Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 2.2e-120 435.6 219 100.0
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 1.3e-69 266.9 131 97.7
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 1.8e-69 266.5 132 97.7
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 5.1e-69 265.0 132 96.2
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 2.1e-67 259.6 132 94.7
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 6.2e-67 258.1 132 93.2
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 8.1e-67 257.7 132 92.4
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 1.4e-66 256.9 132 92.4
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 1.8e-66 256.5 132 90.9
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 3.1e-66 255.8 132 91.7
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 4.0e-66 255.4 132 91.7
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 5.3e-66 255.0 132 90.9
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 6.9e-66 254.6 132 91.7
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 6.9e-66 254.6 131 91.6
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 9.0e-66 254.2 133 89.5
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 9.0e-66 254.2 131 91.6
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 9.0e-66 254.2 132 90.2
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 1.2e-65 253.8 131 90.8
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 2.0e-65 253.1 132 91.7
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.0e-65 253.1 131 90.1
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 2.0e-65 253.1 131 90.8
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 2.0e-65 253.1 132 90.2
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 3.4e-65 252.3 132 89.4
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 3.4e-65 252.3 129 93.0
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 89.4
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 89.4
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 89.4
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 90.9
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 90.9
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 88.6
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 7.6e-65 251.1 132 88.6
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 1.0e-64 250.8 132 88.6
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.3e-64 250.4 132 87.9
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 2.2e-64 249.6 132 88.6
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.2e-64 249.6 132 87.9
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 3.8e-64 248.8 131 89.3
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 4.9e-64 248.4 131 88.5
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 4.9e-64 248.4 132 88.6
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 6.5e-64 248.1 132 88.6
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 86.4
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 87.9
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 88.6
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 88.6
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 88.6
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 88.6
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 87.1
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 87.1
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 87.1
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 88.6
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 8.4e-64 247.7 132 87.9
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.1e-63 247.3 132 87.1
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 1.9e-63 246.5 133 87.2
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.9e-63 246.5 130 87.7
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 3.2e-63 245.7 132 87.1
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 4.2e-63 245.4 132 83.3
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 1.6e-62 243.4 133 85.0
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 2.1e-62 243.0 131 87.8
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 2.7e-62 242.7 132 85.6
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 4.6e-62 241.9 132 85.6
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 6.0e-62 241.5 132 86.4
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 1.0e-61 240.7 132 85.6
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 1.3e-61 240.4 132 84.1
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 1.3e-61 240.4 132 84.1
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 1.3e-61 240.4 132 84.1
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 1.3e-61 240.4 132 84.1
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 2.3e-61 239.6 132 83.3
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 3.0e-61 239.2 132 83.3
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 3.0e-61 239.2 132 83.3
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 3.0e-61 239.2 132 84.1
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 3.9e-61 238.8 132 85.6
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 3.9e-61 238.8 133 82.0
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 3.9e-61 238.8 132 83.3
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 1.9e-60 236.5 133 84.2
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 2.5e-60 236.1 133 83.5
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 3.3e-60 235.7 133 84.2
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 4.3e-60 235.3 133 82.7
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 5.7e-60 235.0 133 82.7
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 5.7e-60 235.0 133 82.7
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 5.7e-60 235.0 138 79.7
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 5.7e-60 235.0 133 82.7
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 7.4e-60 234.6 133 84.2
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 7.4e-60 234.6 132 85.6
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 7.4e-60 234.6 133 82.7
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 1.6e-59 233.4 133 82.0
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 1.6e-59 233.4 133 81.2
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 2.1e-59 233.0 120 90.8
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 3.7e-59 232.3 135 82.2
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 3.7e-59 232.3 133 81.2
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 2.4e-58 229.6 120 91.7
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 3.1e-58 229.2 120 92.5
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 2.0e-57 226.5 126 86.5
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 3.4e-57 225.7 127 85.0
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 5.9e-57 224.9 125 84.0
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.0e-56 224.2 120 87.5
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 1.7e-56 223.4 115 92.2
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 5.0e-56 221.9 120 86.7
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 8.5e-56 221.1 120 85.0
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 8.5e-56 221.1 139 74.1
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.5e-55 219.5 130 78.5
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 5.5e-55 218.4 141 70.2
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 7.2e-55 218.0 134 77.6
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 2.1e-54 216.5 134 77.6
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 2.7e-54 216.1 120 89.2
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 1.3e-53 213.8 129 78.3
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.8e-53 213.4 131 75.6
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 4.3e-52 208.8 202 55.0
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 6.9e-50 201.4 131 71.0
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 1.5e-49 200.3 131 70.2
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 2.6e-49 199.5 132 72.7
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 8.5e-48 194.5 116 79.3
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 3.6e-46 189.1 117 78.6
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.4e-45 187.2 132 66.7
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 1.8e-45 186.8 130 66.9
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 8.8e-45 184.5 151 62.3
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 6.9e-42 174.9 128 63.3
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 1.0e-40 171.0 92 87.0
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 5.2e-37 158.7 121 68.6
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 1.1e-34 151.0 89 77.5
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 1.4e-34 150.6 72 94.4
ECA240G0369 Erigeron canadensis HOM05D006295 ORTHO05D000080 2.4e-34 149.8 83 92.8
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 4.1e-34 149.1 71 94.4
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 1.6e-33 147.1 87 81.6
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 1.7e-32 143.7 70 91.4
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 1.7e-32 143.7 70 91.4
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 3.8e-32 142.5 71 88.7
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 2.5e-31 139.8 70 90.0
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 5.5e-31 138.7 70 85.7
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 5.5e-31 138.7 70 85.7
ECA240G0602 Erigeron canadensis HOM05D006295 ORTHO05D008061 7.2e-31 138.3 75 93.3
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.0e-28 130.2 69 84.1
ECA233G2875 Erigeron canadensis HOM05D001533 ORTHO05D003743 3.3e-28 129.4 87 78.2
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 4.1e-26 122.5 140 52.1
ECA234G4479 Erigeron canadensis HOM05D006295 ORTHO05D008061 7.0e-26 121.7 87 73.6
ECA233G5825 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.0e-25 120.2 66 90.9
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 2.0e-25 120.2 72 79.2
ECA238G2436 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.7e-25 119.8 69 88.4
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 3.8e-24 115.9 133 42.1
Sopen11g008620 Solanum pennellii HOM05D000147 ORTHO05D004360 5.0e-24 115.5 72 80.6
ECA232G0270 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.1e-23 114.4 87 70.1
ECA248G0717 Erigeron canadensis HOM05D006295 ORTHO05D008061 6.1e-22 108.6 87 64.4
ECA240G4624 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.0e-20 103.6 63 85.7
ECA238G3734 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.4e-18 96.7 69 69.6
PRCOL_00003843 Prasinoderma coloniale HOM05D005489 ORTHO05D006629 1.6e-17 94.0 117 46.2
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 1.1e-15 87.8 161 42.2
ECA232G4639 Erigeron canadensis HOM05D000131 ORTHO05D000086 3.2e-15 86.3 52 90.4
ClCG03G009140 Citrullus lanatus HOM05D005489 ORTHO05D006629 4.2e-15 85.9 67 67.2
Cre03.g159300 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 9.5e-15 84.7 126 39.7
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 8.0e-14 81.6 43 83.7
Solyc11g013660.1 Solanum lycopersicum HOM05D005489 ORTHO05D006629 6.3e-11 72.0 70 58.6
ECA233G2094 Erigeron canadensis HOM05D003174 ORTHO05D003439 9.2e-10 68.2 43 79.1
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 2.0e-09 67.0 31 90.3
Os08g0469200 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 5.9e-09 65.5 67 52.2
PRCOL_00003098 Prasinoderma coloniale HOM05D001685 ORTHO05D007488 2.9e-08 63.2 132 33.3
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 8.6e-08 61.6 51 62.7
ECA236G1542 Erigeron canadensis HOM05D006295 ORTHO05D008061 4.3e-07 59.3 51 62.7
ECA247G1642 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.2e-06 57.8 85 37.6
ECA240G3523 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.6e-06 57.4 85 37.6
ECA238G2222 Erigeron canadensis HOM05D006295 ORTHO05D008061 2.1e-06 57.0 85 37.6


User provided reference genes

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