Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 3.0e-134 481.9 251 100.0
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 4.3e-104 381.7 246 81.3
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 1.3e-84 317.0 215 76.3
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 2.9e-84 315.8 252 65.1
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 1.9e-83 313.2 227 69.6
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 3.5e-82 308.9 246 64.6
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 1.8e-81 306.6 252 64.3
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 3.9e-81 305.4 216 69.0
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 6.7e-81 304.7 259 58.7
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 6.7e-81 304.7 221 68.3
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.5e-80 303.5 252 61.9
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 7.4e-80 301.2 252 62.3
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 9.6e-80 300.8 223 67.7
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 9.6e-80 300.8 229 68.1
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.6e-79 300.1 254 61.8
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.1e-79 299.7 224 68.3
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.8e-79 299.3 224 68.3
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 3.7e-79 298.9 208 73.6
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 4.8e-79 298.5 255 60.8
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 8.1e-79 297.7 257 61.5
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 8.1e-79 297.7 253 62.1
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 8.1e-79 297.7 214 68.2
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.1e-78 297.4 209 71.3
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.8e-78 296.6 247 61.9
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.8e-78 296.6 252 62.7
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.8e-78 296.6 250 61.6
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 2.4e-78 296.2 242 63.6
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 3.1e-78 295.8 250 60.0
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 4.0e-78 295.4 257 60.7
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 5.3e-78 295.0 242 63.6
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 6.9e-78 294.7 244 62.7
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 9.0e-78 294.3 244 62.7
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 1.2e-77 293.9 186 75.3
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.5e-77 293.5 248 61.3
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 1.7e-76 290.0 256 63.7
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 1.7e-76 290.0 220 68.6
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 2.2e-76 289.7 224 65.6
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 2.9e-76 289.3 229 64.6
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 3.8e-76 288.9 251 62.9
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 6.5e-76 288.1 247 58.7
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 6.5e-76 288.1 188 73.9
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 1.4e-75 287.0 191 73.3
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 2.5e-75 286.2 180 73.9
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 3.2e-75 285.8 217 65.9
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 4.2e-75 285.4 243 58.4
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 4.2e-75 285.4 218 65.1
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.5e-75 285.0 269 59.1
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.1e-74 283.1 247 57.9
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 2.7e-74 282.7 222 64.4
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.7e-74 282.7 208 66.3
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 3.5e-74 282.3 246 59.3
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 6.0e-74 281.6 198 70.7
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 1.3e-73 280.4 253 57.7
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.3e-73 279.6 247 57.5
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 8.7e-73 277.7 242 57.4
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 8.7e-73 277.7 242 57.4
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 8.7e-73 277.7 245 59.6
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 1.5e-72 276.9 224 64.3
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 1.5e-72 276.9 219 62.1
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 3.3e-72 275.8 246 59.8
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 7.4e-72 274.6 246 58.5
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 9.6e-72 274.2 226 62.4
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 2.8e-71 272.7 248 57.3
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 4.8e-71 271.9 219 60.7
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 6.2e-71 271.6 215 64.2
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 6.2e-71 271.6 234 57.7
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 1.1e-70 270.8 207 65.7
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.1e-70 270.8 216 62.5
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 2.4e-70 269.6 215 61.4
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 3.1e-70 269.2 248 56.0
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 3.1e-70 269.2 294 53.4
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 4.1e-70 268.9 248 55.6
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 4.1e-70 268.9 194 66.5
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 5.3e-70 268.5 224 62.1
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 1.2e-69 267.3 249 56.2
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 1.5e-69 266.9 262 55.3
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.0e-68 264.2 209 64.6
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.7e-68 263.5 262 57.3
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.9e-68 262.7 215 62.8
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 2.9e-68 262.7 217 62.2
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.9e-68 262.7 226 59.3
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 5.0e-68 261.9 188 65.4
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.1e-67 260.8 222 60.8
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 1.1e-67 260.8 248 55.2
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.4e-67 260.4 220 60.9
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 1.9e-67 260.0 189 66.1
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 1.9e-67 260.0 219 58.4
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 2.7e-66 256.1 219 60.3
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.3e-65 253.8 220 60.0
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 3.0e-65 252.7 223 57.8
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 5.1e-65 251.9 223 57.8
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 2.5e-64 249.6 201 60.2
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 5.7e-64 248.4 199 60.3
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.3e-63 247.3 230 58.3
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.4e-62 243.8 227 56.4
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.4e-62 243.8 227 56.4
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.8e-62 243.4 204 57.4
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 2.6e-61 239.6 145 78.6
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 7.7e-61 238.0 145 78.6
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 3.2e-59 232.6 213 54.5
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 1.5e-56 223.8 242 51.2
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 3.3e-56 222.6 175 63.4
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 4.5e-53 212.2 207 56.5
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 1.8e-46 190.3 134 65.7
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 4.5e-45 185.7 184 48.4
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 4.5e-45 185.7 240 49.2
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 3.8e-44 182.6 167 55.1
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 8.0e-42 174.9 177 44.6
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.3e-39 167.5 171 53.8
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 2.2e-39 166.8 232 37.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.2e-36 156.8 128 66.4
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 6.5e-36 155.2 95 77.9
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 1.5e-35 154.1 159 56.6
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 3.2e-35 152.9 202 40.1
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 8.0e-34 148.3 152 53.3
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.8e-25 118.6 139 51.8
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 5.7e-24 115.5 96 57.3
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 7.5e-24 115.2 68 76.5
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 1.7e-12 77.4 232 27.2
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 2.3e-12 77.0 132 31.8
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 2.6e-08 63.5 139 27.3
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 8.3e-07 58.5 141 30.5


User provided reference genes

Program Settings