Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 4.2e-90 334.7 174 100.0
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.7e-73 278.9 178 81.5
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 2.7e-73 278.9 178 81.5
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 6.7e-72 274.2 178 82.6
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 8.7e-72 273.9 172 80.8
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 2.4e-69 265.8 169 80.5
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 5.9e-68 261.2 148 93.9
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 9.3e-66 253.8 152 90.8
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 1.2e-65 253.4 178 76.4
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 2.2e-54 216.1 184 62.0
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.2e-54 216.1 185 61.6
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 5.9e-52 208.0 184 62.5
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 3.0e-48 195.7 179 59.8
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.9e-48 195.3 175 60.0
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 1.1e-47 193.7 175 58.9
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 4.4e-47 191.8 184 58.7
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 7.4e-47 191.0 186 59.7
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 7.4e-47 191.0 177 58.2
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 9.7e-47 190.7 164 61.6
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.4e-45 186.8 179 59.2
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 2.4e-45 186.0 182 59.9
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 4.1e-45 185.3 164 61.6
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 7.0e-45 184.5 156 63.5
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 3.5e-44 182.2 181 56.4
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.0e-43 180.6 180 57.8
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 5.0e-43 178.3 172 55.2
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 1.9e-42 176.4 172 56.4
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.5e-42 176.0 174 55.7
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.5e-42 176.0 179 56.4
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 3.2e-42 175.6 171 56.1
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 4.2e-42 175.3 180 54.4
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 5.5e-42 174.9 175 53.1
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 9.4e-42 174.1 164 56.7
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 9.4e-42 174.1 185 56.8
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 2.7e-41 172.6 187 54.5
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 2.7e-41 172.6 161 57.1
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 3.6e-41 172.2 192 53.1
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 4.7e-41 171.8 199 50.8
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 8.0e-41 171.0 180 53.9
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 1.4e-40 170.2 200 50.5
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.3e-40 169.5 199 53.8
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 2.3e-40 169.5 154 59.7
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 2.3e-40 169.5 176 53.4
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 2.6e-39 166.0 174 52.3
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 3.3e-39 165.6 161 55.9
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 7.5e-39 164.5 157 56.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.3e-38 163.7 199 52.3
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.3e-38 163.7 174 55.2
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 1.3e-38 163.7 176 54.0
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.7e-38 163.3 197 52.3
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.7e-38 163.3 167 52.1
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.2e-38 162.9 194 52.6
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 2.8e-38 162.5 162 58.6
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 4.8e-38 161.8 157 52.9
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 4.8e-38 161.8 157 52.9
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 8.2e-38 161.0 147 59.2
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 1.4e-37 160.2 150 52.7
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.4e-37 160.2 153 54.2
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.8e-37 159.8 183 49.2
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 2.4e-37 159.5 174 52.3
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 3.1e-37 159.1 152 58.6
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.1e-37 159.1 153 51.6
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.1e-37 159.1 153 51.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 4.1e-37 158.7 154 53.2
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 4.1e-37 158.7 151 51.7
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 4.1e-37 158.7 157 52.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 4.1e-37 158.7 154 51.3
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 5.3e-37 158.3 145 60.7
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 9.1e-37 157.5 150 52.7
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 1.6e-36 156.8 157 52.2
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 1.6e-36 156.8 157 52.2
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 3.5e-36 155.6 178 51.7
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 4.5e-36 155.2 146 59.6
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 5.9e-36 154.8 181 51.9
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 5.9e-36 154.8 156 55.1
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 7.7e-36 154.5 150 58.7
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.3e-35 153.7 182 50.0
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.7e-35 153.3 181 50.8
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 2.9e-35 152.5 149 52.3
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 2.9e-35 152.5 161 51.6
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 3.2e-34 149.1 157 49.0
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 4.2e-34 148.7 161 47.2
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 5.5e-34 148.3 191 47.1
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 2.7e-33 146.0 158 46.8
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 8.0e-33 144.4 180 46.7
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 6.8e-32 141.4 172 50.6
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 6.8e-32 141.4 170 50.0
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 8.8e-32 141.0 156 53.2
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 8.8e-32 141.0 179 50.3
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 1.5e-31 140.2 147 55.8
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 4.4e-31 138.7 118 59.3
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 1.7e-30 136.7 139 52.5
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 2.8e-30 136.0 147 54.4
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 4.8e-30 135.2 140 55.7
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 6.3e-30 134.8 176 46.0
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 1.4e-29 133.7 126 59.5
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 9.1e-29 131.0 182 44.0
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.6e-28 130.2 150 54.0
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 4.5e-28 128.6 178 43.3
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.5e-27 124.8 128 57.0
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 1.1e-26 124.0 121 57.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.9e-26 123.2 128 53.9
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.9e-26 123.2 109 53.2
Duzib138G1646 Durio zibethinus HOM05D006977 ORTHO05D008738 7.2e-26 121.3 94 70.2
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 1.2e-25 120.6 113 58.4
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.4e-24 117.1 120 53.3
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 9.8e-23 110.9 99 59.6
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.7e-20 102.8 81 58.0
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 7.8e-20 101.3 95 55.8
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 4.6e-12 75.5 126 38.9
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 1.1e-10 70.9 164 34.1
CDE04G2744 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 3.7e-06 55.8 65 46.2


User provided reference genes

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