 101.7 165 38.8
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 7.0e-20 101.7 170 41.2
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 7.0e-20 101.7 104 51.0
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 9.1e-20 101.3 198 37.4
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.0e-19 100.1 167 38.3
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 3.5e-19 99.4 208 35.6
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 4.5e-19 99.0 148 39.9
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.3e-18 97.4 188 40.4
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 1.7e-18 97.1 256 32.0
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 3.8e-18 95.9 165 40.6
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 3.8e-18 95.9 155 38.7
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 1.1e-17 94.4 258 31.4
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 1.5e-17 94.0 175 40.0
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 5.5e-17 92.0 175 36.6
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 7.2e-17 91.7 188 36.2
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.2e-16 90.9 137 40.9
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 1.2e-16 90.9 137 40.9
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 1.2e-16 90.9 272 29.4
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.6e-16 90.5 137 40.9
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 6.1e-16 88.6 190 35.3
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 2.3e-15 86.7 159 35.2
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 2.3e-15 86.7 182 35.7
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 2.3e-15 86.7 182 35.7
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.0e-15 85.9 182 34.6
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 4.0e-15 85.9 179 36.3
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 6.8e-15 85.1 144 38.9
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 6.8e-15 85.1 158 38.0
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 7.5e-14 81.6 185 35.7
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 9.8e-14 81.3 196 31.1
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 3.7e-13 79.3 71 54.9
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 1.1e-12 77.8 278 27.3
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 4.1e-12 75.9 126 39.7
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 5.4e-12 75.5 121 38.8
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 2.0e-11 73.6 201 31.3
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 4.5e-11 72.4 117 38.5
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 2.3e-10 70.1 145 33.8
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 2.9e-10 69.7 117 37.6
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 1.1e-09 67.8 117 38.5
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 1.1e-09 67.8 138 33.3
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 3.3e-09 66.2 72 48.6
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 3.6e-08 62.8 182 27.5
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 6.1e-08 62.0 191 25.7
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 6.1e-08 62.0 191 25.7
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 1.0e-07 61.2 84 36.9
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 2.3e-07 60.1 180 23.3
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 2.3e-07 60.1 170 30.0
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 3.0e-07 59.7 177 27.7
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 3.0e-07 59.7 199 28.1
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 4.0e-07 59.3 175 30.9
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 4.0e-07 59.3 222 24.3
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 8.9e-07 58.2 174 25.9
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 1.2e-06 57.8 193 26.9
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.0e-06 57.0 183 26.2
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 2.0e-06 57.0 174 24.1
Os08g0477800 Oryza sativa ssp. japonica HOM05D008012 ORTHO05D010154 2.6e-06 56.6 164 33.5
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 5.7e-06 55.5 179 27.4
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 5.7e-06 55.5 204 29.4
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 9.8e-06 54.7 166 27.7


User provided reference genes

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