Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ECA039G0003 Erigeron canadensis HOM05D006493 ORTHO05D011802 1.4e-150 536.2 264 100.0
Lsat_1_v5_gn_1_2660 Lactuca sativa HOM05D006493 ORTHO05D009864 1.2e-80 303.9 334 55.1
Lsat_1_v5_gn_0_38160 Lactuca sativa HOM05D006493 ORTHO05D013683 8.6e-71 271.2 148 93.2
Nitab4.5_0008300g0020 Nicotiana tabacum HOM05D006493 ORTHO05D013683 9.0e-36 154.8 141 63.8
Peaxi162Scf00489g00026 Petunia axillaris HOM05D006493 ORTHO05D011802 4.5e-35 152.5 72 98.6
arahy.Tifrunner.gnm1.ann1.ZF89K8 Arachis hypogaea HOM05D006493 ORTHO05D009864 9.9e-35 151.4 272 42.3
Gorai.001G164600 Gossypium raimondii HOM05D006493 ORTHO05D009864 1.7e-31 140.6 284 37.0
CsaV3_UNG208130 Cucumis sativus L. HOM05D006493 ORTHO05D009864 5.6e-30 135.6 387 33.3
Ah.10g028490 Amaranthus hybridus HOM05D006493 ORTHO05D009864 1.1e-28 131.3 202 43.6
Nitab4.5_0000055g0340 Nicotiana tabacum HOM05D006493 ORTHO05D011802 1.8e-28 130.6 68 89.7
Solyc00g500313.1 Solanum lycopersicum HOM05D006493 ORTHO05D011802 9.0e-28 128.3 62 98.4
Nitab4.5_0000593g0190 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.5e-27 127.5 142 54.2
BolSC28t60370H Brassica oleracea HOM05D006493 ORTHO05D011802 3.5e-24 116.3 59 93.2
BraSC48t46239Z Brassica rapa HOM05D006493 ORTHO05D011802 3.5e-24 116.3 59 93.2
BraSC48t46328Z Brassica rapa HOM05D006493 ORTHO05D011802 3.5e-24 116.3 59 93.2
arahy.Tifrunner.gnm1.ann1.SBT9NF Arachis hypogaea HOM05D006493 ORTHO05D013683 3.9e-23 112.8 106 64.2
arahy.Tifrunner.gnm1.ann1.U0KQ91 Arachis hypogaea HOM05D006493 ORTHO05D013683 3.9e-23 112.8 106 64.2
Nn3g20071 Nelumbo nucifera HOM05D008194 ORTHO05D020893 3.3e-22 109.8 60 88.3
Aa31csc239G90 Aethionema arabicum HOM05D006493 ORTHO05D009864 6.9e-20 102.1 181 40.9
Nitab4.5_0000497g0100 Nicotiana tabacum HOM05D006493 ORTHO05D011802 6.9e-20 102.1 49 98.0
Nitab4.5_0000028g0270 Nicotiana tabacum HOM05D008194 ORTHO05D020893 1.5e-19 100.9 128 53.9
Nitab4.5_0000172g1490 Nicotiana tabacum HOM05D006493 ORTHO05D011802 2.6e-19 100.1 57 84.2
RcHm_v2.0_MTg0498511 Rosa chinensis HOM05D006493 ORTHO05D009864 2.6e-19 100.1 61 85.2
Peaxi162Scf00286g00018 Petunia axillaris HOM05D006493 ORTHO05D009864 3.4e-19 99.8 52 92.3
Lj2C1221T62 Lonicera japonica HOM05D006493 ORTHO05D009864 1.0e-18 98.2 52 90.4
Lj2C1230T74 Lonicera japonica HOM05D006493 ORTHO05D009864 1.0e-18 98.2 52 90.4
Lalb_Chr00c29g0407921 Lupinus albus HOM05D006493 ORTHO05D009864 1.0e-18 98.2 51 92.2
Hund29781 Selenicereus undatus HOM05D006493 ORTHO05D009864 1.0e-18 98.2 52 90.4
AUR62042325 Chenopodium quinoa HOM05D006493 ORTHO05D009864 1.7e-18 97.4 51 92.2
AUR62042341 Chenopodium quinoa HOM05D006493 ORTHO05D009864 1.7e-18 97.4 51 92.2
LjContig00439g0012697 Lotus japonicus HOM05D006493 ORTHO05D009864 2.9e-18 96.7 51 90.2
LjContig00439g0026284 Lotus japonicus HOM05D006493 ORTHO05D009864 2.9e-18 96.7 51 90.2
Psat7g093520 Pisum sativum HOM05D006493 ORTHO05D009864 2.9e-18 96.7 51 90.2
TPR.G39758 Trifolium pratense HOM05D006493 ORTHO05D009864 2.9e-18 96.7 51 90.2
AT2G07689 Arabidopsis thaliana HOM05D006493 ORTHO05D009864 6.5e-18 95.5 52 90.4
Solyc00g125990.1 Solanum lycopersicum HOM05D006493 ORTHO05D009864 8.4e-18 95.1 52 90.4
PGSC0003DMG400021388 Solanum tuberosum HOM05D006493 ORTHO05D009864 8.4e-18 95.1 52 90.4
Hma1.2p1_0110F.1_g052985 Hydrangea macrophylla HOM05D006493 ORTHO05D009864 1.1e-17 94.7 51 92.2
arahy.Tifrunner.gnm1.ann1.G2UG47 Arachis hypogaea HOM05D006493 ORTHO05D009864 1.9e-17 94.0 48 95.8
arahy.Tifrunner.gnm1.ann1.PL6HV0 Arachis hypogaea HOM05D006493 ORTHO05D009864 1.9e-17 94.0 48 95.8
arahy.Tifrunner.gnm1.ann1.REK9CK Arachis hypogaea HOM05D006493 ORTHO05D009864 1.9e-17 94.0 48 95.8
A04p09370 Brassica napus HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 88.5
BolSC28t60313H Brassica oleracea HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 88.5
BraSC159t45728Z Brassica rapa HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 88.5
BraSC48t46238Z Brassica rapa HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 88.5
CARHR283510 Cardamine hirsuta HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 88.5
CARHR288180 Cardamine hirsuta HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 88.5
COL.COLO4_07959 Corchorus olitorius HOM05D006493 ORTHO05D009864 1.9e-17 94.0 52 84.6
Lsat_1_v5_gn_0_38180 Lactuca sativa HOM05D006493 ORTHO05D009864 2.5e-17 93.6 52 88.5
Lsat_1_v5_gn_5_28201 Lactuca sativa HOM05D006493 ORTHO05D009864 2.5e-17 93.6 52 88.5
Potri.007G062522 Populus trichocarpa HOM05D006493 ORTHO05D009864 2.5e-17 93.6 52 88.5
RhsimMtG0006700 Rhododendron simsii HOM05D006493 ORTHO05D009864 2.5e-17 93.6 52 88.5
SabraMtG0004500 Salix brachista HOM05D006493 ORTHO05D009864 2.5e-17 93.6 52 88.5
DCAR_028366 Daucus carota HOM05D006493 ORTHO05D009864 3.2e-17 93.2 52 86.5
HanXRQMTg0579071 Helianthus annuus HOM05D006493 ORTHO05D009864 3.2e-17 93.2 52 86.5
Sp3g25780 Schrenkiella parvula HOM05D006493 ORTHO05D009864 4.2e-17 92.8 48 93.8
Sed0007165 Sechium edule HOM05D006493 ORTHO05D009864 4.2e-17 92.8 52 88.5
arahy.Tifrunner.gnm1.ann1.FPLM06 Arachis hypogaea HOM05D006493 ORTHO05D009864 7.1e-17 92.0 48 93.8
Nitab4.5_0000055g0330 Nicotiana tabacum HOM05D006493 ORTHO05D009864 9.3e-17 91.7 52 84.6
CAN.G1159.4 Capsicum annuum HOM05D006493 ORTHO05D009864 2.1e-16 90.5 52 84.6
Nitab4.5_0000172g1790 Nicotiana tabacum HOM05D008194 ORTHO05D010811 2.7e-16 90.1 67 71.6
Zm00001eb436160 Zea mays HOM05D006493 ORTHO05D009864 2.7e-16 90.1 46 95.7
SGA_v2.0_scaffold255G45360 Striga asiatica HOM05D006493 ORTHO05D009864 4.6e-16 89.4 52 86.5
unitig_87.g27995 Utricularia gibba HOM05D006493 ORTHO05D009864 4.6e-16 89.4 51 86.3
HanXRQChr16g0507141 Helianthus annuus HOM05D006493 ORTHO05D009864 7.9e-16 88.6 51 84.3
HanXRQChr09g0256301 Helianthus annuus HOM05D006493 ORTHO05D009864 1.8e-15 87.4 46 91.3
Solyc00g500314.1 Solanum lycopersicum HOM05D006493 ORTHO05D009864 3.9e-15 86.3 45 93.3
Nitab4.5_0000172g1600 Nicotiana tabacum HOM05D006493 ORTHO05D009864 5.1e-15 85.9 52 84.6
Aqoxy1G02970 Aquilegia oxysepala HOM05D006493 ORTHO05D009864 6.7e-15 85.5 46 93.5
CDE02G4378 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 6.7e-15 85.5 46 93.5
CDE02G4414 Ceratophyllum demersum HOM05D006493 ORTHO05D009864 6.7e-15 85.5 46 93.5
Nn1g10151 Nelumbo nucifera HOM05D006493 ORTHO05D009864 6.7e-15 85.5 46 93.5
HanXRQChr07g0188931 Helianthus annuus HOM05D006493 ORTHO05D009864 3.3e-14 83.2 52 76.9
HanXRQChr07g0188941 Helianthus annuus HOM05D006493 ORTHO05D009864 3.3e-14 83.2 52 76.9
Nitab4.5_0000172g1540 Nicotiana tabacum HOM05D006493 ORTHO05D009864 4.3e-14 82.8 46 87.0
Peaxi162Scf00202g00068 Petunia axillaris HOM05D008194 ORTHO05D020893 4.3e-14 82.8 68 64.7
Nitab4.5_0000172g0060 Nicotiana tabacum HOM05D006493 ORTHO05D009864 5.7e-14 82.4 49 81.6
Nitab4.5_0000085g0150 Nicotiana tabacum HOM05D006493 ORTHO05D009864 1.3e-13 81.3 51 80.4
SalBow1G2520 Salvia bowleyana HOM05D006493 ORTHO05D009864 1.3e-13 81.3 51 82.4
TWI79G1044 Tripterygium wilfordii HOM05D006493 ORTHO05D009864 2.8e-13 80.1 51 74.5
PGR069G0009 Punica granatum HOM05D006493 ORTHO05D009864 3.7e-13 79.7 47 85.1
Nn5g30924 Nelumbo nucifera HOM05D006493 ORTHO05D013683 1.8e-12 77.4 42 88.1
Nitab4.5_0000085g0140 Nicotiana tabacum HOM05D009629 ORTHO05D012066 4.1e-12 76.3 57 70.2
Nitab4.5_0000172g1560 Nicotiana tabacum HOM05D008194 ORTHO05D013683 2.2e-10 70.5 48 75.0
Nitab4.5_0000172g1810 Nicotiana tabacum HOM05D006493 ORTHO05D009864 3.8e-10 69.7 48 70.8
Nitab4.5_0000172g1580 Nicotiana tabacum HOM05D008194 ORTHO05D013683 8.5e-10 68.6 45 73.3
Nitab4.5_0008300g0030 Nicotiana tabacum HOM05D006493 ORTHO05D009864 8.5e-10 68.6 47 74.5
Solyc00g125980.1 Solanum lycopersicum HOM05D008194 ORTHO05D020893 8.5e-10 68.6 57 64.9
PGSC0003DMG400003375 Solanum tuberosum HOM05D008194 ORTHO05D020893 8.5e-10 68.6 57 64.9
SHI34943 Sapria himalayana HOM05D006493 ORTHO05D009864 2.1e-08 63.9 75 52.0
Lsat_1_v5_gn_3_72900 Lactuca sativa HOM05D006493 ORTHO05D009864 2.7e-08 63.5 31 96.8
Aa31csc239G70 Aethionema arabicum HOM05D008194 ORTHO05D010811 3.0e-07 60.1 28 96.4
Thhalv10015951m.g Eutrema salsugineum HOM05D006493 ORTHO05D009864 3.0e-07 60.1 28 100.0
GSVIVG01007203001 Vitis vinifera HOM05D006493 ORTHO05D009864 3.0e-07 60.1 28 100.0
TPR.G14532 Trifolium pratense HOM05D006493 ORTHO05D011802 8.7e-07 58.5 57 54.4
Nitab4.5_0001303g0120 Nicotiana tabacum HOM05D008194 ORTHO05D013683 5.7e-06 55.8 82 43.9
CsaV3_UNG208140 Cucumis sativus L. HOM05D006493 ORTHO05D011802 9.7e-06 55.1 28 92.9


User provided reference genes

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