Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 8.4e-106 387.1 206 100.0
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 3.0e-79 298.9 205 75.1
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.5e-62 243.4 220 62.7
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 1.4e-55 220.3 203 56.7
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 2.3e-55 219.5 204 57.8
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 6.7e-55 218.0 204 55.9
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 1.5e-54 216.9 205 55.6
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.5e-54 216.9 204 55.4
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 1.7e-53 213.4 204 52.9
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.7e-53 212.2 201 56.2
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 5.3e-52 208.4 205 54.6
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 7.0e-52 208.0 204 53.4
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 9.1e-52 207.6 203 53.2
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 9.1e-52 207.6 201 53.2
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 5.0e-50 201.8 201 54.2
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 1.6e-48 196.8 204 51.5
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 1.6e-48 196.8 204 52.0
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.8e-47 193.4 200 50.5
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 3.0e-47 192.6 205 50.2
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 5.2e-47 191.8 217 49.3
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 2.0e-46 189.9 203 49.8
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 3.3e-46 189.1 201 51.2
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 5.7e-46 188.3 201 51.7
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 2.2e-45 186.4 203 49.3
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 1.4e-44 183.7 204 45.6
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 5.3e-44 181.8 204 48.5
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 3.5e-43 179.1 204 48.5
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.3e-42 177.2 172 52.3
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 3.8e-42 175.6 176 52.3
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 6.5e-42 174.9 204 45.6
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 1.5e-41 173.7 197 47.2
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 1.5e-41 173.7 204 45.1
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 2.5e-41 172.9 204 45.6
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 2.5e-41 172.9 176 50.0
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 3.2e-41 172.6 178 49.4
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 3.2e-41 172.6 172 50.6
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 7.2e-41 171.4 203 46.3
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 1.2e-40 170.6 176 50.0
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 1.2e-40 170.6 176 50.0
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 2.1e-40 169.9 168 54.8
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.0e-39 167.5 172 51.7
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 4.0e-39 165.6 203 45.3
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 3.4e-38 162.5 231 42.0
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 4.4e-38 162.2 203 47.3
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 5.7e-38 161.8 203 45.3
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 9.8e-38 161.0 204 46.1
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 2.0e-35 153.3 204 45.1
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 3.5e-35 152.5 178 46.1
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 3.5e-35 152.5 201 45.3
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 1.7e-34 150.2 162 48.8
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 2.3e-34 149.8 179 47.5
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 3.8e-34 149.1 193 45.1
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 6.5e-34 148.3 205 44.4
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 5.5e-33 145.2 162 44.4
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 1.6e-32 143.7 168 47.0
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 3.6e-32 142.5 238 38.7
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 1.8e-31 140.2 162 43.8
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 1.2e-30 137.5 181 43.1
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.3e-29 134.0 175 43.4
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 1.2e-27 127.5 110 62.7
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 1.0e-26 124.4 106 62.3
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 1.3e-26 124.0 195 40.5
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 6.6e-26 121.7 162 41.4
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.3e-25 119.4 162 40.7
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 3.3e-25 119.4 106 56.6
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 1.6e-24 117.1 172 41.3
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 6.1e-24 115.2 167 38.9
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 2.3e-23 113.2 162 37.7
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 2.3e-23 113.2 162 37.7
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 2.3e-23 113.2 162 37.7
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 3.0e-23 112.8 167 37.1
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 5.2e-23 112.1 195 38.5
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 2.0e-22 110.2 162 37.7
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 2.0e-22 110.2 162 37.7
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.0e-22 110.2 95 55.8
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.0e-22 110.2 95 55.8
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 2.6e-22 109.8 269 33.1
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 5.8e-22 108.6 126 47.6
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.1e-20 104.4 73 71.2
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 1.1e-20 104.4 73 71.2
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 7.8e-19 98.2 167 35.9
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 1.0e-18 97.8 58 86.2
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 9.5e-17 91.3 104 48.1
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 2.6e-14 83.2 70 61.4
Sabra15G0078100 Salix brachista HOM05D007696 ORTHO05D009719 2.0e-11 73.6 102 41.2
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 7.8e-11 71.6 105 38.1
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 1.2e-08 64.3 62 54.8


User provided reference genes

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