Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0312 Erigeron canadensis HOM05D006531 ORTHO05D007905 0.0e+00 1081.6 517 100.0
Lsat_1_v5_gn_4_151921 Lactuca sativa HOM05D006531 ORTHO05D007905 4.4e-204 714.9 507 68.4
HanXRQChr09g0261281 Helianthus annuus HOM05D006531 ORTHO05D007905 9.2e-186 654.1 499 65.9
Dinv05610 Davidia involucrata HOM05D006531 ORTHO05D007905 2.3e-136 490.0 549 48.3
GSVIVG01018883001 Vitis vinifera HOM05D006531 ORTHO05D007905 3.0e-136 489.6 510 51.2
Actinidia35619 Actinidia chinensis HOM05D006531 ORTHO05D007905 5.1e-136 488.8 578 46.0
Haze_03846 Corylus avellana HOM05D006531 ORTHO05D007905 1.2e-132 477.6 571 46.1
Oeu056763.1 Olea europaea HOM05D006531 ORTHO05D007905 1.2e-129 467.6 591 45.2
DCAR_001553 Daucus carota HOM05D006531 ORTHO05D007905 3.9e-128 462.6 561 44.4
Cc07_g10020 Coffea canephora HOM05D006531 ORTHO05D007905 8.8e-128 461.5 577 45.8
MSTRG.23258 Avicennia marina HOM05D006531 ORTHO05D007905 3.1e-125 453.0 577 43.5
Rhsim08G0121800 Rhododendron simsii HOM05D006531 ORTHO05D007905 3.1e-125 453.0 523 46.7
TAR628G0973 Trochodendron aralioides HOM05D006531 ORTHO05D007905 9.1e-125 451.4 601 43.8
COL.COLO4_22012 Corchorus olitorius HOM05D006531 ORTHO05D007905 3.4e-124 449.5 562 44.8
Migut.H02514 Erythranthe guttata HOM05D006531 ORTHO05D007905 3.4e-124 449.5 558 44.1
PGSC0003DMG400022568 Solanum tuberosum HOM05D006531 ORTHO05D007905 7.7e-124 448.4 560 43.4
Sopen03g006510 Solanum pennellii HOM05D006531 ORTHO05D007905 1.3e-123 447.6 558 43.4
Potri.007G019733 Populus trichocarpa HOM05D006531 ORTHO05D007905 1.7e-123 447.2 580 45.2
MD15G1254500 Malus domestica HOM05D006531 ORTHO05D007905 6.5e-123 445.3 552 44.9
Thecc.01G028000 Theobroma cacao HOM05D006531 ORTHO05D007905 1.9e-122 443.7 566 44.0
Duzib187G1823 Durio zibethinus HOM05D006531 ORTHO05D007905 4.2e-122 442.6 563 44.6
QL06p035210 Quercus lobata HOM05D006531 ORTHO05D007905 9.4e-122 441.4 594 42.9
Potri.007G019800 Populus trichocarpa HOM05D006531 ORTHO05D007905 2.1e-121 440.3 581 44.6
vmacro17801 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 6.1e-121 438.7 597 43.0
Gohir.D11G188400 Gossypium hirsutum HOM05D006531 ORTHO05D007905 3.0e-120 436.4 563 43.2
Ciclev10025250m.g Citrus clementina HOM05D006531 ORTHO05D007905 5.2e-120 435.6 578 43.6
CAN.G753.1 Capsicum annuum HOM05D006531 ORTHO05D007905 6.7e-120 435.3 542 41.9
FAN26G0669 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.1e-119 434.5 561 43.7
FAN28G0612 Fragaria x ananassa HOM05D006531 ORTHO05D007905 1.1e-119 434.5 575 43.5
FvH4_1g12740 Fragaria vesca HOM05D006531 ORTHO05D007905 2.0e-119 433.7 563 44.0
Gorai.007G200500 Gossypium raimondii HOM05D006531 ORTHO05D007905 2.6e-119 433.3 563 43.0
FAN19G3073 Fragaria x ananassa HOM05D006531 ORTHO05D007905 5.7e-119 432.2 561 44.0
Solyc03g033720.4 Solanum lycopersicum HOM05D006531 ORTHO05D007905 7.4e-119 431.8 560 42.5
FAN23G2909 Fragaria x ananassa HOM05D006531 ORTHO05D007905 2.8e-118 429.9 556 44.2
Sc07g0000880 Simmondsia chinensis HOM05D006531 ORTHO05D007905 3.7e-118 429.5 513 46.4
RcHm_v2.0_Chr2g0100811 Rosa chinensis HOM05D006531 ORTHO05D007905 2.4e-117 426.8 561 44.0
SalBow8G4669 Salvia bowleyana HOM05D006531 ORTHO05D007905 2.4e-117 426.8 562 43.8
Nitab4.5_0011360g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 3.1e-117 426.4 580 40.0
Cpa.g.sc89.75 Carica papaya HOM05D006531 ORTHO05D007905 2.6e-116 423.3 584 40.6
Lalb_Chr16g0391021 Lupinus albus HOM05D006531 ORTHO05D007905 5.9e-116 422.2 584 40.8
Atru.chr3.665 Acer truncatum HOM05D006531 ORTHO05D007905 1.5e-114 417.5 591 42.5
Atru.BG.101.p Acer truncatum HOM05D006531 ORTHO05D007905 2.5e-114 416.8 496 46.4
EL10As8g23896 Beta vulgaris HOM05D006531 ORTHO05D007905 4.2e-114 416.0 539 42.5
AUR62004101 Chenopodium quinoa HOM05D006531 ORTHO05D007905 5.5e-114 415.6 551 42.8
CANSAT21G1927 Cannabis sativa HOM05D006531 ORTHO05D007905 2.7e-113 413.3 552 40.8
CsaV3_6G046680 Cucumis sativus L. HOM05D006531 ORTHO05D007905 1.8e-112 410.6 553 42.0
PSO675G3692 Papaver somniferum HOM05D006531 ORTHO05D007905 1.8e-112 410.6 585 40.0
MELO3C007866.2 Cucumis melo HOM05D006531 ORTHO05D007905 4.0e-112 409.5 553 41.8
PGR102G2490 Punica granatum HOM05D006531 ORTHO05D007905 8.8e-112 408.3 535 41.7
Nitab4.5_0001289g0010 Nicotiana tabacum HOM05D006531 ORTHO05D007905 1.2e-111 407.9 606 39.4
Prupe.7G159100 Prunus persica HOM05D006531 ORTHO05D007905 2.6e-111 406.8 514 43.8
AUR62007614 Chenopodium quinoa HOM05D006531 ORTHO05D007905 9.7e-111 404.8 551 42.1
arahy.Tifrunner.gnm1.ann1.P54VLQ Arachis hypogaea HOM05D006531 ORTHO05D007905 1.7e-110 404.1 553 42.5
Ca_22340_v3 Cicer arietinum L. HOM05D006531 ORTHO05D007905 4.8e-110 402.5 562 40.9
Sabra07G0016900 Salix brachista HOM05D006531 ORTHO05D007905 4.8e-110 402.5 531 43.5
arahy.Tifrunner.gnm1.ann1.WDDE23 Arachis hypogaea HOM05D006531 ORTHO05D007905 8.2e-110 401.7 562 42.5
Ah.03g141200 Amaranthus hybridus HOM05D006531 ORTHO05D007905 1.4e-109 401.0 539 41.7
Hund14004 Selenicereus undatus HOM05D006531 ORTHO05D007905 2.4e-109 400.2 550 40.9
PSO541G5850 Papaver somniferum HOM05D006531 ORTHO05D007905 3.1e-109 399.8 581 39.6
CARHR147820 Cardamine hirsuta HOM05D006531 ORTHO05D007905 2.7e-108 396.7 514 42.2
AL5G15610 Arabidopsis lyrata HOM05D006531 ORTHO05D007905 5.9e-108 395.6 522 41.6
Sp2g15880 Schrenkiella parvula HOM05D006531 ORTHO05D007905 7.7e-108 395.2 530 41.3
Aqoxy6G01185 Aquilegia oxysepala HOM05D006531 ORTHO05D007905 1.0e-107 394.8 611 38.5
TWI53G1729 Tripterygium wilfordii HOM05D006531 ORTHO05D007905 1.0e-107 394.8 573 41.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 3.8e-107 392.9 586 38.7
Lj2C458T7 Lonicera japonica HOM05D006531 ORTHO05D007905 4.2e-106 389.4 432 48.1
Glyma.02G053000 Glycine max HOM05D006531 ORTHO05D007905 5.5e-106 389.0 575 39.7
AT3G26750 Arabidopsis thaliana HOM05D006531 ORTHO05D007905 9.4e-106 388.3 528 40.9
Gohir.D11G322533 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.2e-105 387.9 561 40.8
Thhalv10003992m.g Eutrema salsugineum HOM05D006531 ORTHO05D007905 1.6e-105 387.5 539 40.4
Psat4g096120 Pisum sativum HOM05D006531 ORTHO05D007905 2.1e-105 387.1 564 39.5
VMungo0251G0240 Vigna mungo HOM05D006531 ORTHO05D007905 2.1e-105 387.1 579 37.8
THA.LOC104819768 Tarenaya hassleriana HOM05D006531 ORTHO05D007905 2.7e-105 386.7 558 39.1
BcaC06g33892 Brassica carinata HOM05D006531 ORTHO05D007905 3.0e-104 383.3 512 42.0
TPR.G21544 Trifolium pratense HOM05D006531 ORTHO05D007905 6.8e-104 382.1 563 40.5
BcaC06g31044 Brassica carinata HOM05D006531 ORTHO05D007905 8.8e-104 381.7 511 41.7
Aa31LG2G5790 Aethionema arabicum HOM05D006531 ORTHO05D007905 2.0e-103 380.6 516 40.9
A06p41760 Brassica napus HOM05D006531 ORTHO05D007905 1.7e-102 377.5 515 42.1
C07p35780 Brassica napus HOM05D006531 ORTHO05D007905 1.7e-102 377.5 513 41.5
BraA06t27096Z Brassica rapa HOM05D006531 ORTHO05D007905 1.7e-102 377.5 515 42.1
BolC7t44097H Brassica oleracea HOM05D006531 ORTHO05D007905 1.4e-101 374.4 513 41.1
ATR0585G072 Amborella trichopoda HOM05D006531 ORTHO05D007905 1.8e-101 374.0 533 38.8
CDE04G2389 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 2.4e-101 373.6 591 38.9
Eucgr.J02379 Eucalyptus grandis HOM05D006531 ORTHO05D007905 4.1e-101 372.9 554 38.8
Medtr8g076860 Medicago truncatula HOM05D006531 ORTHO05D007905 1.6e-100 370.9 561 39.8
Lj4g0004916 Lotus japonicus HOM05D006531 ORTHO05D007905 5.9e-100 369.0 557 40.8
Peaxi162Scf00010g00816 Petunia axillaris HOM05D006531 ORTHO05D007905 1.2e-95 354.8 560 38.2
unitig_0.g471 Utricularia gibba HOM05D006531 ORTHO05D007905 1.1e-93 348.2 523 41.3
SGA_v2.0_scaffold12G06335 Striga asiatica HOM05D006531 ORTHO05D007905 1.5e-87 327.8 366 47.0
CiPaw.07G051400 Carya illinoinensis HOM05D006531 ORTHO05D007905 1.1e-85 321.6 413 44.1
HPP92_011628 Vanilla planifolia HOM05D006531 ORTHO05D007905 1.5e-82 311.2 515 37.3
Manes.02G098000 Manihot esculenta HOM05D006531 ORTHO05D007905 2.8e-81 307.0 415 41.9
Gohir.A11G181766 Gossypium hirsutum HOM05D006531 ORTHO05D007905 1.3e-78 298.1 398 41.7
Os02g0130900 Oryza sativa ssp. japonica HOM05D006531 ORTHO05D007905 1.1e-77 295.0 583 32.8
Carub.0005s0479 Capsella rubella HOM05D006531 ORTHO05D007905 1.6e-76 291.2 395 41.3
Sed0004808 Sechium edule HOM05D006531 ORTHO05D007905 3.3e-74 283.5 395 40.0
Hma1.2p1_3019F.1_g331750 Hydrangea macrophylla HOM05D006531 ORTHO05D007905 2.1e-73 280.8 361 43.2
MBI16_g36847_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 3.4e-71 273.5 444 37.6
Phvul.003G257166 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 1.6e-57 228.0 215 51.6
Zm00001eb209020 Zea mays HOM05D006531 ORTHO05D007905 2.7e-52 210.7 443 32.7
Phvul.003G257232 Phaseolus vulgaris HOM05D006531 ORTHO05D007905 3.0e-51 207.2 250 43.2
Mapoly0011s0081 Marchantia polymorpha HOM05D006531 ORTHO05D007905 8.7e-51 205.7 621 27.1
Nn5g29702 Nelumbo nucifera HOM05D006531 ORTHO05D007905 5.3e-48 196.4 501 28.5
MBI14_g29302_MAGBIO Magnolia biondii HOM05D006531 ORTHO05D007905 1.9e-45 188.0 190 52.1
AagrBONN_evm.TU.Sc2ySwM_368.1148 Anthoceros agrestis HOM05D006531 ORTHO05D007905 2.5e-37 161.0 418 27.8
CSS0007477 Camellia sinensis var. sinensis HOM05D006531 ORTHO05D007905 3.5e-36 157.1 139 56.8
TAR376G0004 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.8e-33 147.5 194 45.4
Zm00001eb231290 Zea mays HOM05D006531 ORTHO05D007905 1.0e-30 139.0 372 29.3
vmacro23089 Vaccinium macrocarpon HOM05D006531 ORTHO05D007905 1.1e-29 135.6 152 48.7
TAR376G0395 Trochodendron aralioides HOM05D006531 ORTHO05D007905 2.2e-25 121.3 144 44.4
Carub.0006s2991 Capsella rubella HOM05D006531 ORTHO05D007905 2.8e-25 120.9 336 28.6
SEGI_05601 Sequoiadendron giganteum HOM05D006531 ORTHO05D007905 1.0e-19 102.4 359 25.3
Pp3c2_6980 Physcomitrium patens HOM05D006531 ORTHO05D007905 1.5e-18 98.6 220 31.4
Lj2g0008134 Lotus japonicus HOM05D006531 ORTHO05D007905 5.7e-18 96.7 145 40.0
Sc07g0000850 Simmondsia chinensis HOM05D006531 ORTHO05D007905 2.2e-09 68.2 79 46.8
CDE06G1394 Ceratophyllum demersum HOM05D006531 ORTHO05D007905 3.1e-08 64.3 78 44.9
RcHm_v2.0_Chr4g0390451 Rosa chinensis HOM05D006531 ORTHO05D007905 4.1e-08 63.9 43 72.1
MSTRG.2488 Avicennia marina HOM05D006531 ORTHO05D007905 1.7e-06 58.5 76 44.7


User provided reference genes

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