Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 4.0e-37 157.5 77 100.0
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 5.8e-28 127.1 66 92.4
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 6.5e-27 123.6 77 79.2
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 6.5e-27 123.6 77 76.6
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 8.4e-27 123.2 65 87.7
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 2.5e-26 121.7 77 75.3
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 3.2e-26 121.3 65 87.7
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 7.1e-26 120.2 66 81.8
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 7.1e-26 120.2 65 86.2
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 9.3e-26 119.8 74 77.0
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 9.3e-26 119.8 65 84.6
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 1.2e-25 119.4 68 82.4
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 1.2e-25 119.4 74 78.4
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.2e-25 119.4 59 91.5
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.2e-25 119.4 59 91.5
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.2e-25 119.4 59 91.5
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.2e-25 119.4 59 91.5
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 1.6e-25 119.0 74 78.4
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 2.1e-25 118.6 67 82.1
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 2.1e-25 118.6 66 80.3
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 2.7e-25 118.2 63 84.1
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.5e-25 117.9 76 76.3
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.5e-25 117.9 66 83.3
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 4.6e-25 117.5 71 78.9
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 6.0e-25 117.1 66 83.3
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 7.9e-25 116.7 75 76.0
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 7.9e-25 116.7 66 81.8
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 1.0e-24 116.3 58 91.4
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 1.0e-24 116.3 77 74.0
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 1.3e-24 115.9 61 86.9
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 1.3e-24 115.9 65 83.1
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 1.3e-24 115.9 66 80.3
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 1.3e-24 115.9 79 73.4
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 1.3e-24 115.9 63 79.4
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 1.8e-24 115.5 63 82.5
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 1.8e-24 115.5 66 80.3
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 1.8e-24 115.5 65 83.1
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 1.8e-24 115.5 75 74.7
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 2.3e-24 115.2 59 89.8
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 2.3e-24 115.2 74 75.7
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 2.3e-24 115.2 75 74.7
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 2.3e-24 115.2 73 74.0
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 2.3e-24 115.2 65 80.0
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 3.9e-24 114.4 77 74.0
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 3.9e-24 114.4 59 91.5
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 3.9e-24 114.4 75 74.7
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 5.1e-24 114.0 77 68.8
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 5.1e-24 114.0 77 68.8
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 6.7e-24 113.6 73 74.0
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 6.7e-24 113.6 76 72.4
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 1.1e-23 112.8 66 80.3
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 2.5e-23 111.7 65 80.0
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 3.3e-23 111.3 72 76.4
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 3.3e-23 111.3 59 86.4
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 3.3e-23 111.3 66 80.3
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 5.7e-23 110.5 65 80.0
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 7.4e-23 110.2 65 78.5
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 1.3e-22 109.4 55 89.1
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 1.6e-22 109.0 71 76.1
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 4.8e-22 107.5 65 78.5
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 6.3e-22 107.1 59 84.7
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 8.2e-22 106.7 54 90.7
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 8.2e-22 106.7 57 86.0
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 1.4e-21 105.9 75 68.0
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 2.4e-21 105.1 68 75.0
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 2.4e-21 105.1 56 87.5
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 2.4e-21 105.1 67 76.1
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 4.1e-21 104.4 70 72.9
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 4.1e-21 104.4 101 56.4
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 5.3e-21 104.0 74 70.3
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 6.9e-21 103.6 55 85.5
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 9.0e-21 103.2 55 87.3
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 9.0e-21 103.2 74 66.2
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 1.2e-20 102.8 74 64.9
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 1.2e-20 102.8 64 76.6
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.5e-20 102.4 53 88.7
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 2.0e-20 102.1 53 86.8
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 2.0e-20 102.1 53 86.8
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 2.0e-20 102.1 53 86.8
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 2.0e-20 102.1 53 86.8
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 2.0e-20 102.1 75 66.7
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 3.4e-20 101.3 76 65.8
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 4.5e-20 100.9 74 64.9
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 4.5e-20 100.9 53 84.9
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 4.5e-20 100.9 53 84.9
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 4.5e-20 100.9 53 84.9
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 4.5e-20 100.9 53 84.9
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 1.0e-19 99.8 55 83.6
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 1.7e-19 99.0 72 70.8
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 3.8e-19 97.8 68 72.1
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 5.0e-19 97.4 71 71.8
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 1.1e-18 96.3 100 53.0
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.1e-18 96.3 75 58.7
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 9.3e-18 93.2 75 57.3
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.6e-17 92.4 61 72.1
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 3.6e-17 91.3 44 93.2
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 1.0e-16 89.7 49 83.7
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 1.8e-16 89.0 45 88.9
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 2.3e-16 88.6 54 72.2
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 3.0e-16 88.2 63 68.3
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 5.1e-16 87.4 42 92.9
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 8.7e-16 86.7 52 73.1
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 1.5e-15 85.9 45 84.4
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 2.5e-15 85.1 45 82.2
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 2.5e-15 85.1 44 88.6
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 4.3e-15 84.3 53 73.6
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 6.9e-13 77.0 50 74.0
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.0e-12 75.5 50 72.0
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 2.6e-12 75.1 37 91.9
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 1.1e-10 69.7 72 55.6
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.4e-08 62.8 42 64.3
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 3.9e-08 61.2 33 78.8
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 3.9e-08 61.2 33 78.8
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 6.7e-08 60.5 28 92.9
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 3.3e-07 58.2 62 53.2
Mapoly0027s0032 Marchantia polymorpha HOM05D006885 ORTHO05D008606 3.3e-07 58.2 62 56.5


User provided reference genes

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