Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.1e-105 386.7 199 100.0
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 2.2e-42 176.4 216 50.9
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 2.5e-38 162.9 180 54.4
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 6.1e-37 158.3 188 51.6
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.0e-36 157.5 202 51.5
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 2.6e-27 126.3 143 51.7
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.6e-21 107.1 178 45.5
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.7e-16 89.7 199 36.2
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 1.0e-15 87.8 201 35.8
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.0e-15 87.8 207 36.2
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.3e-15 87.4 195 37.9
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.7e-15 87.0 204 36.3
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 3.9e-15 85.9 180 41.1
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 6.6e-15 85.1 214 35.0
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.5e-14 83.2 198 35.4
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 2.5e-14 83.2 183 36.1
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 2.8e-13 79.7 214 33.2
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 1.1e-12 77.8 177 37.3
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 1.4e-12 77.4 197 34.5
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.8e-12 77.0 197 34.5
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 3.1e-12 76.3 169 37.3
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 3.1e-12 76.3 172 37.8
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 8.9e-12 74.7 165 37.0
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 8.9e-12 74.7 154 39.0
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.2e-11 74.3 175 36.0
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.2e-11 74.3 165 39.4
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.5e-11 73.9 183 36.1
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.0e-11 73.6 203 34.5
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 2.6e-11 73.2 171 36.3
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 2.6e-11 73.2 197 33.0
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 3.4e-11 72.8 165 36.4
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 5.8e-11 72.0 223 32.3
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 5.8e-11 72.0 195 32.8
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 9.8e-11 71.2 178 34.8
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 1.7e-10 70.5 200 32.0
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.7e-10 70.5 193 33.2
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 2.2e-10 70.1 168 35.1
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.2e-10 70.1 195 31.3
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 2.9e-10 69.7 167 38.3
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 4.9e-10 68.9 122 41.0
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 6.4e-10 68.6 203 33.5
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 6.4e-10 68.6 182 31.9
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 1.1e-09 67.8 171 33.9
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 1.9e-09 67.0 196 33.2
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 2.4e-09 66.6 167 32.9
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 2.4e-09 66.6 167 32.9
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 3.2e-09 66.2 203 34.5
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.4e-09 65.5 167 33.5
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 5.4e-09 65.5 172 34.3
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 7.0e-09 65.1 167 33.5
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 7.0e-09 65.1 84 46.4
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 9.2e-09 64.7 174 34.5
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 1.2e-08 64.3 185 33.5
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.6e-08 63.9 193 34.2
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 1.6e-08 63.9 180 31.1
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 2.0e-08 63.5 175 33.7
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 2.0e-08 63.5 176 31.8
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 2.7e-08 63.2 167 32.3
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.7e-08 63.2 174 32.8
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.7e-08 63.2 174 33.9
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 2.7e-08 63.2 168 32.7
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 4.6e-08 62.4 88 46.6
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 7.8e-08 61.6 192 31.2
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 7.8e-08 61.6 86 41.9
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 1.0e-07 61.2 167 33.5
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.3e-07 60.8 67 44.8
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 2.3e-07 60.1 103 42.7
Oeu021446.1 Olea europaea HOM05D005432 ORTHO05D004599 2.3e-07 60.1 173 32.9
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.9e-07 59.3 86 40.7
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.9e-07 59.3 97 39.2
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 3.9e-07 59.3 86 40.7
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 5.0e-07 58.9 73 43.8
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 6.6e-07 58.5 177 30.5
TPR.G24244 Trifolium pratense HOM05D005432 ORTHO05D004599 6.6e-07 58.5 85 47.1
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 8.6e-07 58.2 89 41.6
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.1e-06 57.8 169 32.0
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 2.5e-06 56.6 91 44.0
Nn6g34511 Nelumbo nucifera HOM05D005432 ORTHO05D004599 4.3e-06 55.8 152 33.6
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 7.3e-06 55.1 199 30.7
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 9.5e-06 54.7 174 32.2
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 9.5e-06 54.7 200 30.5
TPR.G24220 Trifolium pratense HOM05D005432 ORTHO05D004599 9.5e-06 54.7 89 43.8


User provided reference genes

Program Settings