Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 7.4e-87 323.9 175 100.0
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 3.8e-51 205.3 180 67.8
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 6.5e-51 204.5 172 71.5
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 5.5e-50 201.4 181 66.9
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 9.4e-50 200.7 176 68.8
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 2.2e-46 189.5 181 62.4
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 1.4e-45 186.8 180 62.2
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.4e-45 186.8 180 62.2
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 7.0e-45 184.5 177 63.3
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 7.0e-45 184.5 173 65.9
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 9.1e-45 184.1 177 63.8
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 1.2e-44 183.7 180 61.7
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 1.6e-44 183.3 182 63.2
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 2.7e-44 182.6 179 64.2
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.7e-43 179.9 179 59.8
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 3.8e-43 178.7 186 58.1
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 8.6e-43 177.6 183 59.6
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 2.5e-42 176.0 188 59.0
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 2.5e-42 176.0 176 61.4
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 2.5e-42 176.0 180 61.1
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 3.3e-42 175.6 181 61.3
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.2e-42 175.3 178 64.6
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 4.2e-42 175.3 179 59.2
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 4.2e-42 175.3 175 60.6
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 7.2e-42 174.5 181 60.2
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 1.6e-41 173.3 188 58.5
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 1.6e-41 173.3 175 60.6
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 2.1e-41 172.9 176 59.7
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 2.8e-41 172.6 179 61.5
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 3.6e-41 172.2 181 58.0
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 4.7e-41 171.8 182 63.2
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 6.1e-41 171.4 181 58.6
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.0e-40 170.6 180 59.4
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 1.4e-40 170.2 181 57.5
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 2.3e-40 169.5 182 61.5
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 4.0e-40 168.7 179 57.5
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.0e-40 168.7 179 57.5
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 6.8e-40 167.9 178 59.6
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 5.7e-39 164.9 179 55.9
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 7.5e-39 164.5 178 59.6
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 9.8e-39 164.1 179 58.1
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 9.8e-39 164.1 178 61.2
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 9.8e-39 164.1 181 55.8
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.3e-38 163.7 181 56.4
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 1.7e-38 163.3 181 54.7
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.2e-38 162.9 190 56.8
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.4e-37 160.2 190 54.2
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 5.4e-37 158.3 179 55.3
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 7.0e-37 157.9 180 57.2
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 1.6e-36 156.8 181 57.5
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 1.6e-36 156.8 181 55.8
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 2.7e-36 156.0 180 53.9
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.6e-36 155.2 179 54.7
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.3e-35 153.7 140 65.0
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.1e-34 150.6 248 46.0
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.9e-34 149.8 178 55.1
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 1.9e-34 149.8 175 53.7
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 4.3e-34 148.7 174 58.0
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 9.5e-34 147.5 190 52.6
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 9.5e-34 147.5 183 54.6
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.2e-33 147.1 173 54.3
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 3.6e-33 145.6 181 53.6
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 6.2e-33 144.8 175 51.4
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.8e-32 143.3 180 53.9
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 4.0e-32 142.1 182 50.5
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.2e-31 140.6 186 51.6
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.5e-31 140.2 181 53.0
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 2.0e-31 139.8 276 39.5
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 9.8e-31 137.5 185 53.5
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 1.3e-30 137.1 183 53.0
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 2.2e-30 136.3 175 53.7
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 6.4e-30 134.8 180 52.2
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.4e-29 133.7 174 51.1
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.4e-29 133.7 152 55.3
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 7.0e-29 131.3 173 49.7
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 9.2e-29 131.0 188 47.3
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.6e-28 130.2 184 48.9
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 1.6e-28 130.2 201 46.8
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 2.0e-28 129.8 183 48.1
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 2.7e-28 129.4 182 50.0
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 2.7e-28 129.4 173 49.7
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 2.7e-28 129.4 173 49.7
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 4.6e-28 128.6 184 48.4
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 1.7e-27 126.7 185 47.0
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 1.7e-27 126.7 98 75.5
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 3.0e-27 125.9 175 48.6
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 1.9e-26 123.2 170 44.7
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 2.5e-26 122.9 152 50.0
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 9.5e-26 120.9 219 42.5
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 2.8e-25 119.4 167 48.5
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 3.1e-24 115.9 231 40.3
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 4.0e-24 115.5 142 56.3
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 6.8e-24 114.8 182 47.8
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 6.8e-24 114.8 156 52.6
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 1.2e-23 114.0 167 46.1
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 1.2e-23 114.0 170 48.8
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 4.4e-23 112.1 178 41.0
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 5.8e-23 111.7 168 47.6
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 5.8e-23 111.7 168 47.6
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 3.7e-22 109.0 148 52.0
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 8.3e-22 107.8 129 58.1
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 2.1e-20 103.2 174 47.7
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 4.6e-20 102.1 169 43.2
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.6e-17 93.6 98 58.2
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.1e-17 93.2 98 57.1
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 3.6e-17 92.4 183 41.5
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 3.7e-14 82.4 80 60.0
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 5.4e-13 78.6 75 61.3
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.2e-12 77.4 140 47.1
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.2e-12 77.4 140 47.1
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 4.6e-12 75.5 72 61.1
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 3.9e-11 72.4 186 36.0
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 5.6e-10 68.6 170 35.3
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 1.2e-09 67.4 126 45.2
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 4.7e-09 65.5 81 49.4
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 1.1e-08 64.3 56 57.1
Zm00001eb234510 Zea mays HOM05D006676 ORTHO05D008394 2.2e-06 56.6 64 48.4


User provided reference genes

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